Protein–RNA interactions for Protein: Q5TAT6

COL13A1, Collagen alpha-1(XIII) chain, humanhuman

Predicted RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1Q5TAT6 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC25.69■■□□□ 1.7
COL13A1Q5TAT6 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC25.68■■□□□ 1.7
COL13A1Q5TAT6 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
COL13A1Q5TAT6 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC25.68■■□□□ 1.7
COL13A1Q5TAT6 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC25.68■■□□□ 1.7
COL13A1Q5TAT6 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC25.68■■□□□ 1.7
COL13A1Q5TAT6 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
COL13A1Q5TAT6 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC25.68■■□□□ 1.7
COL13A1Q5TAT6 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC25.68■■□□□ 1.7
COL13A1Q5TAT6 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
COL13A1Q5TAT6 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
COL13A1Q5TAT6 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC25.67■■□□□ 1.7
COL13A1Q5TAT6 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC25.67■■□□□ 1.7
COL13A1Q5TAT6 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC25.67■■□□□ 1.7
COL13A1Q5TAT6 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
COL13A1Q5TAT6 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC25.67■■□□□ 1.7
COL13A1Q5TAT6 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC25.66■■□□□ 1.7
COL13A1Q5TAT6 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC25.66■■□□□ 1.7
COL13A1Q5TAT6 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
COL13A1Q5TAT6 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC25.66■■□□□ 1.7
COL13A1Q5TAT6 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
COL13A1Q5TAT6 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC25.66■■□□□ 1.7
COL13A1Q5TAT6 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC25.66■■□□□ 1.7
COL13A1Q5TAT6 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
COL13A1Q5TAT6 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC25.65■■□□□ 1.7
COL13A1Q5TAT6 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
COL13A1Q5TAT6 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC25.65■■□□□ 1.7
COL13A1Q5TAT6 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC25.65■■□□□ 1.7
COL13A1Q5TAT6 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
COL13A1Q5TAT6 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC25.65■■□□□ 1.7
COL13A1Q5TAT6 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC25.65■■□□□ 1.7
COL13A1Q5TAT6 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
COL13A1Q5TAT6 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
COL13A1Q5TAT6 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
COL13A1Q5TAT6 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
COL13A1Q5TAT6 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC25.65■■□□□ 1.7
COL13A1Q5TAT6 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
COL13A1Q5TAT6 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
COL13A1Q5TAT6 MIPEPP3-201ENST00000412105 444 ntBASIC25.64■■□□□ 1.7
COL13A1Q5TAT6 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC25.64■■□□□ 1.7
COL13A1Q5TAT6 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC25.64■■□□□ 1.7
COL13A1Q5TAT6 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
COL13A1Q5TAT6 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC25.64■■□□□ 1.7
COL13A1Q5TAT6 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC25.63■■□□□ 1.69
COL13A1Q5TAT6 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC25.63■■□□□ 1.69
COL13A1Q5TAT6 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC25.63■■□□□ 1.69
COL13A1Q5TAT6 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
COL13A1Q5TAT6 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC25.62■■□□□ 1.69
COL13A1Q5TAT6 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC25.62■■□□□ 1.69
COL13A1Q5TAT6 RCN1P1-201ENST00000400413 996 ntBASIC25.62■■□□□ 1.69
COL13A1Q5TAT6 SNORA78-201ENST00000459373 127 ntBASIC25.62■■□□□ 1.69
COL13A1Q5TAT6 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
COL13A1Q5TAT6 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC25.62■■□□□ 1.69
COL13A1Q5TAT6 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
COL13A1Q5TAT6 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC25.62■■□□□ 1.69
COL13A1Q5TAT6 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC25.61■■□□□ 1.69
COL13A1Q5TAT6 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
COL13A1Q5TAT6 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
COL13A1Q5TAT6 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC25.61■■□□□ 1.69
COL13A1Q5TAT6 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC25.61■■□□□ 1.69
COL13A1Q5TAT6 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC25.61■■□□□ 1.69
COL13A1Q5TAT6 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC25.61■■□□□ 1.69
COL13A1Q5TAT6 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
COL13A1Q5TAT6 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
COL13A1Q5TAT6 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
COL13A1Q5TAT6 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC25.61■■□□□ 1.69
COL13A1Q5TAT6 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC25.61■■□□□ 1.69
COL13A1Q5TAT6 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC25.6■■□□□ 1.69
COL13A1Q5TAT6 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC25.6■■□□□ 1.69
COL13A1Q5TAT6 AC133637.1-201ENST00000624115 1537 ntBASIC25.6■■□□□ 1.69
COL13A1Q5TAT6 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
COL13A1Q5TAT6 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
COL13A1Q5TAT6 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC25.6■■□□□ 1.69
COL13A1Q5TAT6 GAS7-202ENST00000396115 929 ntTSL 5 BASIC25.6■■□□□ 1.69
COL13A1Q5TAT6 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC25.6■■□□□ 1.69
COL13A1Q5TAT6 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC25.6■■□□□ 1.69
COL13A1Q5TAT6 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC25.6■■□□□ 1.69
COL13A1Q5TAT6 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
COL13A1Q5TAT6 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
COL13A1Q5TAT6 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC25.59■■□□□ 1.69
COL13A1Q5TAT6 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC25.59■■□□□ 1.69
COL13A1Q5TAT6 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
COL13A1Q5TAT6 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
COL13A1Q5TAT6 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC25.59■■□□□ 1.69
COL13A1Q5TAT6 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC25.59■■□□□ 1.69
COL13A1Q5TAT6 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC25.59■■□□□ 1.69
COL13A1Q5TAT6 AC073648.6-201ENST00000641589 218 ntBASIC25.59■■□□□ 1.69
COL13A1Q5TAT6 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
COL13A1Q5TAT6 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
COL13A1Q5TAT6 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC25.58■■□□□ 1.69
COL13A1Q5TAT6 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC25.58■■□□□ 1.69
COL13A1Q5TAT6 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
COL13A1Q5TAT6 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC25.58■■□□□ 1.68
COL13A1Q5TAT6 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC25.57■■□□□ 1.68
COL13A1Q5TAT6 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC25.57■■□□□ 1.68
COL13A1Q5TAT6 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC25.57■■□□□ 1.68
COL13A1Q5TAT6 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC25.57■■□□□ 1.68
COL13A1Q5TAT6 ABHD17AP6-201ENST00000458502 1044 ntBASIC25.57■■□□□ 1.68
COL13A1Q5TAT6 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC25.57■■□□□ 1.68
COL13A1Q5TAT6 BX088651.1-201ENST00000540551 451 ntBASIC25.57■■□□□ 1.68
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms