Protein–RNA interactions for Protein: O43543

XRCC2, DNA repair protein XRCC2, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC2O43543 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
XRCC2O43543 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
XRCC2O43543 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC19.26■□□□□ 0.67
XRCC2O43543 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC19.26■□□□□ 0.67
XRCC2O43543 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC19.26■□□□□ 0.67
XRCC2O43543 TRIR-205ENST00000592273 783 ntTSL 3 BASIC19.26■□□□□ 0.67
XRCC2O43543 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
XRCC2O43543 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
XRCC2O43543 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
XRCC2O43543 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
XRCC2O43543 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
XRCC2O43543 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
XRCC2O43543 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
XRCC2O43543 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC19.25■□□□□ 0.67
XRCC2O43543 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
XRCC2O43543 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
XRCC2O43543 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
XRCC2O43543 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
XRCC2O43543 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC19.25■□□□□ 0.67
XRCC2O43543 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
XRCC2O43543 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
XRCC2O43543 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
XRCC2O43543 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
XRCC2O43543 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
XRCC2O43543 ASB1-202ENST00000409297 878 ntTSL 5 BASIC19.24■□□□□ 0.67
XRCC2O43543 GUSBP5-201ENST00000418136 578 ntBASIC19.24■□□□□ 0.67
XRCC2O43543 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC19.24■□□□□ 0.67
XRCC2O43543 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC19.24■□□□□ 0.67
XRCC2O43543 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
XRCC2O43543 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC19.24■□□□□ 0.67
XRCC2O43543 DUX4L4-201ENST00000566884 1269 ntBASIC19.24■□□□□ 0.67
XRCC2O43543 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
XRCC2O43543 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
XRCC2O43543 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
XRCC2O43543 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
XRCC2O43543 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
XRCC2O43543 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
XRCC2O43543 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
XRCC2O43543 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
XRCC2O43543 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
XRCC2O43543 NKILA-201ENST00000613231 537 ntTSL 4 BASIC19.23■□□□□ 0.67
XRCC2O43543 AC009086.3-201ENST00000623486 1008 ntBASIC19.23■□□□□ 0.67
XRCC2O43543 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
XRCC2O43543 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC19.23■□□□□ 0.67
XRCC2O43543 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC19.23■□□□□ 0.67
XRCC2O43543 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC19.23■□□□□ 0.67
XRCC2O43543 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
XRCC2O43543 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
XRCC2O43543 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
XRCC2O43543 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
XRCC2O43543 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
XRCC2O43543 AK3-203ENST00000447596 705 ntTSL 2 BASIC19.22■□□□□ 0.67
XRCC2O43543 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC19.22■□□□□ 0.67
XRCC2O43543 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
XRCC2O43543 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC19.22■□□□□ 0.67
XRCC2O43543 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
XRCC2O43543 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
XRCC2O43543 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC19.22■□□□□ 0.67
XRCC2O43543 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC19.21■□□□□ 0.67
XRCC2O43543 GALC-202ENST00000393568 2054 ntTSL 2 BASIC19.21■□□□□ 0.67
XRCC2O43543 C17orf82-201ENST00000623772 1530 ntBASIC19.21■□□□□ 0.67
XRCC2O43543 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC19.21■□□□□ 0.67
XRCC2O43543 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC19.21■□□□□ 0.67
XRCC2O43543 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
XRCC2O43543 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
XRCC2O43543 CLDN5-201ENST00000403084 2357 ntBASIC19.21■□□□□ 0.67
XRCC2O43543 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
XRCC2O43543 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
XRCC2O43543 C1orf229-201ENST00000623686 2258 ntBASIC19.21■□□□□ 0.67
XRCC2O43543 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
XRCC2O43543 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC19.2■□□□□ 0.66
XRCC2O43543 ESRRAP2-201ENST00000418437 1549 ntBASIC19.2■□□□□ 0.66
XRCC2O43543 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC19.2■□□□□ 0.66
XRCC2O43543 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
XRCC2O43543 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
XRCC2O43543 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
XRCC2O43543 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC19.2■□□□□ 0.66
XRCC2O43543 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC19.2■□□□□ 0.66
XRCC2O43543 AL117332.1-201ENST00000622628 974 ntBASIC19.2■□□□□ 0.66
XRCC2O43543 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC19.2■□□□□ 0.66
XRCC2O43543 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC19.2■□□□□ 0.66
XRCC2O43543 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
XRCC2O43543 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
XRCC2O43543 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC19.19■□□□□ 0.66
XRCC2O43543 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
XRCC2O43543 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC19.19■□□□□ 0.66
XRCC2O43543 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
XRCC2O43543 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC19.19■□□□□ 0.66
XRCC2O43543 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC19.19■□□□□ 0.66
XRCC2O43543 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
XRCC2O43543 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
XRCC2O43543 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
XRCC2O43543 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
XRCC2O43543 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
XRCC2O43543 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
XRCC2O43543 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
XRCC2O43543 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
XRCC2O43543 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
XRCC2O43543 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
XRCC2O43543 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 63.2 ms