Protein–RNA interactions for Protein: P38811

TRA1, Transcription-associated protein 1, yeastyeast

Predictions only

Length 3,744 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TRA1P38811 COX11YPL132W 903 nt3.03□□□□□ -1.92
TRA1P38811 SKG6YHR149C 2205 nt3.03□□□□□ -1.92
TRA1P38811 CDC15YAR019C 2925 nt3.03□□□□□ -1.92
TRA1P38811 SED5YLR026C 1023 nt3.03□□□□□ -1.92
TRA1P38811 ELF1YKL160W 438 nt3.03□□□□□ -1.93
TRA1P38811 ADD37YMR184W 597 nt3.03□□□□□ -1.93
TRA1P38811 CLD1YGR110W 1338 nt3.02□□□□□ -1.93
TRA1P38811 RNA15YGL044C 891 nt3.02□□□□□ -1.93
TRA1P38811 GET1YGL020C 708 nt3.02□□□□□ -1.93
TRA1P38811 YOR331CYOR331C 558 nt3.02□□□□□ -1.93
TRA1P38811 SRB6YBR253W 366 nt3.02□□□□□ -1.93
TRA1P38811 YCL021W-AYCL021W-A 378 nt3.02□□□□□ -1.93
TRA1P38811 BSP1YPR171W 1731 nt3.02□□□□□ -1.93
TRA1P38811 SHO1YER118C 1104 nt3.02□□□□□ -1.93
TRA1P38811 TGS1YPL157W 948 nt3.02□□□□□ -1.93
TRA1P38811 URA7YBL039C 1740 nt3.01□□□□□ -1.93
TRA1P38811 SAS10YDL153C 1833 nt3.01□□□□□ -1.93
TRA1P38811 YOR283WYOR283W 693 nt3.01□□□□□ -1.93
TRA1P38811 OLE1YGL055W 1533 nt3.01□□□□□ -1.93
TRA1P38811 DNF2YDR093W 4839 nt3.01□□□□□ -1.93
TRA1P38811 SIS2YKR072C 1689 nt3.01□□□□□ -1.93
TRA1P38811 POL31YJR006W 1464 nt3.01□□□□□ -1.93
TRA1P38811 YHR212W-AYHR212W-A 204 nt3.01□□□□□ -1.93
TRA1P38811 TMA19YKL056C 504 nt3.01□□□□□ -1.93
TRA1P38811 YAR061WYAR061W 204 nt3.01□□□□□ -1.93
TRA1P38811 TEM1YML064C 738 nt3□□□□□ -1.93
TRA1P38811 RPA43YOR340C 981 nt3□□□□□ -1.93
TRA1P38811 BLM10YFL007W 6432 nt3□□□□□ -1.93
TRA1P38811 YBR225WYBR225W 2703 nt3□□□□□ -1.93
TRA1P38811 ACE2YLR131C 2313 nt3□□□□□ -1.93
TRA1P38811 SMC3YJL074C 3693 nt3□□□□□ -1.93
TRA1P38811 CDC26YFR036W 375 nt3□□□□□ -1.93
TRA1P38811 ARN2YHL047C 1863 nt3□□□□□ -1.93
TRA1P38811 SIR4YDR227W 4077 nt3□□□□□ -1.93
TRA1P38811 GPI14YJR013W 1212 nt2.99□□□□□ -1.93
TRA1P38811 ATG8YBL078C 354 nt2.99□□□□□ -1.93
TRA1P38811 RAD54YGL163C 2697 nt2.99□□□□□ -1.93
TRA1P38811 ERG5YMR015C 1617 nt2.99□□□□□ -1.93
TRA1P38811 DIP2YLR129W 2832 nt2.99□□□□□ -1.93
TRA1P38811 AIM25YJR100C 984 nt2.99□□□□□ -1.93
TRA1P38811 PWR1PWR1 941 nt2.99□□□□□ -1.93
TRA1P38811 YJR020WYJR020W 333 nt2.98□□□□□ -1.93
TRA1P38811 RPL8BYLL045C 771 nt2.98□□□□□ -1.93
TRA1P38811 HOM3YER052C 1584 nt2.98□□□□□ -1.93
TRA1P38811 VHS3YOR054C 2025 nt2.98□□□□□ -1.93
TRA1P38811 YTA6YPL074W 2265 nt2.98□□□□□ -1.93
TRA1P38811 EFM2YBR271W 1260 nt2.98□□□□□ -1.93
TRA1P38811 VTC4YJL012C 2166 nt2.98□□□□□ -1.93
TRA1P38811 MNN11YJL183W 1269 nt2.97□□□□□ -1.93
TRA1P38811 YTM1YOR272W 1383 nt2.97□□□□□ -1.93
TRA1P38811 YGL140CYGL140C 3660 nt2.97□□□□□ -1.93
TRA1P38811 GTF1YGR102C 552 nt2.97□□□□□ -1.93
TRA1P38811 VHC1YBR235W 3363 nt2.97□□□□□ -1.93
TRA1P38811 EPL1YFL024C 2499 nt2.97□□□□□ -1.93
TRA1P38811 CFD1YIL003W 882 nt2.97□□□□□ -1.93
TRA1P38811 CPR6YLR216C 1116 nt2.97□□□□□ -1.93
TRA1P38811 MSC7YHR039C 1935 nt2.97□□□□□ -1.93
TRA1P38811 MSD1YPL104W 1977 nt2.96□□□□□ -1.94
TRA1P38811 BUD14YAR014C 2130 nt2.96□□□□□ -1.94
TRA1P38811 YER034WYER034W 558 nt2.96□□□□□ -1.94
TRA1P38811 DOG1YHR044C 741 nt2.96□□□□□ -1.94
TRA1P38811 SVF1YDR346C 1446 nt2.96□□□□□ -1.94
TRA1P38811 IFM1YOL023W 2031 nt2.96□□□□□ -1.94
TRA1P38811 UGA3YDL170W 1587 nt2.96□□□□□ -1.94
TRA1P38811 ECM32YER176W 3366 nt2.96□□□□□ -1.94
TRA1P38811 MEK1YOR351C 1494 nt2.96□□□□□ -1.94
TRA1P38811 HMF1YER057C 390 nt2.95□□□□□ -1.94
TRA1P38811 RSC1YGR056W 2787 nt2.95□□□□□ -1.94
TRA1P38811 APE1YKL103C 1545 nt2.95□□□□□ -1.94
TRA1P38811 YPR003CYPR003C 2265 nt2.95□□□□□ -1.94
TRA1P38811 YOR296WYOR296W 3870 nt2.95□□□□□ -1.94
TRA1P38811 EXO1YOR033C 2109 nt2.95□□□□□ -1.94
TRA1P38811 VPS73YGL104C 1461 nt2.95□□□□□ -1.94
TRA1P38811 UBX5YDR330W 1503 nt2.94□□□□□ -1.94
TRA1P38811 LAC1YKL008C 1257 nt2.94□□□□□ -1.94
TRA1P38811 RUF5-1RUF5-1 710 nt2.94□□□□□ -1.94
TRA1P38811 RUF5-2RUF5-2 710 nt2.94□□□□□ -1.94
TRA1P38811 GAL4YPL248C 2646 nt2.94□□□□□ -1.94
TRA1P38811 RPL36BYPL249C-A 303 nt2.94□□□□□ -1.94
TRA1P38811 VMS1YDR049W 1899 nt2.94□□□□□ -1.94
TRA1P38811 COS8YHL048W 1146 nt2.94□□□□□ -1.94
TRA1P38811 COX23YHR116W 456 nt2.94□□□□□ -1.94
TRA1P38811 COA4YLR218C 453 nt2.94□□□□□ -1.94
TRA1P38811 PPH3YDR075W 927 nt2.93□□□□□ -1.94
TRA1P38811 YDR222WYDR222W 1248 nt2.93□□□□□ -1.94
TRA1P38811 TLG1YDR468C 675 nt2.93□□□□□ -1.94
TRA1P38811 YIL077CYIL077C 963 nt2.93□□□□□ -1.94
TRA1P38811 YBL059WYBL059W 582 nt2.93□□□□□ -1.94
TRA1P38811 SIW14YNL032W 846 nt2.93□□□□□ -1.94
TRA1P38811 NIP7YPL211W 546 nt2.93□□□□□ -1.94
TRA1P38811 SSE2YBR169C 2082 nt2.92□□□□□ -1.94
TRA1P38811 HER2YMR293C 1395 nt2.92□□□□□ -1.94
TRA1P38811 BMH1YER177W 804 nt2.92□□□□□ -1.94
TRA1P38811 FLC3YGL139W 2409 nt2.92□□□□□ -1.94
TRA1P38811 IME4YGL192W 1803 nt2.92□□□□□ -1.94
TRA1P38811 tK(UUU)DtK(UUU)D 73 nt2.92□□□□□ -1.94
TRA1P38811 tK(UUU)G1tK(UUU)G1 73 nt2.92□□□□□ -1.94
TRA1P38811 tK(UUU)G2tK(UUU)G2 73 nt2.92□□□□□ -1.94
TRA1P38811 tK(UUU)KtK(UUU)K 73 nt2.92□□□□□ -1.94
TRA1P38811 tK(UUU)LtK(UUU)L 73 nt2.92□□□□□ -1.94
Retrieved 100 of 7,029 protein–RNA pairs in 21.6 ms