Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 ZNF473-203ENST00000445728 2833 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
MMP13P45452 PAK3-211ENST00000518291 2098 ntTSL 5 BASIC14.19□□□□□ -0.14
MMP13P45452 HPSE2-206ENST00000628193 1760 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
MMP13P45452 RAB3D-201ENST00000222120 4273 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
MMP13P45452 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
MMP13P45452 SUPT20HL1-201ENST00000436466 2618 ntBASIC14.19□□□□□ -0.14
MMP13P45452 FAM71E2-201ENST00000424985 3191 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
MMP13P45452 GOLGA8K-202ENST00000512626 1894 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
MMP13P45452 GOLGA8T-202ENST00000569052 1896 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
MMP13P45452 DPH2-202ENST00000396758 1738 ntTSL 3 BASIC14.19□□□□□ -0.14
MMP13P45452 DDC-204ENST00000426377 1700 ntTSL 3 BASIC14.19□□□□□ -0.14
MMP13P45452 MICA-210ENST00000616296 2260 ntTSL 5 BASIC14.19□□□□□ -0.14
MMP13P45452 PACSIN2-202ENST00000337959 3149 ntTSL 5 BASIC14.19□□□□□ -0.14
MMP13P45452 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
MMP13P45452 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
MMP13P45452 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
MMP13P45452 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC14.19□□□□□ -0.14
MMP13P45452 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC14.19□□□□□ -0.14
MMP13P45452 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC14.19□□□□□ -0.14
MMP13P45452 AC005722.1-201ENST00000431878 964 ntBASIC14.19□□□□□ -0.14
MMP13P45452 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC14.19□□□□□ -0.14
MMP13P45452 GS1-124K5.4-201ENST00000445681 540 ntTSL 2 BASIC14.19□□□□□ -0.14
MMP13P45452 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
MMP13P45452 RN7SL769P-201ENST00000469386 295 ntBASIC14.19□□□□□ -0.14
MMP13P45452 COQ10BP2-201ENST00000513804 724 ntBASIC14.19□□□□□ -0.14
MMP13P45452 C12orf73-210ENST00000552940 685 ntTSL 2 BASIC14.19□□□□□ -0.14
MMP13P45452 MIR4265-201ENST00000582152 99 ntBASIC14.19□□□□□ -0.14
MMP13P45452 AL133499.1-201ENST00000596207 608 ntBASIC14.19□□□□□ -0.14
MMP13P45452 HPX-213ENST00000615166 826 ntTSL 5 BASIC14.19□□□□□ -0.14
MMP13P45452 ITGA3-201ENST00000007722 3665 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
MMP13P45452 GMEB2-203ENST00000370077 4223 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
MMP13P45452 PPP1R8-203ENST00000373931 2651 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
MMP13P45452 SHISA5-206ENST00000426002 1839 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
MMP13P45452 BEND6-202ENST00000370746 2379 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
MMP13P45452 AMOTL2-202ENST00000422605 4335 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
MMP13P45452 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
MMP13P45452 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
MMP13P45452 NCF4-201ENST00000248899 1396 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
MMP13P45452 ANXA8L1-202ENST00000611655 1398 ntTSL 2 BASIC14.19□□□□□ -0.14
MMP13P45452 PAX6-264ENST00000640125 1375 ntTSL 5 BASIC14.19□□□□□ -0.14
MMP13P45452 HNF4A-204ENST00000415691 2302 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
MMP13P45452 CHI3L1-201ENST00000255409 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
MMP13P45452 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
MMP13P45452 HDAC7-203ENST00000380610 3261 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
MMP13P45452 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
MMP13P45452 TYK2-205ENST00000525621 4347 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
MMP13P45452 MIEF2-201ENST00000323019 3364 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
MMP13P45452 AC068580.3-201ENST00000449248 2015 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
MMP13P45452 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
MMP13P45452 TRMT61A-202ENST00000389749 3229 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
MMP13P45452 LARP4-201ENST00000293618 6296 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
MMP13P45452 AC092902.2-210ENST00000468859 1996 ntTSL 2 BASIC14.18□□□□□ -0.14
MMP13P45452 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
MMP13P45452 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
MMP13P45452 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
MMP13P45452 FAM168B-202ENST00000409185 5285 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
MMP13P45452 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
MMP13P45452 SH2D5-201ENST00000375031 3705 ntTSL 2 BASIC14.18□□□□□ -0.14
MMP13P45452 GTF2IRD1P1-202ENST00000457166 2426 ntTSL 2 BASIC14.18□□□□□ -0.14
MMP13P45452 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
MMP13P45452 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
MMP13P45452 HNRNPA1-201ENST00000330752 1294 ntTSL 5 BASIC14.18□□□□□ -0.14
MMP13P45452 NSD2-209ENST00000436793 835 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
MMP13P45452 SCARNA12-201ENST00000459155 270 ntBASIC14.18□□□□□ -0.14
MMP13P45452 NDUFS6P1-201ENST00000485187 316 ntBASIC14.18□□□□□ -0.14
MMP13P45452 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC14.18□□□□□ -0.14
MMP13P45452 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
MMP13P45452 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC14.18□□□□□ -0.14
MMP13P45452 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC14.18□□□□□ -0.14
MMP13P45452 MIR4522-201ENST00000584932 87 ntBASIC14.18□□□□□ -0.14
MMP13P45452 AL031673.1-201ENST00000611460 466 ntBASIC14.18□□□□□ -0.14
MMP13P45452 SNRPA1-216ENST00000626000 539 ntTSL 5 BASIC14.18□□□□□ -0.14
MMP13P45452 CMC2-224ENST00000630396 481 ntTSL 5 BASIC14.18□□□□□ -0.14
MMP13P45452 AC020763.3-201ENST00000625095 2904 ntBASIC14.18□□□□□ -0.14
MMP13P45452 MAMDC4-201ENST00000317446 3658 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
MMP13P45452 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
MMP13P45452 PARP10-203ENST00000524918 3469 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
MMP13P45452 MCRIP1-212ENST00000576730 2979 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
MMP13P45452 CYP24A1-203ENST00000395955 2227 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
MMP13P45452 AC022400.8-201ENST00000623453 3599 ntBASIC14.18□□□□□ -0.14
MMP13P45452 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
MMP13P45452 NFKBIZ-202ENST00000326172 3923 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
MMP13P45452 MSH6-214ENST00000616033 3429 ntTSL 5 BASIC14.18□□□□□ -0.14
MMP13P45452 SEC24B-202ENST00000399100 3780 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
MMP13P45452 SNRNP27-201ENST00000244227 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
MMP13P45452 ILDR1-201ENST00000273691 2659 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
MMP13P45452 NAPEPLD-201ENST00000341533 4972 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
MMP13P45452 NRADDP-202ENST00000641269 1585 ntBASIC14.17□□□□□ -0.14
MMP13P45452 HTR3E-203ENST00000425359 1326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
MMP13P45452 PGBD1-201ENST00000259883 3100 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
MMP13P45452 TPO-202ENST00000345913 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
MMP13P45452 PIGG-217ENST00000509768 3121 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
MMP13P45452 STX3-207ENST00000633708 3111 ntTSL 5 BASIC14.17□□□□□ -0.14
MMP13P45452 BAHD1-203ENST00000561234 4698 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
MMP13P45452 RBPJ-203ENST00000345843 1682 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
MMP13P45452 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
MMP13P45452 LINC02015-202ENST00000436078 2957 ntTSL 2 BASIC14.17□□□□□ -0.14
MMP13P45452 PPM1L-201ENST00000295839 1449 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
MMP13P45452 PID1-204ENST00000409462 2387 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
MMP13P45452 MPHOSPH10-201ENST00000244230 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms