Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC12.71□□□□□ -0.37
HPS1Q92902 AL139099.5-201ENST00000635274 300 ntBASIC12.71□□□□□ -0.37
HPS1Q92902 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
HPS1Q92902 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC12.71□□□□□ -0.37
HPS1Q92902 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC12.71□□□□□ -0.37
HPS1Q92902 CNTNAP5-202ENST00000431078 5284 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
HPS1Q92902 GPR39-201ENST00000329321 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
HPS1Q92902 CNTROB-203ENST00000565740 2783 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
HPS1Q92902 ASS1-203ENST00000372393 1548 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
HPS1Q92902 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
HPS1Q92902 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC12.71□□□□□ -0.38
HPS1Q92902 GHITM-201ENST00000372134 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
HPS1Q92902 TLN2-202ENST00000472902 2116 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
HPS1Q92902 DSN1-204ENST00000426836 2441 ntAPPRIS P3 TSL 2 BASIC12.71□□□□□ -0.38
HPS1Q92902 MCF2L-213ENST00000421756 3560 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
HPS1Q92902 SH3BP2-203ENST00000442312 9211 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.38
HPS1Q92902 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
HPS1Q92902 FBXO44-202ENST00000251547 2903 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
HPS1Q92902 G2E3-202ENST00000438909 2334 ntTSL 2 BASIC12.71□□□□□ -0.38
HPS1Q92902 SHC1-202ENST00000368445 3472 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.38
HPS1Q92902 AC068580.3-201ENST00000449248 2015 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
HPS1Q92902 CCDC88C-204ENST00000389857 7474 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
HPS1Q92902 CTNS-201ENST00000046640 2866 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
HPS1Q92902 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
HPS1Q92902 PLAT-203ENST00000429089 2599 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
HPS1Q92902 FLJ30679-201ENST00000624773 1980 ntBASIC12.7□□□□□ -0.38
HPS1Q92902 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC12.7□□□□□ -0.38
HPS1Q92902 SCARB2-215ENST00000639145 4471 ntAPPRIS ALT1 TSL 5 BASIC12.7□□□□□ -0.38
HPS1Q92902 RC3H2-201ENST00000335387 3081 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
HPS1Q92902 DACH2-201ENST00000373125 2232 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
HPS1Q92902 ERAL1-201ENST00000254928 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
HPS1Q92902 XRCC6-201ENST00000359308 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
HPS1Q92902 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC12.7□□□□□ -0.38
HPS1Q92902 SGSM3-201ENST00000248929 2969 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
HPS1Q92902 AC008806.1-201ENST00000624962 2443 ntBASIC12.7□□□□□ -0.38
HPS1Q92902 ROBO1-201ENST00000436010 7501 ntTSL 5 BASIC12.7□□□□□ -0.38
HPS1Q92902 MYO9A-202ENST00000424560 4008 ntTSL 5 BASIC12.7□□□□□ -0.38
HPS1Q92902 RB1-201ENST00000267163 4840 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
HPS1Q92902 CYP2J2-201ENST00000371204 1896 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
HPS1Q92902 GFRA2-202ENST00000517328 2104 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
HPS1Q92902 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
HPS1Q92902 GRN-222ENST00000639447 1314 ntTSL 2 BASIC12.7□□□□□ -0.38
HPS1Q92902 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC12.7□□□□□ -0.38
HPS1Q92902 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
HPS1Q92902 ZNF747-201ENST00000252799 3936 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
HPS1Q92902 MAN2B2-201ENST00000285599 5143 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
HPS1Q92902 PLEKHA2-207ENST00000616834 3594 ntTSL 5 BASIC12.7□□□□□ -0.38
HPS1Q92902 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
HPS1Q92902 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
HPS1Q92902 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
HPS1Q92902 TCEAL8-201ENST00000360000 1131 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
HPS1Q92902 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
HPS1Q92902 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
HPS1Q92902 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC12.7□□□□□ -0.38
HPS1Q92902 RPS14P4-201ENST00000415880 418 ntBASIC12.7□□□□□ -0.38
HPS1Q92902 PFN2-202ENST00000423691 911 ntTSL 2 BASIC12.7□□□□□ -0.38
HPS1Q92902 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC12.7□□□□□ -0.38
HPS1Q92902 AC007969.1-201ENST00000433675 447 ntBASIC12.7□□□□□ -0.38
HPS1Q92902 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC12.7□□□□□ -0.38
HPS1Q92902 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC12.7□□□□□ -0.38
HPS1Q92902 AC104306.2-201ENST00000451877 341 ntBASIC12.7□□□□□ -0.38
HPS1Q92902 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC12.7□□□□□ -0.38
HPS1Q92902 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC12.7□□□□□ -0.38
HPS1Q92902 AL022319.1-201ENST00000458183 1167 ntBASIC12.7□□□□□ -0.38
HPS1Q92902 OARD1-212ENST00000482515 832 ntTSL 2 BASIC12.7□□□□□ -0.38
HPS1Q92902 HAUS1P1-201ENST00000505275 832 ntBASIC12.7□□□□□ -0.38
HPS1Q92902 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
HPS1Q92902 AC022784.5-201ENST00000522241 437 ntBASIC12.7□□□□□ -0.38
HPS1Q92902 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC12.7□□□□□ -0.38
HPS1Q92902 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC12.7□□□□□ -0.38
HPS1Q92902 C2orf69P2-201ENST00000562032 1123 ntBASIC12.7□□□□□ -0.38
HPS1Q92902 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC12.7□□□□□ -0.38
HPS1Q92902 IGHV3OR16-16-201ENST00000563644 343 ntBASIC12.7□□□□□ -0.38
HPS1Q92902 HNRNPA1P48-202ENST00000565308 961 ntBASIC12.7□□□□□ -0.38
HPS1Q92902 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
HPS1Q92902 MIR4741-201ENST00000579822 90 ntBASIC12.7□□□□□ -0.38
HPS1Q92902 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC12.7□□□□□ -0.38
HPS1Q92902 AL008638.5-201ENST00000623814 1298 ntBASIC12.7□□□□□ -0.38
HPS1Q92902 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC12.7□□□□□ -0.38
HPS1Q92902 ABBA01031663.1-201ENST00000635630 790 ntBASIC12.7□□□□□ -0.38
HPS1Q92902 AL355860.1-201ENST00000636087 1229 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
HPS1Q92902 AR-208ENST00000612452 10676 ntTSL 5 BASIC12.7□□□□□ -0.38
HPS1Q92902 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
HPS1Q92902 NUMA1-233ENST00000616538 6998 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
HPS1Q92902 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
HPS1Q92902 AL391845.2-201ENST00000443930 1954 ntTSL 2 BASIC12.7□□□□□ -0.38
HPS1Q92902 ZSCAN32-202ENST00000396846 3173 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
HPS1Q92902 ZSCAN32-203ENST00000396852 3169 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
HPS1Q92902 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
HPS1Q92902 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC12.7□□□□□ -0.38
HPS1Q92902 TSPEAR-201ENST00000323084 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
HPS1Q92902 PSMD12-201ENST00000356126 4406 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
HPS1Q92902 YWHAB-201ENST00000353703 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
HPS1Q92902 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
HPS1Q92902 ANKRD30BP2-201ENST00000435744 1610 ntBASIC12.7□□□□□ -0.38
HPS1Q92902 PCNA-202ENST00000379160 1359 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
HPS1Q92902 CXorf40A-212ENST00000514208 1840 ntAPPRIS ALT1 TSL 5 BASIC12.69□□□□□ -0.38
HPS1Q92902 PPP1R12A-201ENST00000261207 5582 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
HPS1Q92902 GRAMD1B-215ENST00000638086 2665 ntTSL 5 BASIC12.69□□□□□ -0.38
HPS1Q92902 APOBEC3D-202ENST00000427494 1961 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms