Protein–RNA interactions for Protein: P40084

RTR1, RNA polymerase II subunit B1 CTD phosphatase RTR1, yeastyeast

Predicted RBP Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RTR1P40084 PRP19YLL036C 1512 nt4.74□□□□□ -1.65
RTR1P40084 YBR139WYBR139W 1527 nt4.74□□□□□ -1.65
RTR1P40084 RAD16YBR114W 2373 nt4.74□□□□□ -1.65
RTR1P40084 HST4YDR191W 1113 nt4.74□□□□□ -1.65
RTR1P40084 YDR271CYDR271C 372 nt4.74□□□□□ -1.65
RTR1P40084 YDR445CYDR445C 408 nt4.74□□□□□ -1.65
RTR1P40084 BIO2YGR286C 1128 nt4.74□□□□□ -1.65
RTR1P40084 RPB3YIL021W 957 nt4.74□□□□□ -1.65
RTR1P40084 SKG6YHR149C 2205 nt4.74□□□□□ -1.65
RTR1P40084 GAC1YOR178C 2382 nt4.73□□□□□ -1.65
RTR1P40084 FKH2YNL068C 2589 nt4.73□□□□□ -1.65
RTR1P40084 VMA1YDL185W 3216 nt4.73□□□□□ -1.65
RTR1P40084 PRM7YDL039C 2097 nt4.73□□□□□ -1.65
RTR1P40084 HMLALPHA1YCL066W 528 nt4.73□□□□□ -1.65
RTR1P40084 MATALPHA1YCR040W 528 nt4.73□□□□□ -1.65
RTR1P40084 OTU1YFL044C 906 nt4.73□□□□□ -1.65
RTR1P40084 ROT1YMR200W 771 nt4.73□□□□□ -1.65
RTR1P40084 TCB3YML072C 4638 nt4.72□□□□□ -1.65
RTR1P40084 YER076CYER076C 909 nt4.72□□□□□ -1.65
RTR1P40084 YIL028WYIL028W 399 nt4.72□□□□□ -1.65
RTR1P40084 YKR104WYKR104W 921 nt4.72□□□□□ -1.65
RTR1P40084 MAC1YMR021C 1254 nt4.72□□□□□ -1.65
RTR1P40084 PHO87YCR037C 2772 nt4.71□□□□□ -1.65
RTR1P40084 PRP43YGL120C 2304 nt4.71□□□□□ -1.66
RTR1P40084 YHR177WYHR177W 1362 nt4.71□□□□□ -1.66
RTR1P40084 GCV1YDR019C 1203 nt4.71□□□□□ -1.66
RTR1P40084 YER133W-AYER133W-A 342 nt4.71□□□□□ -1.66
RTR1P40084 RKM2YDR198C 1440 nt4.71□□□□□ -1.66
RTR1P40084 ESF1YDR365C 1887 nt4.71□□□□□ -1.66
RTR1P40084 PDR12YPL058C 4536 nt4.7□□□□□ -1.66
RTR1P40084 GPR1YDL035C 2886 nt4.7□□□□□ -1.66
RTR1P40084 ACT1YFL039C 1128 nt4.7□□□□□ -1.66
RTR1P40084 SGN1YIR001C 753 nt4.7□□□□□ -1.66
RTR1P40084 COX19YLL018C-A 297 nt4.7□□□□□ -1.66
RTR1P40084 TOM40YMR203W 1164 nt4.7□□□□□ -1.66
RTR1P40084 MED4YOR174W 855 nt4.7□□□□□ -1.66
RTR1P40084 NAT5YOR253W 531 nt4.7□□□□□ -1.66
RTR1P40084 OSW1YOR255W 837 nt4.7□□□□□ -1.66
RTR1P40084 POF1YCL047C 777 nt4.7□□□□□ -1.66
RTR1P40084 ARX1YDR101C 1782 nt4.7□□□□□ -1.66
RTR1P40084 IFM1YOL023W 2031 nt4.7□□□□□ -1.66
RTR1P40084 MRE11YMR224C 2079 nt4.69□□□□□ -1.66
RTR1P40084 YGL108CYGL108C 423 nt4.69□□□□□ -1.66
RTR1P40084 YGR051CYGR051C 324 nt4.69□□□□□ -1.66
RTR1P40084 YKL169CYKL169C 384 nt4.69□□□□□ -1.66
RTR1P40084 HMX1YLR205C 954 nt4.69□□□□□ -1.66
RTR1P40084 TDA5YLR426W 981 nt4.69□□□□□ -1.66
RTR1P40084 GLC3YEL011W 2115 nt4.69□□□□□ -1.66
RTR1P40084 SEN1YLR430W 6696 nt4.68□□□□□ -1.66
RTR1P40084 CDC45YLR103C 1953 nt4.68□□□□□ -1.66
RTR1P40084 YDL071CYDL071C 375 nt4.68□□□□□ -1.66
RTR1P40084 YPL077CYPL077C 723 nt4.68□□□□□ -1.66
RTR1P40084 YBR126W-AYBR126W-A 207 nt4.68□□□□□ -1.66
RTR1P40084 SFI1YLL003W 2841 nt4.68□□□□□ -1.66
RTR1P40084 HUL4YJR036C 2679 nt4.67□□□□□ -1.66
RTR1P40084 MRPL7YDR237W 879 nt4.67□□□□□ -1.66
RTR1P40084 COX4YGL187C 468 nt4.67□□□□□ -1.66
RTR1P40084 GTR1YML121W 933 nt4.67□□□□□ -1.66
RTR1P40084 TOM7YNL070W 183 nt4.67□□□□□ -1.66
RTR1P40084 PFA4YOL003C 1137 nt4.67□□□□□ -1.66
RTR1P40084 YOL019W-AYOL019W-A 153 nt4.67□□□□□ -1.66
RTR1P40084 UTP23YOR004W 765 nt4.67□□□□□ -1.66
RTR1P40084 OPY2YPR075C 1083 nt4.67□□□□□ -1.66
RTR1P40084 MLH2YLR035C 2088 nt4.67□□□□□ -1.66
RTR1P40084 ECM16YMR128W 3804 nt4.67□□□□□ -1.66
RTR1P40084 PIM1YBL022C 3402 nt4.66□□□□□ -1.66
RTR1P40084 RDS1YCR106W 2499 nt4.66□□□□□ -1.66
RTR1P40084 EKI1YDR147W 1605 nt4.66□□□□□ -1.66
RTR1P40084 HOM2YDR158W 1098 nt4.66□□□□□ -1.66
RTR1P40084 YDR282CYDR282C 1245 nt4.66□□□□□ -1.66
RTR1P40084 YLR049CYLR049C 1287 nt4.66□□□□□ -1.66
RTR1P40084 GLO4YOR040W 858 nt4.66□□□□□ -1.66
RTR1P40084 YOR292CYOR292C 930 nt4.66□□□□□ -1.66
RTR1P40084 RTT103YDR289C 1230 nt4.65□□□□□ -1.67
RTR1P40084 CDC8YJR057W 651 nt4.65□□□□□ -1.67
RTR1P40084 PZF1YPR186C 1290 nt4.65□□□□□ -1.67
RTR1P40084 YBR219CYBR219C 384 nt4.65□□□□□ -1.67
RTR1P40084 IML2YJL082W 2196 nt4.65□□□□□ -1.67
RTR1P40084 PRP9YDL030W 1593 nt4.65□□□□□ -1.67
RTR1P40084 SLD2YKL108W 1362 nt4.65□□□□□ -1.67
RTR1P40084 STB2YMR053C 2553 nt4.64□□□□□ -1.67
RTR1P40084 TGL4YKR089C 2733 nt4.64□□□□□ -1.67
RTR1P40084 KIN28YDL108W 921 nt4.64□□□□□ -1.67
RTR1P40084 PAU17YLL025W 375 nt4.64□□□□□ -1.67
RTR1P40084 NNK1YKL171W 2787 nt4.64□□□□□ -1.67
RTR1P40084 VHS3YOR054C 2025 nt4.63□□□□□ -1.67
RTR1P40084 RPS14AYCR031C 414 nt4.63□□□□□ -1.67
RTR1P40084 HIS6YIL020C 786 nt4.63□□□□□ -1.67
RTR1P40084 HFA1YMR207C 6372 nt4.63□□□□□ -1.67
RTR1P40084 MSE1YOL033W 1611 nt4.63□□□□□ -1.67
RTR1P40084 TRE1YPL176C 2352 nt4.63□□□□□ -1.67
RTR1P40084 PRP28YDR243C 1767 nt4.63□□□□□ -1.67
RTR1P40084 TPO2YGR138C 1845 nt4.62□□□□□ -1.67
RTR1P40084 VID28YIL017C 2766 nt4.62□□□□□ -1.67
RTR1P40084 DIP2YLR129W 2832 nt4.62□□□□□ -1.67
RTR1P40084 YGR269WYGR269W 327 nt4.62□□□□□ -1.67
RTR1P40084 YJR112W-AYJR112W-A 330 nt4.62□□□□□ -1.67
RTR1P40084 YLR125WYLR125W 411 nt4.62□□□□□ -1.67
RTR1P40084 TIF34YMR146C 1044 nt4.62□□□□□ -1.67
RTR1P40084 IMP1YMR150C 573 nt4.62□□□□□ -1.67
Retrieved 100 of 7,029 protein–RNA pairs in 25.3 ms