Protein–RNA interactions for Protein: P15884

TCF4, Transcription factor 4, humanhuman

Predictions only

Length 667 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4P15884 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC23.23■■□□□ 1.31
TCF4P15884 TRIR-205ENST00000592273 783 ntTSL 3 BASIC23.23■■□□□ 1.31
TCF4P15884 MIR6724-1-201ENST00000616420 92 ntBASIC23.23■■□□□ 1.31
TCF4P15884 MIR6724-2-201ENST00000616483 92 ntBASIC23.23■■□□□ 1.31
TCF4P15884 MIR6724-4-201ENST00000617390 92 ntBASIC23.23■■□□□ 1.31
TCF4P15884 MIR6724-3-201ENST00000622482 92 ntBASIC23.23■■□□□ 1.31
TCF4P15884 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
TCF4P15884 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC23.23■■□□□ 1.31
TCF4P15884 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC23.23■■□□□ 1.31
TCF4P15884 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC23.23■■□□□ 1.31
TCF4P15884 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
TCF4P15884 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC23.23■■□□□ 1.31
TCF4P15884 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
TCF4P15884 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
TCF4P15884 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC23.22■■□□□ 1.31
TCF4P15884 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC23.22■■□□□ 1.31
TCF4P15884 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
TCF4P15884 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
TCF4P15884 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC23.22■■□□□ 1.31
TCF4P15884 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
TCF4P15884 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
TCF4P15884 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC23.21■■□□□ 1.31
TCF4P15884 C17orf82-201ENST00000623772 1530 ntBASIC23.21■■□□□ 1.31
TCF4P15884 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
TCF4P15884 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
TCF4P15884 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
TCF4P15884 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC23.2■■□□□ 1.3
TCF4P15884 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.3
TCF4P15884 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
TCF4P15884 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
TCF4P15884 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC23.2■■□□□ 1.3
TCF4P15884 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
TCF4P15884 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC23.2■■□□□ 1.3
TCF4P15884 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC23.2■■□□□ 1.3
TCF4P15884 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC23.2■■□□□ 1.3
TCF4P15884 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
TCF4P15884 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
TCF4P15884 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
TCF4P15884 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC23.19■■□□□ 1.3
TCF4P15884 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC23.19■■□□□ 1.3
TCF4P15884 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
TCF4P15884 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC23.19■■□□□ 1.3
TCF4P15884 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
TCF4P15884 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
TCF4P15884 GUSBP5-202ENST00000510805 1989 ntBASIC23.19■■□□□ 1.3
TCF4P15884 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
TCF4P15884 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC23.19■■□□□ 1.3
TCF4P15884 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
TCF4P15884 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC23.18■■□□□ 1.3
TCF4P15884 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
TCF4P15884 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC23.18■■□□□ 1.3
TCF4P15884 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC23.18■■□□□ 1.3
TCF4P15884 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
TCF4P15884 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
TCF4P15884 STK25-234ENST00000535007 2459 ntTSL 2 BASIC23.18■■□□□ 1.3
TCF4P15884 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC23.18■■□□□ 1.3
TCF4P15884 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
TCF4P15884 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC23.18■■□□□ 1.3
TCF4P15884 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
TCF4P15884 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC23.18■■□□□ 1.3
TCF4P15884 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
TCF4P15884 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
TCF4P15884 FP325331.1-202ENST00000623531 1380 ntBASIC23.17■■□□□ 1.3
TCF4P15884 RASSF1-AS1-201ENST00000629828 790 ntBASIC23.17■■□□□ 1.3
TCF4P15884 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
TCF4P15884 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
TCF4P15884 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
TCF4P15884 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
TCF4P15884 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
TCF4P15884 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
TCF4P15884 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC23.16■■□□□ 1.3
TCF4P15884 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
TCF4P15884 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
TCF4P15884 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC23.16■■□□□ 1.3
TCF4P15884 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
TCF4P15884 AC079834.2-201ENST00000609776 1949 ntBASIC23.16■■□□□ 1.3
TCF4P15884 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
TCF4P15884 DUX4L4-201ENST00000566884 1269 ntBASIC23.16■■□□□ 1.3
TCF4P15884 GRAMD4P7-201ENST00000578182 1232 ntBASIC23.16■■□□□ 1.3
TCF4P15884 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
TCF4P15884 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
TCF4P15884 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC23.16■■□□□ 1.3
TCF4P15884 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
TCF4P15884 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
TCF4P15884 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC23.15■■□□□ 1.3
TCF4P15884 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
TCF4P15884 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
TCF4P15884 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC23.15■■□□□ 1.3
TCF4P15884 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC23.15■■□□□ 1.3
TCF4P15884 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
TCF4P15884 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC23.15■■□□□ 1.3
TCF4P15884 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
TCF4P15884 VGF-203ENST00000611537 1622 ntTSL 5 BASIC23.15■■□□□ 1.3
TCF4P15884 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
TCF4P15884 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC23.14■■□□□ 1.3
TCF4P15884 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
TCF4P15884 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
TCF4P15884 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
TCF4P15884 AL117332.1-201ENST00000622628 974 ntBASIC23.14■■□□□ 1.29
TCF4P15884 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC23.14■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms