Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 NTRK2-203ENST00000323115 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CCDC50Q8IVM0 AC010547.1-201ENST00000500612 2793 ntTSL 2 BASIC14.46□□□□□ -0.09
CCDC50Q8IVM0 PPP4R3B-206ENST00000616407 4385 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CCDC50Q8IVM0 NRDC-214ENST00000544028 3819 ntTSL 5 BASIC14.46□□□□□ -0.09
CCDC50Q8IVM0 AC036108.2-201ENST00000566974 2562 ntTSL 2 BASIC14.46□□□□□ -0.09
CCDC50Q8IVM0 PLPP6-201ENST00000381883 2944 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
CCDC50Q8IVM0 PCCB-210ENST00000471595 6090 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
CCDC50Q8IVM0 VIPAS39-208ENST00000556412 1832 ntTSL 2 BASIC14.46□□□□□ -0.09
CCDC50Q8IVM0 KCND1-201ENST00000218176 4437 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CCDC50Q8IVM0 GUCY1B3-204ENST00000505154 2316 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CCDC50Q8IVM0 TAX1BP1-207ENST00000433216 3174 ntTSL 2 BASIC14.46□□□□□ -0.09
CCDC50Q8IVM0 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CCDC50Q8IVM0 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC14.46□□□□□ -0.09
CCDC50Q8IVM0 IGHV1-3-201ENST00000390595 395 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
CCDC50Q8IVM0 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
CCDC50Q8IVM0 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC14.46□□□□□ -0.09
CCDC50Q8IVM0 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC14.46□□□□□ -0.09
CCDC50Q8IVM0 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC14.46□□□□□ -0.09
CCDC50Q8IVM0 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
CCDC50Q8IVM0 AC239800.4-201ENST00000603712 296 ntBASIC14.46□□□□□ -0.09
CCDC50Q8IVM0 AL451050.2-201ENST00000606967 682 ntBASIC14.46□□□□□ -0.09
CCDC50Q8IVM0 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC14.46□□□□□ -0.09
CCDC50Q8IVM0 Six3os1_5.1-201ENST00000611000 271 ntBASIC14.46□□□□□ -0.09
CCDC50Q8IVM0 AL805961.1-203ENST00000641078 1258 ntBASIC14.46□□□□□ -0.09
CCDC50Q8IVM0 PLEKHB2-202ENST00000403716 4349 ntTSL 3 BASIC14.46□□□□□ -0.09
CCDC50Q8IVM0 VPS54-203ENST00000409558 4337 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CCDC50Q8IVM0 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CCDC50Q8IVM0 HTR5A-201ENST00000287907 2912 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CCDC50Q8IVM0 RNF111-201ENST00000348370 5913 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CCDC50Q8IVM0 SCN8A-209ENST00000627620 5943 ntAPPRIS ALT1 TSL 5 BASIC14.46□□□□□ -0.09
CCDC50Q8IVM0 DLGAP3-201ENST00000235180 3587 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
CCDC50Q8IVM0 TRGV9-201ENST00000444775 1735 ntAPPRIS P1 BASIC14.46□□□□□ -0.1
CCDC50Q8IVM0 LAS1L-202ENST00000374807 2386 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
CCDC50Q8IVM0 RBM19-201ENST00000261741 4194 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CCDC50Q8IVM0 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
CCDC50Q8IVM0 GOLGA8T-202ENST00000569052 1896 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
CCDC50Q8IVM0 YIPF1-201ENST00000072644 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CCDC50Q8IVM0 GGA1-201ENST00000325180 2528 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
CCDC50Q8IVM0 LIPA-205ENST00000456827 2527 ntTSL 3 BASIC14.46□□□□□ -0.1
CCDC50Q8IVM0 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CCDC50Q8IVM0 AL390066.1-201ENST00000456414 2302 ntTSL 2 BASIC14.46□□□□□ -0.1
CCDC50Q8IVM0 HDAC7-202ENST00000354334 4065 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
CCDC50Q8IVM0 HDAC7-201ENST00000080059 4095 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
CCDC50Q8IVM0 ALG8-202ENST00000376156 1677 ntTSL 2 BASIC14.46□□□□□ -0.1
CCDC50Q8IVM0 PRKAB1-205ENST00000540121 1673 ntTSL 5 BASIC14.46□□□□□ -0.1
CCDC50Q8IVM0 TNFRSF21-201ENST00000296861 3595 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCDC50Q8IVM0 INTS3-204ENST00000435409 3597 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
CCDC50Q8IVM0 JADE1-209ENST00000511647 3560 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCDC50Q8IVM0 KPNA4-201ENST00000334256 8981 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCDC50Q8IVM0 CCDC13-201ENST00000310232 2943 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCDC50Q8IVM0 ENOX2-204ENST00000394363 4174 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
CCDC50Q8IVM0 ITPRIP-201ENST00000278071 6807 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCDC50Q8IVM0 MPP6-202ENST00000396475 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCDC50Q8IVM0 KIF21B-202ENST00000360529 5389 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CCDC50Q8IVM0 RCC2P5-201ENST00000492126 1487 ntBASIC14.45□□□□□ -0.1
CCDC50Q8IVM0 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC14.45□□□□□ -0.1
CCDC50Q8IVM0 OPRK1-201ENST00000265572 5014 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCDC50Q8IVM0 PPP2R2C-204ENST00000506140 1780 ntTSL 2 BASIC14.45□□□□□ -0.1
CCDC50Q8IVM0 DHX16-201ENST00000376437 1933 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CCDC50Q8IVM0 TRIM35-201ENST00000305364 4229 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCDC50Q8IVM0 PXK-210ENST00000479241 2817 ntTSL 2 BASIC14.45□□□□□ -0.1
CCDC50Q8IVM0 EGLN3-205ENST00000547327 2849 ntBASIC14.45□□□□□ -0.1
CCDC50Q8IVM0 SYBU-204ENST00000408908 2983 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
CCDC50Q8IVM0 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCDC50Q8IVM0 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CCDC50Q8IVM0 BCL2L11-202ENST00000337565 720 ntTSL 5 BASIC14.45□□□□□ -0.1
CCDC50Q8IVM0 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCDC50Q8IVM0 TCF3-202ENST00000344749 4289 ntTSL 5 BASIC14.45□□□□□ -0.1
CCDC50Q8IVM0 MBP-201ENST00000354542 575 ntTSL 2 BASIC14.45□□□□□ -0.1
CCDC50Q8IVM0 FAM163B-201ENST00000356873 1131 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCDC50Q8IVM0 GK-202ENST00000378941 458 ntTSL 3 BASIC14.45□□□□□ -0.1
CCDC50Q8IVM0 KLC4-203ENST00000394056 2770 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
CCDC50Q8IVM0 CRCP-204ENST00000398684 492 ntTSL 2 BASIC14.45□□□□□ -0.1
CCDC50Q8IVM0 LBH-202ENST00000401506 485 ntTSL 3 BASIC14.45□□□□□ -0.1
CCDC50Q8IVM0 CYP46A4P-201ENST00000414953 267 ntBASIC14.45□□□□□ -0.1
CCDC50Q8IVM0 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC14.45□□□□□ -0.1
CCDC50Q8IVM0 AC073869.2-201ENST00000417338 1026 ntBASIC14.45□□□□□ -0.1
CCDC50Q8IVM0 TBC1D27-202ENST00000424239 1573 ntBASIC14.45□□□□□ -0.1
CCDC50Q8IVM0 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC14.45□□□□□ -0.1
CCDC50Q8IVM0 AC007279.1-201ENST00000448547 837 ntBASIC14.45□□□□□ -0.1
CCDC50Q8IVM0 AC011995.2-201ENST00000452701 574 ntTSL 4 BASIC14.45□□□□□ -0.1
CCDC50Q8IVM0 PFN1P12-201ENST00000455938 534 ntBASIC14.45□□□□□ -0.1
CCDC50Q8IVM0 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CCDC50Q8IVM0 INSC-205ENST00000525218 1576 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CCDC50Q8IVM0 CRADD-205ENST00000548483 1056 ntTSL 2 BASIC14.45□□□□□ -0.1
CCDC50Q8IVM0 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC14.45□□□□□ -0.1
CCDC50Q8IVM0 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC14.45□□□□□ -0.1
CCDC50Q8IVM0 NDUFB10P1-201ENST00000567319 521 ntBASIC14.45□□□□□ -0.1
CCDC50Q8IVM0 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC14.45□□□□□ -0.1
CCDC50Q8IVM0 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCDC50Q8IVM0 AL118558.3-201ENST00000607414 1079 ntBASIC14.45□□□□□ -0.1
CCDC50Q8IVM0 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC14.45□□□□□ -0.1
CCDC50Q8IVM0 AC138649.2-201ENST00000615886 705 ntBASIC14.45□□□□□ -0.1
CCDC50Q8IVM0 ACACA-237ENST00000616317 9961 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CCDC50Q8IVM0 CACNA2D2-202ENST00000360963 5272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCDC50Q8IVM0 NRXN1-233ENST00000630543 4500 ntTSL 5 BASIC14.45□□□□□ -0.1
CCDC50Q8IVM0 SLC38A7-201ENST00000219320 4392 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCDC50Q8IVM0 TBC1D8B-202ENST00000310452 2589 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CCDC50Q8IVM0 LINC01756-201ENST00000417651 2148 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CCDC50Q8IVM0 CT62-203ENST00000566432 2822 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms