Protein–RNA interactions for Protein: Q12766

HMGXB3, HMG domain-containing protein 3, humanhuman

Predictions only

Length 1,538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3Q12766 KRT18P11-201ENST00000435214 1283 ntBASIC39.97■■■■□ 3.99
HMGXB3Q12766 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC39.97■■■■□ 3.99
HMGXB3Q12766 TSPY20P-201ENST00000450910 630 ntBASIC39.97■■■■□ 3.99
HMGXB3Q12766 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC39.97■■■■□ 3.99
HMGXB3Q12766 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC39.97■■■■□ 3.99
HMGXB3Q12766 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC39.97■■■■□ 3.99
HMGXB3Q12766 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC39.96■■■■□ 3.99
HMGXB3Q12766 SLC7A5P2-201ENST00000553010 536 ntBASIC39.96■■■■□ 3.99
HMGXB3Q12766 MFSD11-216ENST00000590393 1141 ntBASIC39.96■■■■□ 3.99
HMGXB3Q12766 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC39.96■■■■□ 3.99
HMGXB3Q12766 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC39.96■■■■□ 3.99
HMGXB3Q12766 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC39.96■■■■□ 3.99
HMGXB3Q12766 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC39.96■■■■□ 3.99
HMGXB3Q12766 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC39.96■■■■□ 3.99
HMGXB3Q12766 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC39.96■■■■□ 3.99
HMGXB3Q12766 KRT18P6-201ENST00000555540 1265 ntBASIC39.96■■■■□ 3.99
HMGXB3Q12766 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC39.95■■■■□ 3.99
HMGXB3Q12766 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC39.95■■■■□ 3.99
HMGXB3Q12766 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC39.95■■■■□ 3.99
HMGXB3Q12766 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC39.95■■■■□ 3.99
HMGXB3Q12766 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC39.94■■■■□ 3.98
HMGXB3Q12766 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC39.94■■■■□ 3.98
HMGXB3Q12766 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC39.93■■■■□ 3.98
HMGXB3Q12766 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC39.93■■■■□ 3.98
HMGXB3Q12766 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC39.93■■■■□ 3.98
HMGXB3Q12766 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC39.93■■■■□ 3.98
HMGXB3Q12766 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC39.93■■■■□ 3.98
HMGXB3Q12766 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC39.93■■■■□ 3.98
HMGXB3Q12766 AC011767.1-201ENST00000617410 1153 ntBASIC39.93■■■■□ 3.98
HMGXB3Q12766 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC39.93■■■■□ 3.98
HMGXB3Q12766 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC39.93■■■■□ 3.98
HMGXB3Q12766 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC39.92■■■■□ 3.98
HMGXB3Q12766 MIR4651-201ENST00000582622 73 ntBASIC39.92■■■■□ 3.98
HMGXB3Q12766 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC39.92■■■■□ 3.98
HMGXB3Q12766 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC39.92■■■■□ 3.98
HMGXB3Q12766 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC39.92■■■■□ 3.98
HMGXB3Q12766 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC39.91■■■■□ 3.98
HMGXB3Q12766 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC39.91■■■■□ 3.98
HMGXB3Q12766 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC39.91■■■■□ 3.98
HMGXB3Q12766 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC39.91■■■■□ 3.98
HMGXB3Q12766 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC39.91■■■■□ 3.98
HMGXB3Q12766 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC39.91■■■■□ 3.98
HMGXB3Q12766 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC39.9■■■■□ 3.98
HMGXB3Q12766 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC39.9■■■■□ 3.98
HMGXB3Q12766 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC39.9■■■■□ 3.98
HMGXB3Q12766 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC39.9■■■■□ 3.98
HMGXB3Q12766 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC39.9■■■■□ 3.98
HMGXB3Q12766 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC39.89■■■■□ 3.98
HMGXB3Q12766 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC39.89■■■■□ 3.98
HMGXB3Q12766 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC39.89■■■■□ 3.98
HMGXB3Q12766 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC39.89■■■■□ 3.98
HMGXB3Q12766 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC39.89■■■■□ 3.98
HMGXB3Q12766 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC39.89■■■■□ 3.98
HMGXB3Q12766 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC39.89■■■■□ 3.98
HMGXB3Q12766 STX4-202ENST00000394998 1498 ntTSL 2 BASIC39.89■■■■□ 3.98
HMGXB3Q12766 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC39.89■■■■□ 3.98
HMGXB3Q12766 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC39.88■■■■□ 3.98
HMGXB3Q12766 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC39.88■■■■□ 3.97
HMGXB3Q12766 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC39.87■■■■□ 3.97
HMGXB3Q12766 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC39.87■■■■□ 3.97
HMGXB3Q12766 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC39.87■■■■□ 3.97
HMGXB3Q12766 FP325331.1-202ENST00000623531 1380 ntBASIC39.87■■■■□ 3.97
HMGXB3Q12766 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC39.87■■■■□ 3.97
HMGXB3Q12766 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC39.86■■■■□ 3.97
HMGXB3Q12766 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC39.86■■■■□ 3.97
HMGXB3Q12766 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC39.86■■■■□ 3.97
HMGXB3Q12766 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC39.86■■■■□ 3.97
HMGXB3Q12766 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC39.86■■■■□ 3.97
HMGXB3Q12766 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC39.86■■■■□ 3.97
HMGXB3Q12766 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC39.86■■■■□ 3.97
HMGXB3Q12766 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC39.86■■■■□ 3.97
HMGXB3Q12766 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC39.86■■■■□ 3.97
HMGXB3Q12766 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC39.86■■■■□ 3.97
HMGXB3Q12766 TSPY6P-201ENST00000448518 926 ntBASIC39.86■■■■□ 3.97
HMGXB3Q12766 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC39.86■■■■□ 3.97
HMGXB3Q12766 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC39.85■■■■□ 3.97
HMGXB3Q12766 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC39.85■■■■□ 3.97
HMGXB3Q12766 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC39.85■■■■□ 3.97
HMGXB3Q12766 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC39.85■■■■□ 3.97
HMGXB3Q12766 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC39.85■■■■□ 3.97
HMGXB3Q12766 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC39.85■■■■□ 3.97
HMGXB3Q12766 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC39.85■■■■□ 3.97
HMGXB3Q12766 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC39.85■■■■□ 3.97
HMGXB3Q12766 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC39.85■■■■□ 3.97
HMGXB3Q12766 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC39.84■■■■□ 3.97
HMGXB3Q12766 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC39.84■■■■□ 3.97
HMGXB3Q12766 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC39.84■■■■□ 3.97
HMGXB3Q12766 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC39.84■■■■□ 3.97
HMGXB3Q12766 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC39.84■■■■□ 3.97
HMGXB3Q12766 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC39.84■■■■□ 3.97
HMGXB3Q12766 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC39.84■■■■□ 3.97
HMGXB3Q12766 HLA-L-211ENST00000482052 1765 ntBASIC39.83■■■■□ 3.97
HMGXB3Q12766 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC39.83■■■■□ 3.97
HMGXB3Q12766 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC39.83■■■■□ 3.97
HMGXB3Q12766 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC39.83■■■■□ 3.97
HMGXB3Q12766 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC39.83■■■■□ 3.97
HMGXB3Q12766 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC39.83■■■■□ 3.97
HMGXB3Q12766 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC39.83■■■■□ 3.97
HMGXB3Q12766 MDK-213ENST00000617138 635 ntTSL 2 BASIC39.83■■■■□ 3.97
HMGXB3Q12766 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC39.83■■■■□ 3.97
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms