Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC17.85■□□□□ 0.45
USP6P35125 AC117489.1-201ENST00000625169 3217 ntBASIC17.85■□□□□ 0.45
USP6P35125 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC17.85■□□□□ 0.45
USP6P35125 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
USP6P35125 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC17.85■□□□□ 0.45
USP6P35125 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
USP6P35125 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
USP6P35125 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
USP6P35125 AP000487.2-201ENST00000324630 394 ntTSL 3 BASIC17.85■□□□□ 0.45
USP6P35125 LMO1-201ENST00000335790 1279 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
USP6P35125 AL355500.1-201ENST00000439421 297 ntTSL 3 BASIC17.85■□□□□ 0.45
USP6P35125 SMCO4-202ENST00000525141 889 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
USP6P35125 LMO1-204ENST00000534484 770 ntAPPRIS ALT1 TSL 5 BASIC17.85■□□□□ 0.45
USP6P35125 AC025265.3-201ENST00000550175 468 ntTSL 3 BASIC17.85■□□□□ 0.45
USP6P35125 AC034102.3-201ENST00000551846 300 ntTSL 3 BASIC17.85■□□□□ 0.45
USP6P35125 AC026150.1-201ENST00000562992 701 ntTSL 5 BASIC17.85■□□□□ 0.45
USP6P35125 AC012617.1-202ENST00000586488 509 ntTSL 2 BASIC17.85■□□□□ 0.45
USP6P35125 AC063977.2-201ENST00000601996 421 ntBASIC17.85■□□□□ 0.45
USP6P35125 AC022382.1-201ENST00000602768 336 ntBASIC17.85■□□□□ 0.45
USP6P35125 Metazoa_SRP.152-201ENST00000614413 286 ntBASIC17.85■□□□□ 0.45
USP6P35125 AC112702.1-201ENST00000623712 366 ntBASIC17.85■□□□□ 0.45
USP6P35125 LINC00959-202ENST00000637128 826 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
USP6P35125 AC137936.2-202ENST00000638124 1146 ntTSL 5 BASIC17.85■□□□□ 0.45
USP6P35125 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
USP6P35125 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC17.85■□□□□ 0.45
USP6P35125 SEC22C-205ENST00000417572 1513 ntTSL 3 BASIC17.85■□□□□ 0.45
USP6P35125 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
USP6P35125 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC17.85■□□□□ 0.45
USP6P35125 PPARG-206ENST00000397012 2006 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
USP6P35125 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC17.85■□□□□ 0.45
USP6P35125 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC17.85■□□□□ 0.45
USP6P35125 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
USP6P35125 AXL-203ENST00000593513 2557 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
USP6P35125 RERG-204ENST00000536465 2134 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
USP6P35125 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
USP6P35125 RTN3-210ENST00000540798 3124 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
USP6P35125 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
USP6P35125 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
USP6P35125 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
USP6P35125 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
USP6P35125 SEPT4-223ENST00000583114 1709 ntTSL 2 BASIC17.84■□□□□ 0.45
USP6P35125 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC17.84■□□□□ 0.45
USP6P35125 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
USP6P35125 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
USP6P35125 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
USP6P35125 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
USP6P35125 SLIRP-201ENST00000238688 394 ntAPPRIS P3 TSL 2 BASIC17.84■□□□□ 0.45
USP6P35125 RNA5SP248-201ENST00000365602 127 ntBASIC17.84■□□□□ 0.45
USP6P35125 MKL1-204ENST00000402630 747 ntTSL 2 BASIC17.84■□□□□ 0.45
USP6P35125 POLR3H-204ENST00000407461 802 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
USP6P35125 OR7E37P-201ENST00000421076 897 ntBASIC17.84■□□□□ 0.45
USP6P35125 RN7SL677P-201ENST00000466970 319 ntBASIC17.84■□□□□ 0.45
USP6P35125 RNF7-205ENST00000480908 782 ntTSL 4 BASIC17.84■□□□□ 0.45
USP6P35125 RPL10P8-201ENST00000522888 313 ntBASIC17.84■□□□□ 0.45
USP6P35125 AC010183.1-201ENST00000552413 559 ntTSL 4 BASIC17.84■□□□□ 0.45
USP6P35125 ALOX12P1-201ENST00000579299 1229 ntBASIC17.84■□□□□ 0.45
USP6P35125 AC091691.1-201ENST00000583587 1018 ntBASIC17.84■□□□□ 0.45
USP6P35125 CYP1B1-AS1-204ENST00000589303 579 ntTSL 5 BASIC17.84■□□□□ 0.45
USP6P35125 OR4C3-202ENST00000611380 597 ntBASIC17.84■□□□□ 0.45
USP6P35125 ZNF268-219ENST00000611984 583 ntTSL 5 BASIC17.84■□□□□ 0.45
USP6P35125 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
USP6P35125 TSPY26P-202ENST00000565928 3884 ntBASIC17.84■□□□□ 0.45
USP6P35125 ZNF621-204ENST00000431278 2613 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
USP6P35125 USP8-219ENST00000625664 1568 ntTSL 5 BASIC17.84■□□□□ 0.45
USP6P35125 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
USP6P35125 AZGP1-201ENST00000292401 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
USP6P35125 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
USP6P35125 TUBA3GP-201ENST00000410028 1325 ntBASIC17.84■□□□□ 0.45
USP6P35125 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC17.84■□□□□ 0.45
USP6P35125 PECR-201ENST00000265322 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
USP6P35125 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
USP6P35125 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
USP6P35125 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
USP6P35125 AC023830.3-201ENST00000612995 1455 ntBASIC17.84■□□□□ 0.45
USP6P35125 RUSC1-AS1-202ENST00000446880 1836 ntTSL 2 BASIC17.83■□□□□ 0.45
USP6P35125 IMPDH1P5-201ENST00000439688 1540 ntBASIC17.83■□□□□ 0.45
USP6P35125 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
USP6P35125 RNASE8-201ENST00000308227 634 ntAPPRIS P1 BASIC17.83■□□□□ 0.45
USP6P35125 BNIP1-203ENST00000352523 1143 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
USP6P35125 MT-ND6-201ENST00000361681 525 ntAPPRIS P1 BASIC17.83■□□□□ 0.45
USP6P35125 Metazoa_SRP.8-201ENST00000398067 251 ntBASIC17.83■□□□□ 0.45
USP6P35125 SERPINB8P1-201ENST00000401898 377 ntBASIC17.83■□□□□ 0.45
USP6P35125 FAM138A-201ENST00000417324 1187 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
USP6P35125 AL590399.1-204ENST00000430302 781 ntTSL 5 BASIC17.83■□□□□ 0.45
USP6P35125 AC002066.1-201ENST00000446355 514 ntTSL 5 BASIC17.83■□□□□ 0.45
USP6P35125 FAM138D-201ENST00000504074 1187 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
USP6P35125 FAM138E-201ENST00000507796 1187 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
USP6P35125 PDPN-208ENST00000509009 571 ntTSL 4 BASIC17.83■□□□□ 0.45
USP6P35125 AC079601.2-201ENST00000547729 775 ntBASIC17.83■□□□□ 0.45
USP6P35125 IFI27L1-203ENST00000553664 647 ntTSL 5 BASIC17.83■□□□□ 0.45
USP6P35125 RAB42P1-201ENST00000555078 316 ntBASIC17.83■□□□□ 0.45
USP6P35125 Z93930.2-203ENST00000585003 516 ntBASIC17.83■□□□□ 0.45
USP6P35125 AP005264.6-203ENST00000586882 1050 ntTSL 5 BASIC17.83■□□□□ 0.45
USP6P35125 FXYD3-212ENST00000605550 590 ntTSL 4 BASIC17.83■□□□□ 0.45
USP6P35125 PSME2-217ENST00000615264 874 ntTSL 5 BASIC17.83■□□□□ 0.45
USP6P35125 PSME2-218ENST00000630027 185 ntTSL 3 BASIC17.83■□□□□ 0.45
USP6P35125 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
USP6P35125 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
USP6P35125 ELP2-221ENST00000542824 2288 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
USP6P35125 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC17.83■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 66 ms