Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
CLDN6P56747 GJB1-201ENST00000361726 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CLDN6P56747 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CLDN6P56747 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC13.07□□□□□ -0.32
CLDN6P56747 EXOSC7-201ENST00000265564 1055 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CLDN6P56747 XAGE2-201ENST00000286049 618 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CLDN6P56747 LYPLA2-203ENST00000374503 868 ntTSL 2 BASIC13.07□□□□□ -0.32
CLDN6P56747 FUNDC1-201ENST00000378045 1196 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CLDN6P56747 UCN3-201ENST00000380433 1200 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CLDN6P56747 MIR611-201ENST00000384869 67 ntBASIC13.07□□□□□ -0.32
CLDN6P56747 U73169.1-201ENST00000395152 367 ntBASIC13.07□□□□□ -0.32
CLDN6P56747 OR7E155P-201ENST00000412208 1014 ntBASIC13.07□□□□□ -0.32
CLDN6P56747 CORO1C-203ENST00000421578 1296 ntTSL 2 BASIC13.07□□□□□ -0.32
CLDN6P56747 AC011284.1-201ENST00000427920 856 ntTSL 4 BASIC13.07□□□□□ -0.32
CLDN6P56747 GHRL-206ENST00000430179 856 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CLDN6P56747 AL109924.1-201ENST00000444586 914 ntTSL 3 BASIC13.07□□□□□ -0.32
CLDN6P56747 AC004889.1-201ENST00000498693 856 ntTSL 5 BASIC13.07□□□□□ -0.32
CLDN6P56747 IGHVII-74-1-201ENST00000517572 241 ntBASIC13.07□□□□□ -0.32
CLDN6P56747 AC087442.1-201ENST00000525563 249 ntTSL 2 BASIC13.07□□□□□ -0.32
CLDN6P56747 ACER3-205ENST00000526597 1269 ntTSL 2 BASIC13.07□□□□□ -0.32
CLDN6P56747 C9orf135-205ENST00000527647 748 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CLDN6P56747 PHBP18-201ENST00000546648 813 ntBASIC13.07□□□□□ -0.32
CLDN6P56747 AL512356.1-201ENST00000548203 535 ntTSL 3 BASIC13.07□□□□□ -0.32
CLDN6P56747 IFI27L1-211ENST00000557066 580 ntTSL 3 BASIC13.07□□□□□ -0.32
CLDN6P56747 LINC01836-201ENST00000586061 829 ntTSL 3 BASIC13.07□□□□□ -0.32
CLDN6P56747 LINC02081-201ENST00000586185 877 ntTSL 3 BASIC13.07□□□□□ -0.32
CLDN6P56747 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
CLDN6P56747 IFNL3P1-201ENST00000595082 501 ntBASIC13.07□□□□□ -0.32
CLDN6P56747 IRF3-213ENST00000596765 710 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CLDN6P56747 RAB11B-205ENST00000601897 577 ntTSL 3 BASIC13.07□□□□□ -0.32
CLDN6P56747 SMIM26-203ENST00000608034 670 ntAPPRIS ALT2 TSL 3 BASIC13.07□□□□□ -0.32
CLDN6P56747 AL590556.2-202ENST00000636906 844 ntBASIC13.07□□□□□ -0.32
CLDN6P56747 KRT37-201ENST00000225550 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CLDN6P56747 AC093462.1-201ENST00000621167 1683 ntBASIC13.07□□□□□ -0.32
CLDN6P56747 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CLDN6P56747 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CLDN6P56747 FUK-202ENST00000378912 3925 ntTSL 2 BASIC13.07□□□□□ -0.32
CLDN6P56747 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CLDN6P56747 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CLDN6P56747 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC13.07□□□□□ -0.32
CLDN6P56747 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CLDN6P56747 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC13.07□□□□□ -0.32
CLDN6P56747 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
CLDN6P56747 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CLDN6P56747 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC13.07□□□□□ -0.32
CLDN6P56747 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CLDN6P56747 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC13.07□□□□□ -0.32
CLDN6P56747 KRT8P42-201ENST00000405771 1399 ntBASIC13.07□□□□□ -0.32
CLDN6P56747 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
CLDN6P56747 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC13.07□□□□□ -0.32
CLDN6P56747 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CLDN6P56747 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CLDN6P56747 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CLDN6P56747 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CLDN6P56747 SEC13-209ENST00000397117 1603 ntTSL 5 BASIC13.06□□□□□ -0.32
CLDN6P56747 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CLDN6P56747 ECI2-202ENST00000380118 1407 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CLDN6P56747 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CLDN6P56747 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CLDN6P56747 CATSPERD-202ENST00000381624 2516 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CLDN6P56747 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CLDN6P56747 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC13.06□□□□□ -0.32
CLDN6P56747 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CLDN6P56747 AC040160.2-201ENST00000623816 1675 ntBASIC13.06□□□□□ -0.32
CLDN6P56747 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CLDN6P56747 ABCA17P-202ENST00000469908 4188 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CLDN6P56747 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CLDN6P56747 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
CLDN6P56747 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC13.06□□□□□ -0.32
CLDN6P56747 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC13.06□□□□□ -0.32
CLDN6P56747 AC239809.3-201ENST00000599640 4266 ntTSL 5 BASIC13.06□□□□□ -0.32
CLDN6P56747 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
CLDN6P56747 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC13.06□□□□□ -0.32
CLDN6P56747 HIGD2A-201ENST00000274787 668 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CLDN6P56747 SH3BGR-202ENST00000380631 780 ntTSL 5 BASIC13.06□□□□□ -0.32
CLDN6P56747 ACOT6-201ENST00000381139 1004 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CLDN6P56747 DNM1P46-202ENST00000415963 882 ntBASIC13.06□□□□□ -0.32
CLDN6P56747 RPSAP6-201ENST00000417882 882 ntBASIC13.06□□□□□ -0.32
CLDN6P56747 KCNK15-AS1-202ENST00000427303 528 ntTSL 5 BASIC13.06□□□□□ -0.32
CLDN6P56747 HNF1A-AS1-201ENST00000433033 612 ntTSL 3 BASIC13.06□□□□□ -0.32
CLDN6P56747 HNRNPA3P12-201ENST00000437410 1063 ntBASIC13.06□□□□□ -0.32
CLDN6P56747 AL121656.1-201ENST00000440786 482 ntTSL 5 BASIC13.06□□□□□ -0.32
CLDN6P56747 GYG1-209ENST00000483267 801 ntTSL 2 BASIC13.06□□□□□ -0.32
CLDN6P56747 RN7SL523P-201ENST00000484401 298 ntBASIC13.06□□□□□ -0.32
CLDN6P56747 MARK2P17-201ENST00000498560 841 ntBASIC13.06□□□□□ -0.32
CLDN6P56747 AP003168.2-201ENST00000531215 471 ntTSL 3 BASIC13.06□□□□□ -0.32
CLDN6P56747 AL136295.3-201ENST00000558325 850 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
CLDN6P56747 AC009120.2-205ENST00000561921 490 ntTSL 3 BASIC13.06□□□□□ -0.32
CLDN6P56747 CARHSP1-208ENST00000567554 598 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
CLDN6P56747 AL031710.1-201ENST00000570022 468 ntTSL 2 BASIC13.06□□□□□ -0.32
CLDN6P56747 RN7SL440P-201ENST00000577855 343 ntBASIC13.06□□□□□ -0.32
CLDN6P56747 RN7SL480P-201ENST00000581481 294 ntBASIC13.06□□□□□ -0.32
CLDN6P56747 ACTBP9-201ENST00000587663 1099 ntBASIC13.06□□□□□ -0.32
CLDN6P56747 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
CLDN6P56747 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
CLDN6P56747 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CLDN6P56747 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CLDN6P56747 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CLDN6P56747 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
CLDN6P56747 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms