Protein–RNA interactions for Protein: A0A0A6YYK1

TRAV8-1, T-cell receptor alpha variable 8-1 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-1A0A0A6YYK1 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC16.87■□□□□ 0.29
TRAV8-1A0A0A6YYK1 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
TRAV8-1A0A0A6YYK1 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TRAV8-1A0A0A6YYK1 AC139530.1-201ENST00000575312 1977 ntBASIC16.87■□□□□ 0.29
TRAV8-1A0A0A6YYK1 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRAV8-1A0A0A6YYK1 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRAV8-1A0A0A6YYK1 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TRAV8-1A0A0A6YYK1 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TRAV8-1A0A0A6YYK1 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV8-1A0A0A6YYK1 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC16.86■□□□□ 0.29
TRAV8-1A0A0A6YYK1 AL353803.4-201ENST00000565882 1934 ntBASIC16.86■□□□□ 0.29
TRAV8-1A0A0A6YYK1 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV8-1A0A0A6YYK1 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV8-1A0A0A6YYK1 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
TRAV8-1A0A0A6YYK1 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV8-1A0A0A6YYK1 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV8-1A0A0A6YYK1 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV8-1A0A0A6YYK1 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC16.86■□□□□ 0.29
TRAV8-1A0A0A6YYK1 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC16.86■□□□□ 0.29
TRAV8-1A0A0A6YYK1 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC16.86■□□□□ 0.29
TRAV8-1A0A0A6YYK1 GAK-223ENST00000628912 497 ntTSL 5 BASIC16.86■□□□□ 0.29
TRAV8-1A0A0A6YYK1 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
TRAV8-1A0A0A6YYK1 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV8-1A0A0A6YYK1 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV8-1A0A0A6YYK1 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC16.85■□□□□ 0.29
TRAV8-1A0A0A6YYK1 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC16.85■□□□□ 0.29
TRAV8-1A0A0A6YYK1 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
TRAV8-1A0A0A6YYK1 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRAV8-1A0A0A6YYK1 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
TRAV8-1A0A0A6YYK1 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
TRAV8-1A0A0A6YYK1 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TRAV8-1A0A0A6YYK1 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC16.85■□□□□ 0.29
TRAV8-1A0A0A6YYK1 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC16.85■□□□□ 0.29
TRAV8-1A0A0A6YYK1 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRAV8-1A0A0A6YYK1 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC16.85■□□□□ 0.29
TRAV8-1A0A0A6YYK1 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRAV8-1A0A0A6YYK1 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
TRAV8-1A0A0A6YYK1 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC16.84■□□□□ 0.29
TRAV8-1A0A0A6YYK1 C11orf96-202ENST00000528572 1834 ntBASIC16.84■□□□□ 0.29
TRAV8-1A0A0A6YYK1 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC16.84■□□□□ 0.29
TRAV8-1A0A0A6YYK1 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC16.84■□□□□ 0.29
TRAV8-1A0A0A6YYK1 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRAV8-1A0A0A6YYK1 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC16.84■□□□□ 0.29
TRAV8-1A0A0A6YYK1 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC16.84■□□□□ 0.29
TRAV8-1A0A0A6YYK1 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRAV8-1A0A0A6YYK1 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TRAV8-1A0A0A6YYK1 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TRAV8-1A0A0A6YYK1 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC16.84■□□□□ 0.29
TRAV8-1A0A0A6YYK1 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC16.84■□□□□ 0.29
TRAV8-1A0A0A6YYK1 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRAV8-1A0A0A6YYK1 AC092053.2-201ENST00000640557 1818 ntBASIC16.84■□□□□ 0.29
TRAV8-1A0A0A6YYK1 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
TRAV8-1A0A0A6YYK1 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRAV8-1A0A0A6YYK1 AC080038.3-201ENST00000623346 1952 ntBASIC16.84■□□□□ 0.29
TRAV8-1A0A0A6YYK1 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRAV8-1A0A0A6YYK1 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC16.84■□□□□ 0.29
TRAV8-1A0A0A6YYK1 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRAV8-1A0A0A6YYK1 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
TRAV8-1A0A0A6YYK1 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRAV8-1A0A0A6YYK1 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRAV8-1A0A0A6YYK1 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC16.83■□□□□ 0.28
TRAV8-1A0A0A6YYK1 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TRAV8-1A0A0A6YYK1 FBXW4P1-201ENST00000426721 2239 ntBASIC16.83■□□□□ 0.28
TRAV8-1A0A0A6YYK1 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRAV8-1A0A0A6YYK1 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
TRAV8-1A0A0A6YYK1 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC16.83■□□□□ 0.28
TRAV8-1A0A0A6YYK1 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC16.83■□□□□ 0.28
TRAV8-1A0A0A6YYK1 AL024507.2-201ENST00000606070 2574 ntBASIC16.83■□□□□ 0.28
TRAV8-1A0A0A6YYK1 BID-212ENST00000614949 1988 ntTSL 5 BASIC16.83■□□□□ 0.28
TRAV8-1A0A0A6YYK1 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC16.83■□□□□ 0.28
TRAV8-1A0A0A6YYK1 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRAV8-1A0A0A6YYK1 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRAV8-1A0A0A6YYK1 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC16.82■□□□□ 0.28
TRAV8-1A0A0A6YYK1 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
TRAV8-1A0A0A6YYK1 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
TRAV8-1A0A0A6YYK1 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRAV8-1A0A0A6YYK1 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRAV8-1A0A0A6YYK1 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
TRAV8-1A0A0A6YYK1 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC16.82■□□□□ 0.28
TRAV8-1A0A0A6YYK1 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRAV8-1A0A0A6YYK1 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC16.82■□□□□ 0.28
TRAV8-1A0A0A6YYK1 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
TRAV8-1A0A0A6YYK1 AC129492.7-201ENST00000622992 756 ntBASIC16.82■□□□□ 0.28
TRAV8-1A0A0A6YYK1 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRAV8-1A0A0A6YYK1 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRAV8-1A0A0A6YYK1 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TRAV8-1A0A0A6YYK1 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
TRAV8-1A0A0A6YYK1 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRAV8-1A0A0A6YYK1 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TRAV8-1A0A0A6YYK1 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
TRAV8-1A0A0A6YYK1 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRAV8-1A0A0A6YYK1 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRAV8-1A0A0A6YYK1 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TRAV8-1A0A0A6YYK1 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TRAV8-1A0A0A6YYK1 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRAV8-1A0A0A6YYK1 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRAV8-1A0A0A6YYK1 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRAV8-1A0A0A6YYK1 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRAV8-1A0A0A6YYK1 LBH-205ENST00000407930 756 ntTSL 2 BASIC16.81■□□□□ 0.28
TRAV8-1A0A0A6YYK1 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms