Protein–RNA interactions for Protein: P01906

HLA-DQA2, HLA class II histocompatibility antigen, DQ alpha 2 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA2P01906 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HLA-DQA2P01906 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
HLA-DQA2P01906 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
HLA-DQA2P01906 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC19.9■□□□□ 0.78
HLA-DQA2P01906 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HLA-DQA2P01906 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC19.9■□□□□ 0.78
HLA-DQA2P01906 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
HLA-DQA2P01906 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HLA-DQA2P01906 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
HLA-DQA2P01906 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.89■□□□□ 0.77
HLA-DQA2P01906 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
HLA-DQA2P01906 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
HLA-DQA2P01906 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC19.89■□□□□ 0.77
HLA-DQA2P01906 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
HLA-DQA2P01906 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
HLA-DQA2P01906 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
HLA-DQA2P01906 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
HLA-DQA2P01906 COMT-203ENST00000403184 2217 ntTSL 2 BASIC19.89■□□□□ 0.77
HLA-DQA2P01906 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
HLA-DQA2P01906 BX664725.1-201ENST00000438252 379 ntBASIC19.89■□□□□ 0.77
HLA-DQA2P01906 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC19.89■□□□□ 0.77
HLA-DQA2P01906 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC19.89■□□□□ 0.77
HLA-DQA2P01906 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
HLA-DQA2P01906 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
HLA-DQA2P01906 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HLA-DQA2P01906 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC19.88■□□□□ 0.77
HLA-DQA2P01906 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HLA-DQA2P01906 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HLA-DQA2P01906 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
HLA-DQA2P01906 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC19.87■□□□□ 0.77
HLA-DQA2P01906 AL353803.4-201ENST00000565882 1934 ntBASIC19.87■□□□□ 0.77
HLA-DQA2P01906 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HLA-DQA2P01906 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
HLA-DQA2P01906 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HLA-DQA2P01906 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HLA-DQA2P01906 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HLA-DQA2P01906 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
HLA-DQA2P01906 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC19.86■□□□□ 0.77
HLA-DQA2P01906 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
HLA-DQA2P01906 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
HLA-DQA2P01906 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC19.86■□□□□ 0.77
HLA-DQA2P01906 SENP5-202ENST00000419026 973 ntTSL 3 BASIC19.86■□□□□ 0.77
HLA-DQA2P01906 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC19.86■□□□□ 0.77
HLA-DQA2P01906 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
HLA-DQA2P01906 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC19.86■□□□□ 0.77
HLA-DQA2P01906 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
HLA-DQA2P01906 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
HLA-DQA2P01906 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
HLA-DQA2P01906 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HLA-DQA2P01906 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
HLA-DQA2P01906 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
HLA-DQA2P01906 TERT-206ENST00000508104 2486 ntTSL 5 BASIC19.85■□□□□ 0.77
HLA-DQA2P01906 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
HLA-DQA2P01906 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
HLA-DQA2P01906 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
HLA-DQA2P01906 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC19.85■□□□□ 0.77
HLA-DQA2P01906 CLTA-210ENST00000540080 989 ntTSL 2 BASIC19.85■□□□□ 0.77
HLA-DQA2P01906 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.85■□□□□ 0.77
HLA-DQA2P01906 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
HLA-DQA2P01906 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC19.84■□□□□ 0.77
HLA-DQA2P01906 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
HLA-DQA2P01906 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
HLA-DQA2P01906 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC19.84■□□□□ 0.77
HLA-DQA2P01906 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
HLA-DQA2P01906 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
HLA-DQA2P01906 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
HLA-DQA2P01906 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
HLA-DQA2P01906 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
HLA-DQA2P01906 AC005703.6-201ENST00000623265 1329 ntBASIC19.83■□□□□ 0.77
HLA-DQA2P01906 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
HLA-DQA2P01906 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
HLA-DQA2P01906 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
HLA-DQA2P01906 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
HLA-DQA2P01906 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
HLA-DQA2P01906 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
HLA-DQA2P01906 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC19.83■□□□□ 0.76
HLA-DQA2P01906 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
HLA-DQA2P01906 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC19.82■□□□□ 0.76
HLA-DQA2P01906 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
HLA-DQA2P01906 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
HLA-DQA2P01906 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
HLA-DQA2P01906 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC19.82■□□□□ 0.76
HLA-DQA2P01906 RNF146-205ENST00000477776 762 ntTSL 3 BASIC19.82■□□□□ 0.76
HLA-DQA2P01906 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
HLA-DQA2P01906 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HLA-DQA2P01906 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
HLA-DQA2P01906 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HLA-DQA2P01906 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
HLA-DQA2P01906 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
HLA-DQA2P01906 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
HLA-DQA2P01906 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
HLA-DQA2P01906 AC021242.3-201ENST00000607598 1377 ntBASIC19.82■□□□□ 0.76
HLA-DQA2P01906 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
HLA-DQA2P01906 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HLA-DQA2P01906 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HLA-DQA2P01906 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
HLA-DQA2P01906 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
HLA-DQA2P01906 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC19.81■□□□□ 0.76
HLA-DQA2P01906 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC19.81■□□□□ 0.76
HLA-DQA2P01906 KRT125P-201ENST00000546827 989 ntBASIC19.81■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 159.4 ms