Protein–RNA interactions for Protein: P47098

TY1B-JR1, Transposon Ty1-JR1 Gag-Pol polyprotein, yeastyeast

Predictions only

Length 1,755 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1B-JR1P47098 RNH203YLR154C 333 nt5.35□□□□□ -1.55
TY1B-JR1P47098 YOR073W-AYOR073W-A 234 nt5.35□□□□□ -1.55
TY1B-JR1P47098 XKS1YGR194C 1803 nt5.35□□□□□ -1.55
TY1B-JR1P47098 IML2YJL082W 2196 nt5.35□□□□□ -1.55
TY1B-JR1P47098 VBA1YMR088C 1689 nt5.35□□□□□ -1.55
TY1B-JR1P47098 PRP19YLL036C 1512 nt5.34□□□□□ -1.55
TY1B-JR1P47098 TAF8YML114C 1533 nt5.34□□□□□ -1.55
TY1B-JR1P47098 USB1YLR132C 873 nt5.34□□□□□ -1.55
TY1B-JR1P47098 PAN1YIR006C 4443 nt5.34□□□□□ -1.55
TY1B-JR1P47098 ZRC1YMR243C 1329 nt5.34□□□□□ -1.55
TY1B-JR1P47098 APE2YKL157W 2859 nt5.34□□□□□ -1.55
TY1B-JR1P47098 NGL2YMR285C 1548 nt5.34□□□□□ -1.55
TY1B-JR1P47098 FAS2YPL231W 5664 nt5.34□□□□□ -1.55
TY1B-JR1P47098 DAM1YGR113W 1032 nt5.34□□□□□ -1.56
TY1B-JR1P47098 MCX1YBR227C 1563 nt5.33□□□□□ -1.56
TY1B-JR1P47098 EXO1YOR033C 2109 nt5.33□□□□□ -1.56
TY1B-JR1P47098 MBB1YJL199C 327 nt5.33□□□□□ -1.56
TY1B-JR1P47098 DER1YBR201W 636 nt5.33□□□□□ -1.56
TY1B-JR1P47098 VMS1YDR049W 1899 nt5.33□□□□□ -1.56
TY1B-JR1P47098 YHR212W-AYHR212W-A 204 nt5.32□□□□□ -1.56
TY1B-JR1P47098 VTA1YLR181C 993 nt5.32□□□□□ -1.56
TY1B-JR1P47098 YAR061WYAR061W 204 nt5.32□□□□□ -1.56
TY1B-JR1P47098 ATG8YBL078C 354 nt5.32□□□□□ -1.56
TY1B-JR1P47098 PSF3YOL146W 585 nt5.32□□□□□ -1.56
TY1B-JR1P47098 MSR1YHR091C 1932 nt5.32□□□□□ -1.56
TY1B-JR1P47098 SEG2YKL105C 3399 nt5.32□□□□□ -1.56
TY1B-JR1P47098 RIM9YMR063W 720 nt5.32□□□□□ -1.56
TY1B-JR1P47098 THI7YLR237W 1797 nt5.31□□□□□ -1.56
TY1B-JR1P47098 YFR052C-AYFR052C-A 306 nt5.31□□□□□ -1.56
TY1B-JR1P47098 MNN11YJL183W 1269 nt5.31□□□□□ -1.56
TY1B-JR1P47098 YDR444WYDR444W 2064 nt5.31□□□□□ -1.56
TY1B-JR1P47098 BNA5YLR231C 1362 nt5.3□□□□□ -1.56
TY1B-JR1P47098 BMH1YER177W 804 nt5.3□□□□□ -1.56
TY1B-JR1P47098 COX23YHR116W 456 nt5.3□□□□□ -1.56
TY1B-JR1P47098 PPX1YHR201C 1194 nt5.3□□□□□ -1.56
TY1B-JR1P47098 SRB6YBR253W 366 nt5.3□□□□□ -1.56
TY1B-JR1P47098 TRM1YDR120C 1713 nt5.3□□□□□ -1.56
TY1B-JR1P47098 EMP70YLR083C 2004 nt5.3□□□□□ -1.56
TY1B-JR1P47098 YDR306CYDR306C 1437 nt5.3□□□□□ -1.56
TY1B-JR1P47098 RIM11YMR139W 1113 nt5.29□□□□□ -1.56
TY1B-JR1P47098 YGR051CYGR051C 324 nt5.29□□□□□ -1.56
TY1B-JR1P47098 BOI2YER114C 3123 nt5.28□□□□□ -1.56
TY1B-JR1P47098 YBL059WYBL059W 582 nt5.28□□□□□ -1.56
TY1B-JR1P47098 PRE9YGR135W 777 nt5.27□□□□□ -1.57
TY1B-JR1P47098 APC9YLR102C 798 nt5.27□□□□□ -1.57
TY1B-JR1P47098 SHE1YBL031W 1017 nt5.27□□□□□ -1.57
TY1B-JR1P47098 snR32snR32 188 nt5.27□□□□□ -1.57
TY1B-JR1P47098 TOS3YGL179C 1683 nt5.27□□□□□ -1.57
TY1B-JR1P47098 PAM1YDR251W 2493 nt5.26□□□□□ -1.57
TY1B-JR1P47098 FSH3YOR280C 801 nt5.26□□□□□ -1.57
TY1B-JR1P47098 HSP82YPL240C 2130 nt5.26□□□□□ -1.57
TY1B-JR1P47098 HOM3YER052C 1584 nt5.26□□□□□ -1.57
TY1B-JR1P47098 DRS2YAL026C 4068 nt5.25□□□□□ -1.57
TY1B-JR1P47098 RTT109YLL002W 1311 nt5.25□□□□□ -1.57
TY1B-JR1P47098 CKA2YOR061W 1020 nt5.25□□□□□ -1.57
TY1B-JR1P47098 YBR137WYBR137W 540 nt5.25□□□□□ -1.57
TY1B-JR1P47098 PEX7YDR142C 1128 nt5.24□□□□□ -1.57
TY1B-JR1P47098 YPL114WYPL114W 420 nt5.24□□□□□ -1.57
TY1B-JR1P47098 CHD1YER164W 4407 nt5.23□□□□□ -1.57
TY1B-JR1P47098 MET10YFR030W 3108 nt5.23□□□□□ -1.57
TY1B-JR1P47098 EKI1YDR147W 1605 nt5.23□□□□□ -1.57
TY1B-JR1P47098 YJR128WYJR128W 360 nt5.23□□□□□ -1.57
TY1B-JR1P47098 RIM15YFL033C 5313 nt5.23□□□□□ -1.57
TY1B-JR1P47098 AVT1YJR001W 1809 nt5.22□□□□□ -1.57
TY1B-JR1P47098 MRH1YDR033W 963 nt5.22□□□□□ -1.57
TY1B-JR1P47098 tF(GAA)DtF(GAA)D 73 nt5.22□□□□□ -1.57
TY1B-JR1P47098 tF(GAA)NtF(GAA)N 73 nt5.22□□□□□ -1.57
TY1B-JR1P47098 RPL8AYHL033C 771 nt5.22□□□□□ -1.57
TY1B-JR1P47098 YTA6YPL074W 2265 nt5.22□□□□□ -1.57
TY1B-JR1P47098 YML020WYML020W 1995 nt5.22□□□□□ -1.57
TY1B-JR1P47098 COA4YLR218C 453 nt5.21□□□□□ -1.57
TY1B-JR1P47098 NOP7YGR103W 1818 nt5.21□□□□□ -1.57
TY1B-JR1P47098 COS8YHL048W 1146 nt5.21□□□□□ -1.58
TY1B-JR1P47098 NIP7YPL211W 546 nt5.21□□□□□ -1.58
TY1B-JR1P47098 STP22YCL008C 1158 nt5.21□□□□□ -1.58
TY1B-JR1P47098 ECM16YMR128W 3804 nt5.21□□□□□ -1.58
TY1B-JR1P47098 SAS10YDL153C 1833 nt5.2□□□□□ -1.58
TY1B-JR1P47098 EXO5YBR163W 1758 nt5.2□□□□□ -1.58
TY1B-JR1P47098 YER034WYER034W 558 nt5.2□□□□□ -1.58
TY1B-JR1P47098 TEM1YML064C 738 nt5.2□□□□□ -1.58
TY1B-JR1P47098 MCK1YNL307C 1128 nt5.2□□□□□ -1.58
TY1B-JR1P47098 ARG5,6YER069W 2592 nt5.2□□□□□ -1.58
TY1B-JR1P47098 IME4YGL192W 1803 nt5.19□□□□□ -1.58
TY1B-JR1P47098 TED1YIL039W 1422 nt5.19□□□□□ -1.58
TY1B-JR1P47098 HOM2YDR158W 1098 nt5.19□□□□□ -1.58
TY1B-JR1P47098 YJL175WYJL175W 513 nt5.19□□□□□ -1.58
TY1B-JR1P47098 MAK16YAL025C 921 nt5.19□□□□□ -1.58
TY1B-JR1P47098 MRPL16YBL038W 699 nt5.19□□□□□ -1.58
TY1B-JR1P47098 YFL052WYFL052W 1398 nt5.18□□□□□ -1.58
TY1B-JR1P47098 OMS1YDR316W 1416 nt5.18□□□□□ -1.58
TY1B-JR1P47098 RAI1YGL246C 1164 nt5.18□□□□□ -1.58
TY1B-JR1P47098 MIS1YBR084W 2928 nt5.18□□□□□ -1.58
TY1B-JR1P47098 LEU1YGL009C 2340 nt5.17□□□□□ -1.58
TY1B-JR1P47098 RPS9BYBR189W 588 nt5.17□□□□□ -1.58
TY1B-JR1P47098 INO80YGL150C 4470 nt5.17□□□□□ -1.58
TY1B-JR1P47098 UPS3YDR185C 540 nt5.16□□□□□ -1.58
TY1B-JR1P47098 COX14YML129C 213 nt5.16□□□□□ -1.58
TY1B-JR1P47098 UBA2YDR390C 1911 nt5.15□□□□□ -1.58
TY1B-JR1P47098 HSP42YDR171W 1128 nt5.15□□□□□ -1.58
TY1B-JR1P47098 SUE1YPR151C 621 nt5.15□□□□□ -1.58
Retrieved 100 of 7,029 protein–RNA pairs in 10.1 ms