Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 CATSPERE-203ENST00000366534 3333 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
SSR1P43307 KCNA1-201ENST00000382545 7997 ntAPPRIS P1 TSL 4 BASIC14.64□□□□□ -0.07
SSR1P43307 DYRK4-201ENST00000010132 1840 ntAPPRIS P2 TSL 5 BASIC14.64□□□□□ -0.07
SSR1P43307 ERICH1-206ENST00000522706 1551 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
SSR1P43307 CDH8-201ENST00000299345 3728 ntTSL 5 BASIC14.64□□□□□ -0.07
SSR1P43307 TESMIN-204ENST00000443940 3495 ntTSL 2 BASIC14.64□□□□□ -0.07
SSR1P43307 BCL2-201ENST00000333681 3209 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SSR1P43307 ARHGAP33-203ENST00000314737 3858 ntAPPRIS P3 TSL 2 BASIC14.64□□□□□ -0.07
SSR1P43307 EPM2A-218ENST00000639465 2203 ntTSL 5 BASIC14.64□□□□□ -0.07
SSR1P43307 MSNP1-201ENST00000511640 1732 ntBASIC14.63□□□□□ -0.07
SSR1P43307 UBBP4-202ENST00000584755 1459 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
SSR1P43307 ENG-202ENST00000373203 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
SSR1P43307 FAM189A2-204ENST00000455972 2107 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
SSR1P43307 WSCD2-201ENST00000332082 4710 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SSR1P43307 CALD1-205ENST00000422748 2665 ntTSL 2 BASIC14.63□□□□□ -0.07
SSR1P43307 KLB-201ENST00000257408 6082 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SSR1P43307 AC073862.5-201ENST00000624129 2027 ntBASIC14.63□□□□□ -0.07
SSR1P43307 P2RY8-201ENST00000381297 4198 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SSR1P43307 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC14.63□□□□□ -0.07
SSR1P43307 OPN4-201ENST00000241891 2308 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SSR1P43307 PPP1R8-202ENST00000311772 2344 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SSR1P43307 RPGRIP1-202ENST00000400017 3940 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
SSR1P43307 AL845472.1-202ENST00000624675 4080 ntBASIC14.63□□□□□ -0.07
SSR1P43307 DCAF5-209ENST00000557386 2883 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SSR1P43307 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
SSR1P43307 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SSR1P43307 APOD-201ENST00000343267 1130 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
SSR1P43307 MBP-201ENST00000354542 575 ntTSL 2 BASIC14.63□□□□□ -0.07
SSR1P43307 AC239868.1-201ENST00000369385 493 ntBASIC14.63□□□□□ -0.07
SSR1P43307 AGER-203ENST00000375065 665 ntTSL 2 BASIC14.63□□□□□ -0.07
SSR1P43307 CYP46A4P-201ENST00000414953 267 ntBASIC14.63□□□□□ -0.07
SSR1P43307 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC14.63□□□□□ -0.07
SSR1P43307 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC14.63□□□□□ -0.07
SSR1P43307 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC14.63□□□□□ -0.07
SSR1P43307 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
SSR1P43307 LINC02369-202ENST00000540745 801 ntTSL 5 BASIC14.63□□□□□ -0.07
SSR1P43307 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC14.63□□□□□ -0.07
SSR1P43307 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC14.63□□□□□ -0.07
SSR1P43307 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC14.63□□□□□ -0.07
SSR1P43307 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC14.63□□□□□ -0.07
SSR1P43307 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC14.63□□□□□ -0.07
SSR1P43307 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC14.63□□□□□ -0.07
SSR1P43307 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SSR1P43307 AC091544.8-201ENST00000619490 361 ntBASIC14.63□□□□□ -0.07
SSR1P43307 DHX58-201ENST00000251642 2617 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SSR1P43307 RGL4-209ENST00000612432 2649 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
SSR1P43307 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC14.63□□□□□ -0.07
SSR1P43307 SLC36A1-201ENST00000243389 5781 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SSR1P43307 GLI3-201ENST00000395925 8208 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
SSR1P43307 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SSR1P43307 LINC01114-202ENST00000424321 2112 ntTSL 2 BASIC14.63□□□□□ -0.07
SSR1P43307 SIGLECL1-201ENST00000316401 1708 ntAPPRIS P3 TSL 2 BASIC14.63□□□□□ -0.07
SSR1P43307 BCORL1-201ENST00000218147 6860 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
SSR1P43307 WNT9A-201ENST00000272164 3971 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SSR1P43307 PLAT-201ENST00000220809 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SSR1P43307 AOC1-204ENST00000467291 2857 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
SSR1P43307 SH2D7-202ENST00000409568 2162 ntTSL 5 BASIC14.63□□□□□ -0.07
SSR1P43307 MKRN5P-201ENST00000445263 1467 ntBASIC14.63□□□□□ -0.07
SSR1P43307 PARP3-201ENST00000398755 2336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
SSR1P43307 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SSR1P43307 CCDC14-220ENST00000488653 4156 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
SSR1P43307 PNPLA8-206ENST00000436062 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SSR1P43307 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
SSR1P43307 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
SSR1P43307 B4GALT4-201ENST00000359213 2385 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
SSR1P43307 INTS6-201ENST00000311234 3662 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SSR1P43307 SYNCRIP-201ENST00000355238 6449 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SSR1P43307 ZNF148-206ENST00000485866 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SSR1P43307 GOLGA6L4-203ENST00000510439 4563 ntAPPRIS P2 TSL 5 BASIC14.62□□□□□ -0.07
SSR1P43307 TBC1D3L-201ENST00000612727 2148 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SSR1P43307 PLEKHG6-201ENST00000011684 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SSR1P43307 MKL1-213ENST00000620651 3757 ntTSL 5 BASIC14.62□□□□□ -0.07
SSR1P43307 ANKRD52-201ENST00000267116 8688 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SSR1P43307 NUDT2-201ENST00000346365 960 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SSR1P43307 VWA8-203ENST00000379310 7147 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
SSR1P43307 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
SSR1P43307 OS9-203ENST00000389142 2457 ntTSL 5 BASIC14.62□□□□□ -0.07
SSR1P43307 AC073869.2-201ENST00000417338 1026 ntBASIC14.62□□□□□ -0.07
SSR1P43307 AC136604.1-202ENST00000425471 771 ntBASIC14.62□□□□□ -0.07
SSR1P43307 DNAJB1P1-201ENST00000429417 1024 ntBASIC14.62□□□□□ -0.07
SSR1P43307 ACTBP11-201ENST00000436287 1126 ntBASIC14.62□□□□□ -0.07
SSR1P43307 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC14.62□□□□□ -0.07
SSR1P43307 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC14.62□□□□□ -0.07
SSR1P43307 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
SSR1P43307 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC14.62□□□□□ -0.07
SSR1P43307 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC14.62□□□□□ -0.07
SSR1P43307 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC14.62□□□□□ -0.07
SSR1P43307 NLRP7-207ENST00000590030 3209 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
SSR1P43307 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC14.62□□□□□ -0.07
SSR1P43307 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SSR1P43307 NUDT2-204ENST00000618590 825 ntAPPRIS P1 TSL 3 BASIC14.62□□□□□ -0.07
SSR1P43307 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
SSR1P43307 AL161773.1-201ENST00000624845 863 ntBASIC14.62□□□□□ -0.07
SSR1P43307 DYSF-206ENST00000409744 6564 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
SSR1P43307 DYSF-209ENST00000410041 6594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
SSR1P43307 KDM3A-216ENST00000542128 4311 ntTSL 5 BASIC14.62□□□□□ -0.07
SSR1P43307 KCNMA1-285ENST00000640605 3864 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
SSR1P43307 CENPL-202ENST00000356198 2357 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
SSR1P43307 ZNF568-206ENST00000455427 2378 ntTSL 2 BASIC14.62□□□□□ -0.07
SSR1P43307 OS9-218ENST00000551035 2246 ntTSL 2 BASIC14.62□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms