Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CLK1P49759 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC12.94□□□□□ -0.34
CLK1P49759 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC12.94□□□□□ -0.34
CLK1P49759 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC12.94□□□□□ -0.34
CLK1P49759 AC125604.1-201ENST00000496255 707 ntBASIC12.94□□□□□ -0.34
CLK1P49759 AC092658.1-201ENST00000505836 891 ntBASIC12.94□□□□□ -0.34
CLK1P49759 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC12.94□□□□□ -0.34
CLK1P49759 AC044849.1-201ENST00000519737 1188 ntBASIC12.94□□□□□ -0.34
CLK1P49759 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC12.94□□□□□ -0.34
CLK1P49759 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
CLK1P49759 ARL16-210ENST00000574938 751 ntTSL 2 BASIC12.94□□□□□ -0.34
CLK1P49759 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC12.94□□□□□ -0.34
CLK1P49759 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
CLK1P49759 AC244452.3-201ENST00000636814 210 ntBASIC12.94□□□□□ -0.34
CLK1P49759 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CLK1P49759 STAT3-203ENST00000404395 2633 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CLK1P49759 C10orf105-201ENST00000398786 4730 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
CLK1P49759 MTHFR-205ENST00000376592 8378 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
CLK1P49759 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CLK1P49759 LINC01165-201ENST00000445190 1623 ntBASIC12.94□□□□□ -0.34
CLK1P49759 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
CLK1P49759 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CLK1P49759 SLC11A1-201ENST00000233202 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CLK1P49759 PARP10-203ENST00000524918 3469 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
CLK1P49759 SDR9C7-201ENST00000293502 1765 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CLK1P49759 DPP9-214ENST00000598800 3098 ntTSL 5 BASIC12.94□□□□□ -0.34
CLK1P49759 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC12.94□□□□□ -0.34
CLK1P49759 LSM14A-201ENST00000433627 3424 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CLK1P49759 BCORL1-201ENST00000218147 6860 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
CLK1P49759 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CLK1P49759 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CLK1P49759 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CLK1P49759 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CLK1P49759 STRA6-222ENST00000616000 2843 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
CLK1P49759 MSNP1-201ENST00000511640 1732 ntBASIC12.93□□□□□ -0.34
CLK1P49759 OTOF-203ENST00000339598 4756 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CLK1P49759 IKBKB-218ENST00000520835 2403 ntTSL 2 BASIC12.93□□□□□ -0.34
CLK1P49759 PHB-210ENST00000511832 1509 ntTSL 2 BASIC12.93□□□□□ -0.34
CLK1P49759 DNAJC14-202ENST00000317287 2774 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
CLK1P49759 AL590824.1-201ENST00000403828 1349 ntBASIC12.93□□□□□ -0.34
CLK1P49759 ZNF621-202ENST00000339296 6378 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CLK1P49759 ZNF407-201ENST00000299687 7948 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
CLK1P49759 PID1-203ENST00000392055 2533 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
CLK1P49759 TNRC6C-205ENST00000588061 8419 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
CLK1P49759 RAN-210ENST00000541630 1475 ntTSL 2 BASIC12.93□□□□□ -0.34
CLK1P49759 IMMT-204ENST00000410111 3001 ntAPPRIS P4 TSL 1 (best) BASIC12.93□□□□□ -0.34
CLK1P49759 AP3M2-202ENST00000396926 3545 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CLK1P49759 AC009336.2-201ENST00000468418 3521 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
CLK1P49759 APLP2-202ENST00000278756 3687 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
CLK1P49759 CHRNA2-207ENST00000520933 2497 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
CLK1P49759 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
CLK1P49759 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CLK1P49759 FAM86MP-201ENST00000340703 885 ntBASIC12.93□□□□□ -0.34
CLK1P49759 HMGA1P1-201ENST00000415560 1062 ntBASIC12.93□□□□□ -0.34
CLK1P49759 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC12.93□□□□□ -0.34
CLK1P49759 TSPY25P-201ENST00000429463 745 ntBASIC12.93□□□□□ -0.34
CLK1P49759 AC092580.1-201ENST00000433998 658 ntBASIC12.93□□□□□ -0.34
CLK1P49759 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC12.93□□□□□ -0.34
CLK1P49759 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
CLK1P49759 NKAIN1P1-201ENST00000435754 582 ntBASIC12.93□□□□□ -0.34
CLK1P49759 AC003958.1-201ENST00000435883 421 ntBASIC12.93□□□□□ -0.34
CLK1P49759 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC12.93□□□□□ -0.34
CLK1P49759 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CLK1P49759 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC12.93□□□□□ -0.34
CLK1P49759 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC12.93□□□□□ -0.34
CLK1P49759 MCRIP1-212ENST00000576730 2979 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
CLK1P49759 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC12.93□□□□□ -0.34
CLK1P49759 LAMTOR5-AS1-209ENST00000597455 805 ntBASIC12.93□□□□□ -0.34
CLK1P49759 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC12.93□□□□□ -0.34
CLK1P49759 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC12.93□□□□□ -0.34
CLK1P49759 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CLK1P49759 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CLK1P49759 DAO-201ENST00000228476 1756 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CLK1P49759 KLF7-204ENST00000423015 1788 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CLK1P49759 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC12.93□□□□□ -0.34
CLK1P49759 PLEKHG3-203ENST00000471182 3106 ntTSL 5 BASIC12.93□□□□□ -0.34
CLK1P49759 CAMKK2-205ENST00000392474 4453 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
CLK1P49759 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CLK1P49759 ENDOV-207ENST00000518907 2418 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CLK1P49759 AP002353.1-201ENST00000528257 1599 ntBASIC12.93□□□□□ -0.34
CLK1P49759 NRP2-202ENST00000357118 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
CLK1P49759 TBX4-202ENST00000393853 3398 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CLK1P49759 FRMD6-203ENST00000395718 4828 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CLK1P49759 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CLK1P49759 CNKSR3-204ENST00000479339 2023 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CLK1P49759 USP17L7-201ENST00000530447 2022 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
CLK1P49759 AC073862.5-201ENST00000624129 2027 ntBASIC12.93□□□□□ -0.34
CLK1P49759 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CLK1P49759 KIAA1549-202ENST00000440172 12379 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
CLK1P49759 BCAS4-202ENST00000371608 6680 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
CLK1P49759 MYH3-205ENST00000583535 6037 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
CLK1P49759 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CLK1P49759 RCAN2-204ENST00000405162 2457 ntTSL 5 BASIC12.93□□□□□ -0.34
CLK1P49759 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CLK1P49759 PCID2-205ENST00000375477 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CLK1P49759 POLD1-201ENST00000440232 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CLK1P49759 AC007666.1-201ENST00000443935 1838 ntTSL 5 BASIC12.92□□□□□ -0.34
CLK1P49759 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC12.92□□□□□ -0.34
CLK1P49759 PIGN-226ENST00000638591 2776 ntTSL 5 BASIC12.92□□□□□ -0.34
CLK1P49759 CSPG4P13-202ENST00000567704 4801 ntBASIC12.92□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 57.1 ms