Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC21.22■□□□□ 0.99
CCDC187A0A096LP49 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CCDC187A0A096LP49 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CCDC187A0A096LP49 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
CCDC187A0A096LP49 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
CCDC187A0A096LP49 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CCDC187A0A096LP49 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
CCDC187A0A096LP49 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CCDC187A0A096LP49 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC21.21■□□□□ 0.99
CCDC187A0A096LP49 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC21.21■□□□□ 0.99
CCDC187A0A096LP49 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CCDC187A0A096LP49 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
CCDC187A0A096LP49 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CCDC187A0A096LP49 ME3-201ENST00000323418 1068 ntTSL 5 BASIC21.21■□□□□ 0.99
CCDC187A0A096LP49 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC21.21■□□□□ 0.99
CCDC187A0A096LP49 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC21.21■□□□□ 0.99
CCDC187A0A096LP49 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
CCDC187A0A096LP49 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC21.21■□□□□ 0.99
CCDC187A0A096LP49 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CCDC187A0A096LP49 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CCDC187A0A096LP49 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC21.21■□□□□ 0.99
CCDC187A0A096LP49 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
CCDC187A0A096LP49 LINC01529-204ENST00000636474 1715 ntBASIC21.21■□□□□ 0.99
CCDC187A0A096LP49 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
CCDC187A0A096LP49 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC187A0A096LP49 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC21.2■□□□□ 0.98
CCDC187A0A096LP49 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC187A0A096LP49 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC21.2■□□□□ 0.98
CCDC187A0A096LP49 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC21.2■□□□□ 0.98
CCDC187A0A096LP49 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC21.2■□□□□ 0.98
CCDC187A0A096LP49 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC187A0A096LP49 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC21.2■□□□□ 0.98
CCDC187A0A096LP49 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC187A0A096LP49 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC187A0A096LP49 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC21.19■□□□□ 0.98
CCDC187A0A096LP49 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC21.19■□□□□ 0.98
CCDC187A0A096LP49 AC144652.1-201ENST00000609974 1624 ntBASIC21.19■□□□□ 0.98
CCDC187A0A096LP49 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC187A0A096LP49 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC187A0A096LP49 MFF-208ENST00000409616 1247 ntTSL 5 BASIC21.19■□□□□ 0.98
CCDC187A0A096LP49 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC187A0A096LP49 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC187A0A096LP49 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC21.19■□□□□ 0.98
CCDC187A0A096LP49 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC187A0A096LP49 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
CCDC187A0A096LP49 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC187A0A096LP49 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC187A0A096LP49 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC187A0A096LP49 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
CCDC187A0A096LP49 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
CCDC187A0A096LP49 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
CCDC187A0A096LP49 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC187A0A096LP49 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC187A0A096LP49 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC187A0A096LP49 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC187A0A096LP49 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC187A0A096LP49 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC187A0A096LP49 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC21.17■□□□□ 0.98
CCDC187A0A096LP49 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC21.17■□□□□ 0.98
CCDC187A0A096LP49 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC21.17■□□□□ 0.98
CCDC187A0A096LP49 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC21.17■□□□□ 0.98
CCDC187A0A096LP49 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
CCDC187A0A096LP49 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC187A0A096LP49 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC187A0A096LP49 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC187A0A096LP49 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
CCDC187A0A096LP49 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC21.17■□□□□ 0.98
CCDC187A0A096LP49 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC21.16■□□□□ 0.98
CCDC187A0A096LP49 AC022211.4-201ENST00000625094 2161 ntBASIC21.16■□□□□ 0.98
CCDC187A0A096LP49 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC187A0A096LP49 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC187A0A096LP49 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC187A0A096LP49 STX4-202ENST00000394998 1498 ntTSL 2 BASIC21.16■□□□□ 0.98
CCDC187A0A096LP49 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC187A0A096LP49 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC21.15■□□□□ 0.98
CCDC187A0A096LP49 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC187A0A096LP49 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC187A0A096LP49 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC187A0A096LP49 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC187A0A096LP49 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC187A0A096LP49 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC21.15■□□□□ 0.98
CCDC187A0A096LP49 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
CCDC187A0A096LP49 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC21.15■□□□□ 0.98
CCDC187A0A096LP49 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC21.15■□□□□ 0.98
CCDC187A0A096LP49 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC21.15■□□□□ 0.98
CCDC187A0A096LP49 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC21.15■□□□□ 0.98
CCDC187A0A096LP49 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC187A0A096LP49 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC21.15■□□□□ 0.98
CCDC187A0A096LP49 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC187A0A096LP49 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CCDC187A0A096LP49 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CCDC187A0A096LP49 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CCDC187A0A096LP49 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
CCDC187A0A096LP49 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CCDC187A0A096LP49 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CCDC187A0A096LP49 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CCDC187A0A096LP49 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC21.14■□□□□ 0.97
CCDC187A0A096LP49 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CCDC187A0A096LP49 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CCDC187A0A096LP49 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms