Protein–RNA interactions for Protein: P25846

MSH1, DNA mismatch repair protein MSH1, mitochondrial, yeastyeast

Predictions only

Length 959 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSH1P25846 AAH1YNL141W 1044 nt5□□□□□ -1.61
MSH1P25846 TEX1YNL253W 1269 nt5□□□□□ -1.61
MSH1P25846 GRE1YPL223C 507 nt5□□□□□ -1.61
MSH1P25846 ALG2YGL065C 1512 nt5□□□□□ -1.61
MSH1P25846 TDA11YHR159W 1515 nt5□□□□□ -1.61
MSH1P25846 SOF1YLL011W 1470 nt5□□□□□ -1.61
MSH1P25846 LEU1YGL009C 2340 nt5□□□□□ -1.61
MSH1P25846 FRE1YLR214W 2061 nt5□□□□□ -1.61
MSH1P25846 GPB1YOR371C 2694 nt5□□□□□ -1.61
MSH1P25846 YGR266WYGR266W 2106 nt4.99□□□□□ -1.61
MSH1P25846 SUR2YDR297W 1050 nt4.99□□□□□ -1.61
MSH1P25846 YER138W-AYER138W-A 105 nt4.99□□□□□ -1.61
MSH1P25846 DDI2YFL061W 678 nt4.99□□□□□ -1.61
MSH1P25846 NSG1YHR133C 876 nt4.99□□□□□ -1.61
MSH1P25846 EBP2YKL172W 1284 nt4.99□□□□□ -1.61
MSH1P25846 YKL177WYKL177W 339 nt4.99□□□□□ -1.61
MSH1P25846 BUD28YLR062C 378 nt4.99□□□□□ -1.61
MSH1P25846 DDI3YNL335W 678 nt4.99□□□□□ -1.61
MSH1P25846 YBL107W-AYBL107W-A 105 nt4.99□□□□□ -1.61
MSH1P25846 CKB2YOR039W 777 nt4.99□□□□□ -1.61
MSH1P25846 IAH1YOR126C 717 nt4.99□□□□□ -1.61
MSH1P25846 CNS1YBR155W 1158 nt4.99□□□□□ -1.61
MSH1P25846 YDR261C-DYDR261C-D 4815 nt4.99□□□□□ -1.61
MSH1P25846 SSA2YLL024C 1920 nt4.99□□□□□ -1.61
MSH1P25846 RRI1YDL216C 1323 nt4.98□□□□□ -1.61
MSH1P25846 YER158CYER158C 1722 nt4.98□□□□□ -1.61
MSH1P25846 MET4YNL103W 2019 nt4.98□□□□□ -1.61
MSH1P25846 YCR050CYCR050C 309 nt4.98□□□□□ -1.61
MSH1P25846 YDR134CYDR134C 411 nt4.98□□□□□ -1.61
MSH1P25846 CLC1YGR167W 702 nt4.98□□□□□ -1.61
MSH1P25846 PRE7YBL041W 726 nt4.98□□□□□ -1.61
MSH1P25846 SER1YOR184W 1188 nt4.98□□□□□ -1.61
MSH1P25846 HIR2YOR038C 2628 nt4.98□□□□□ -1.61
MSH1P25846 RTK1YDL025C 1863 nt4.98□□□□□ -1.61
MSH1P25846 MEF2YJL102W 2460 nt4.98□□□□□ -1.61
MSH1P25846 RIM21YNL294C 1602 nt4.97□□□□□ -1.61
MSH1P25846 PIM1YBL022C 3402 nt4.97□□□□□ -1.61
MSH1P25846 HRK1YOR267C 2280 nt4.97□□□□□ -1.61
MSH1P25846 ZPR1YGR211W 1461 nt4.97□□□□□ -1.61
MSH1P25846 ACT1YFL039C 1128 nt4.97□□□□□ -1.61
MSH1P25846 ARI1YGL157W 1044 nt4.97□□□□□ -1.61
MSH1P25846 tR(ACG)JtR(ACG)J 73 nt4.97□□□□□ -1.61
MSH1P25846 YHR112CYHR112C 1137 nt4.97□□□□□ -1.61
MSH1P25846 TMA16YOR252W 537 nt4.97□□□□□ -1.61
MSH1P25846 PAN1YIR006C 4443 nt4.97□□□□□ -1.61
MSH1P25846 SUL2YLR092W 2682 nt4.97□□□□□ -1.61
MSH1P25846 RAD28YDR030C 1521 nt4.97□□□□□ -1.61
MSH1P25846 RIT1YMR283C 1542 nt4.97□□□□□ -1.61
MSH1P25846 ENT1YDL161W 1365 nt4.96□□□□□ -1.62
MSH1P25846 RCK2YLR248W 1833 nt4.96□□□□□ -1.62
MSH1P25846 RRP45YDR280W 918 nt4.96□□□□□ -1.62
MSH1P25846 YDR545C-AYDR545C-A 480 nt4.96□□□□□ -1.62
MSH1P25846 YEL077W-AYEL077W-A 483 nt4.96□□□□□ -1.62
MSH1P25846 FAU1YER183C 636 nt4.96□□□□□ -1.62
MSH1P25846 YER190C-BYER190C-B 483 nt4.96□□□□□ -1.62
MSH1P25846 YFL068WYFL068W 483 nt4.96□□□□□ -1.62
MSH1P25846 YGR296C-BYGR296C-B 483 nt4.96□□□□□ -1.62
MSH1P25846 YHL050W-AYHL050W-A 483 nt4.96□□□□□ -1.62
MSH1P25846 YHR219C-AYHR219C-A 483 nt4.96□□□□□ -1.62
MSH1P25846 YIL177W-AYIL177W-A 483 nt4.96□□□□□ -1.62
MSH1P25846 YJL225W-AYJL225W-A 483 nt4.96□□□□□ -1.62
MSH1P25846 ELF1YKL160W 438 nt4.96□□□□□ -1.62
MSH1P25846 YLL066W-AYLL066W-A 483 nt4.96□□□□□ -1.62
MSH1P25846 YLL067W-AYLL067W-A 483 nt4.96□□□□□ -1.62
MSH1P25846 YLR466C-AYLR466C-A 483 nt4.96□□□□□ -1.62
MSH1P25846 YLR467C-AYLR467C-A 483 nt4.96□□□□□ -1.62
MSH1P25846 YML133W-BYML133W-B 483 nt4.96□□□□□ -1.62
MSH1P25846 MTG1YMR097C 1104 nt4.96□□□□□ -1.62
MSH1P25846 YNL339W-BYNL339W-B 483 nt4.96□□□□□ -1.62
MSH1P25846 YOL038C-AYOL038C-A 96 nt4.96□□□□□ -1.62
MSH1P25846 YBL113W-AYBL113W-A 483 nt4.96□□□□□ -1.62
MSH1P25846 YOR396C-AYOR396C-A 483 nt4.96□□□□□ -1.62
MSH1P25846 YPL283W-BYPL283W-B 483 nt4.96□□□□□ -1.62
MSH1P25846 YPR204C-AYPR204C-A 483 nt4.96□□□□□ -1.62
MSH1P25846 YOL153CYOL153C 1746 nt4.96□□□□□ -1.62
MSH1P25846 HIS4YCL030C 2400 nt4.96□□□□□ -1.62
MSH1P25846 IOC4YMR044W 1428 nt4.96□□□□□ -1.62
MSH1P25846 HOYDL227C 1761 nt4.96□□□□□ -1.62
MSH1P25846 IMA3YIL172C 1770 nt4.96□□□□□ -1.62
MSH1P25846 IMA4YJL221C 1770 nt4.96□□□□□ -1.62
MSH1P25846 FAA3YIL009W 2085 nt4.95□□□□□ -1.62
MSH1P25846 TUB2YFL037W 1374 nt4.95□□□□□ -1.62
MSH1P25846 KEG1YFR042W 603 nt4.95□□□□□ -1.62
MSH1P25846 YGR149WYGR149W 1299 nt4.95□□□□□ -1.62
MSH1P25846 HIS6YIL020C 786 nt4.95□□□□□ -1.62
MSH1P25846 tX(XXX)DtX(XXX)D 100 nt4.95□□□□□ -1.62
MSH1P25846 BUD17YNR027W 954 nt4.95□□□□□ -1.62
MSH1P25846 TFB6YOR352W 1032 nt4.95□□□□□ -1.62
MSH1P25846 AME1YBR211C 975 nt4.95□□□□□ -1.62
MSH1P25846 TRE1YPL176C 2352 nt4.95□□□□□ -1.62
MSH1P25846 PMT4YJR143C 2289 nt4.95□□□□□ -1.62
MSH1P25846 HUL4YJR036C 2679 nt4.95□□□□□ -1.62
MSH1P25846 SSB2YNL209W 1842 nt4.95□□□□□ -1.62
MSH1P25846 CMK1YFR014C 1341 nt4.95□□□□□ -1.62
MSH1P25846 STP4YDL048C 1473 nt4.94□□□□□ -1.62
MSH1P25846 TIF4632YGL049C 2745 nt4.94□□□□□ -1.62
MSH1P25846 HNT2YDR305C 654 nt4.94□□□□□ -1.62
MSH1P25846 RIP1YEL024W 648 nt4.94□□□□□ -1.62
MSH1P25846 ARC1YGL105W 1131 nt4.94□□□□□ -1.62
MSH1P25846 CYC1YJR048W 330 nt4.94□□□□□ -1.62
Retrieved 100 of 7,029 protein–RNA pairs in 22.7 ms