Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LINC00242Q5T6M2 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LINC00242Q5T6M2 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC15.19■□□□□ 0.02
LINC00242Q5T6M2 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LINC00242Q5T6M2 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LINC00242Q5T6M2 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
LINC00242Q5T6M2 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC15.19■□□□□ 0.02
LINC00242Q5T6M2 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LINC00242Q5T6M2 AC022616.5-201ENST00000518796 181 ntBASIC15.19■□□□□ 0.02
LINC00242Q5T6M2 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC15.19■□□□□ 0.02
LINC00242Q5T6M2 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC15.19■□□□□ 0.02
LINC00242Q5T6M2 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LINC00242Q5T6M2 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
LINC00242Q5T6M2 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LINC00242Q5T6M2 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LINC00242Q5T6M2 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
LINC00242Q5T6M2 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LINC00242Q5T6M2 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LINC00242Q5T6M2 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LINC00242Q5T6M2 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LINC00242Q5T6M2 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC15.18■□□□□ 0.02
LINC00242Q5T6M2 AL024507.2-201ENST00000606070 2574 ntBASIC15.18■□□□□ 0.02
LINC00242Q5T6M2 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC15.18■□□□□ 0.02
LINC00242Q5T6M2 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LINC00242Q5T6M2 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC15.18■□□□□ 0.02
LINC00242Q5T6M2 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC15.18■□□□□ 0.02
LINC00242Q5T6M2 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC15.18■□□□□ 0.02
LINC00242Q5T6M2 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
LINC00242Q5T6M2 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
LINC00242Q5T6M2 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC15.18■□□□□ 0.02
LINC00242Q5T6M2 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
LINC00242Q5T6M2 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
LINC00242Q5T6M2 FBXW4P1-201ENST00000426721 2239 ntBASIC15.17■□□□□ 0.02
LINC00242Q5T6M2 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
LINC00242Q5T6M2 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
LINC00242Q5T6M2 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
LINC00242Q5T6M2 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC15.17■□□□□ 0.02
LINC00242Q5T6M2 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC15.17■□□□□ 0.02
LINC00242Q5T6M2 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC15.17■□□□□ 0.02
LINC00242Q5T6M2 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC15.17■□□□□ 0.02
LINC00242Q5T6M2 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
LINC00242Q5T6M2 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
LINC00242Q5T6M2 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC15.17■□□□□ 0.02
LINC00242Q5T6M2 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC15.17■□□□□ 0.02
LINC00242Q5T6M2 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
LINC00242Q5T6M2 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC15.17■□□□□ 0.02
LINC00242Q5T6M2 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
LINC00242Q5T6M2 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC15.17■□□□□ 0.02
LINC00242Q5T6M2 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LINC00242Q5T6M2 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LINC00242Q5T6M2 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC15.17■□□□□ 0.02
LINC00242Q5T6M2 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LINC00242Q5T6M2 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC15.16■□□□□ 0.02
LINC00242Q5T6M2 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC15.16■□□□□ 0.02
LINC00242Q5T6M2 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LINC00242Q5T6M2 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LINC00242Q5T6M2 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LINC00242Q5T6M2 HYI-210ENST00000486909 905 ntTSL 5 BASIC15.16■□□□□ 0.02
LINC00242Q5T6M2 ABHD17AP3-201ENST00000503096 1137 ntBASIC15.16■□□□□ 0.02
LINC00242Q5T6M2 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC15.16■□□□□ 0.02
LINC00242Q5T6M2 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LINC00242Q5T6M2 AC019171.1-201ENST00000601251 1056 ntBASIC15.16■□□□□ 0.02
LINC00242Q5T6M2 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC15.16■□□□□ 0.02
LINC00242Q5T6M2 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
LINC00242Q5T6M2 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
LINC00242Q5T6M2 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC15.16■□□□□ 0.02
LINC00242Q5T6M2 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
LINC00242Q5T6M2 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC15.15■□□□□ 0.02
LINC00242Q5T6M2 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
LINC00242Q5T6M2 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC15.15■□□□□ 0.02
LINC00242Q5T6M2 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC15.15■□□□□ 0.02
LINC00242Q5T6M2 AC087742.1-201ENST00000575880 1738 ntBASIC15.15■□□□□ 0.02
LINC00242Q5T6M2 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC15.15■□□□□ 0.02
LINC00242Q5T6M2 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
LINC00242Q5T6M2 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
LINC00242Q5T6M2 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LINC00242Q5T6M2 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
LINC00242Q5T6M2 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC15.15■□□□□ 0.02
LINC00242Q5T6M2 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC15.15■□□□□ 0.02
LINC00242Q5T6M2 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
LINC00242Q5T6M2 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
LINC00242Q5T6M2 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
LINC00242Q5T6M2 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
LINC00242Q5T6M2 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LINC00242Q5T6M2 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
LINC00242Q5T6M2 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LINC00242Q5T6M2 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LINC00242Q5T6M2 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC15.14■□□□□ 0.01
LINC00242Q5T6M2 USF2-207ENST00000595068 1612 ntTSL 5 BASIC15.14■□□□□ 0.01
LINC00242Q5T6M2 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
LINC00242Q5T6M2 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
LINC00242Q5T6M2 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
LINC00242Q5T6M2 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LINC00242Q5T6M2 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
LINC00242Q5T6M2 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
LINC00242Q5T6M2 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LINC00242Q5T6M2 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC15.14■□□□□ 0.01
LINC00242Q5T6M2 AC129492.7-201ENST00000622992 756 ntBASIC15.14■□□□□ 0.01
LINC00242Q5T6M2 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC15.14■□□□□ 0.01
LINC00242Q5T6M2 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms