Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
FREM3P0C091 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
FREM3P0C091 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
FREM3P0C091 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
FREM3P0C091 AC010525.1-201ENST00000585559 441 ntBASIC20.24■□□□□ 0.83
FREM3P0C091 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC20.24■□□□□ 0.83
FREM3P0C091 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
FREM3P0C091 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
FREM3P0C091 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
FREM3P0C091 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
FREM3P0C091 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
FREM3P0C091 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
FREM3P0C091 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
FREM3P0C091 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
FREM3P0C091 MIR4767-201ENST00000582827 78 ntBASIC20.24■□□□□ 0.83
FREM3P0C091 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC20.24■□□□□ 0.83
FREM3P0C091 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
FREM3P0C091 RASA4CP-201ENST00000424092 1398 ntBASIC20.23■□□□□ 0.83
FREM3P0C091 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
FREM3P0C091 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
FREM3P0C091 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC20.23■□□□□ 0.83
FREM3P0C091 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC20.23■□□□□ 0.83
FREM3P0C091 AC105265.2-201ENST00000467189 838 ntBASIC20.23■□□□□ 0.83
FREM3P0C091 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
FREM3P0C091 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC20.23■□□□□ 0.83
FREM3P0C091 DUSP8P5-201ENST00000422884 1815 ntBASIC20.23■□□□□ 0.83
FREM3P0C091 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
FREM3P0C091 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
FREM3P0C091 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
FREM3P0C091 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC20.23■□□□□ 0.83
FREM3P0C091 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
FREM3P0C091 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC20.23■□□□□ 0.83
FREM3P0C091 MIR935-201ENST00000401179 91 ntBASIC20.23■□□□□ 0.83
FREM3P0C091 MIR939-201ENST00000401314 82 ntBASIC20.23■□□□□ 0.83
FREM3P0C091 AC026271.2-201ENST00000428091 497 ntBASIC20.23■□□□□ 0.83
FREM3P0C091 AL136967.2-201ENST00000623968 743 ntBASIC20.23■□□□□ 0.83
FREM3P0C091 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
FREM3P0C091 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
FREM3P0C091 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC20.22■□□□□ 0.83
FREM3P0C091 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
FREM3P0C091 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC20.22■□□□□ 0.83
FREM3P0C091 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
FREM3P0C091 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
FREM3P0C091 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC20.22■□□□□ 0.83
FREM3P0C091 AC008764.7-201ENST00000593779 1081 ntBASIC20.22■□□□□ 0.83
FREM3P0C091 AL355001.2-201ENST00000620617 1191 ntBASIC20.22■□□□□ 0.83
FREM3P0C091 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
FREM3P0C091 NFE2L3P1-201ENST00000588207 1959 ntBASIC20.22■□□□□ 0.83
FREM3P0C091 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
FREM3P0C091 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
FREM3P0C091 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
FREM3P0C091 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
FREM3P0C091 ME2-208ENST00000638937 2471 ntTSL 5 BASIC20.21■□□□□ 0.83
FREM3P0C091 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
FREM3P0C091 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC20.21■□□□□ 0.83
FREM3P0C091 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
FREM3P0C091 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
FREM3P0C091 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC20.21■□□□□ 0.83
FREM3P0C091 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
FREM3P0C091 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC20.21■□□□□ 0.83
FREM3P0C091 RARRES2P6-201ENST00000567333 442 ntBASIC20.21■□□□□ 0.83
FREM3P0C091 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
FREM3P0C091 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
FREM3P0C091 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
FREM3P0C091 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
FREM3P0C091 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC20.2■□□□□ 0.82
FREM3P0C091 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
FREM3P0C091 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
FREM3P0C091 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
FREM3P0C091 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
FREM3P0C091 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
FREM3P0C091 AC099791.1-201ENST00000416440 715 ntBASIC20.2■□□□□ 0.82
FREM3P0C091 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC20.2■□□□□ 0.82
FREM3P0C091 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC20.2■□□□□ 0.82
FREM3P0C091 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC20.19■□□□□ 0.82
FREM3P0C091 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC20.19■□□□□ 0.82
FREM3P0C091 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
FREM3P0C091 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
FREM3P0C091 MIR3181-201ENST00000578512 73 ntBASIC20.19■□□□□ 0.82
FREM3P0C091 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
FREM3P0C091 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC20.19■□□□□ 0.82
FREM3P0C091 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
FREM3P0C091 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
FREM3P0C091 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC20.18■□□□□ 0.82
FREM3P0C091 HYI-206ENST00000372434 1025 ntTSL 5 BASIC20.18■□□□□ 0.82
FREM3P0C091 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
FREM3P0C091 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
FREM3P0C091 AC009086.3-201ENST00000623486 1008 ntBASIC20.18■□□□□ 0.82
FREM3P0C091 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
FREM3P0C091 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
FREM3P0C091 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC20.17■□□□□ 0.82
FREM3P0C091 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC20.17■□□□□ 0.82
FREM3P0C091 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
FREM3P0C091 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
FREM3P0C091 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
FREM3P0C091 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
FREM3P0C091 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC20.17■□□□□ 0.82
FREM3P0C091 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
FREM3P0C091 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC20.17■□□□□ 0.82
FREM3P0C091 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms