Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 EFEMP1-201ENST00000355426 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CCDC50Q8IVM0 AC010970.1-201ENST00000445125 1848 ntBASIC14.55□□□□□ -0.08
CCDC50Q8IVM0 AC002350.2-201ENST00000623894 1828 ntBASIC14.55□□□□□ -0.08
CCDC50Q8IVM0 ELP4-203ENST00000395934 1961 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CCDC50Q8IVM0 EPN2-202ENST00000347697 4664 ntAPPRIS ALT1 TSL 5 BASIC14.54□□□□□ -0.08
CCDC50Q8IVM0 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CCDC50Q8IVM0 EPM2A-218ENST00000639465 2203 ntTSL 5 BASIC14.54□□□□□ -0.08
CCDC50Q8IVM0 ARAF-203ENST00000377045 2458 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
CCDC50Q8IVM0 SLC16A2-201ENST00000587091 4161 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CCDC50Q8IVM0 AC011700.1-201ENST00000610409 2627 ntBASIC14.54□□□□□ -0.08
CCDC50Q8IVM0 ITGA5-201ENST00000293379 4444 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CCDC50Q8IVM0 PML-210ENST00000563500 4502 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CCDC50Q8IVM0 MYCBP-201ENST00000397572 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CCDC50Q8IVM0 MPP2-219ENST00000612133 4938 ntTSL 5 BASIC14.54□□□□□ -0.08
CCDC50Q8IVM0 STXBP5L-201ENST00000273666 9496 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
CCDC50Q8IVM0 ADAM19-203ENST00000517905 3312 ntTSL 5 BASIC14.54□□□□□ -0.08
CCDC50Q8IVM0 SLC4A7-203ENST00000425128 7970 ntTSL 5 BASIC14.54□□□□□ -0.08
CCDC50Q8IVM0 HNRNPA1P41-201ENST00000397777 928 ntBASIC14.54□□□□□ -0.08
CCDC50Q8IVM0 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CCDC50Q8IVM0 BX679664.3-201ENST00000414070 555 ntBASIC14.54□□□□□ -0.08
CCDC50Q8IVM0 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC14.54□□□□□ -0.08
CCDC50Q8IVM0 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC14.54□□□□□ -0.08
CCDC50Q8IVM0 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC14.54□□□□□ -0.08
CCDC50Q8IVM0 AC113935.1-201ENST00000471722 555 ntBASIC14.54□□□□□ -0.08
CCDC50Q8IVM0 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC14.54□□□□□ -0.08
CCDC50Q8IVM0 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC14.54□□□□□ -0.08
CCDC50Q8IVM0 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC14.54□□□□□ -0.08
CCDC50Q8IVM0 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC14.54□□□□□ -0.08
CCDC50Q8IVM0 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CCDC50Q8IVM0 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC14.54□□□□□ -0.08
CCDC50Q8IVM0 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
CCDC50Q8IVM0 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CCDC50Q8IVM0 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
CCDC50Q8IVM0 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC14.54□□□□□ -0.08
CCDC50Q8IVM0 MST1R-201ENST00000296474 4536 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
CCDC50Q8IVM0 CSF3-204ENST00000394149 1583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CCDC50Q8IVM0 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CCDC50Q8IVM0 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC14.54□□□□□ -0.08
CCDC50Q8IVM0 AJAP1-202ENST00000378191 11666 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CCDC50Q8IVM0 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC14.54□□□□□ -0.08
CCDC50Q8IVM0 SLC7A8-205ENST00000453702 1752 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CCDC50Q8IVM0 ST8SIA1-203ENST00000396037 9714 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CCDC50Q8IVM0 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC14.54□□□□□ -0.08
CCDC50Q8IVM0 AC060814.4-201ENST00000594169 2163 ntBASIC14.54□□□□□ -0.08
CCDC50Q8IVM0 LINC01679-201ENST00000442815 2798 ntTSL 3 BASIC14.54□□□□□ -0.08
CCDC50Q8IVM0 MEP1A-201ENST00000230588 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CCDC50Q8IVM0 PLA2G6-202ENST00000335539 3060 ntTSL 5 BASIC14.54□□□□□ -0.08
CCDC50Q8IVM0 TBC1D22B-201ENST00000373491 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CCDC50Q8IVM0 CACNB1-202ENST00000394303 3742 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
CCDC50Q8IVM0 SLC35F1-201ENST00000360388 4852 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CCDC50Q8IVM0 VSTM4-202ENST00000332853 6392 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CCDC50Q8IVM0 RALGPS1-201ENST00000259351 6336 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CCDC50Q8IVM0 FAM118A-201ENST00000216214 3458 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
CCDC50Q8IVM0 RBM10-201ENST00000329236 3201 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CCDC50Q8IVM0 TMEM233-201ENST00000426426 3081 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
CCDC50Q8IVM0 FGGY-201ENST00000303721 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CCDC50Q8IVM0 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC14.53□□□□□ -0.08
CCDC50Q8IVM0 RDH12-203ENST00000551171 1879 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CCDC50Q8IVM0 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CCDC50Q8IVM0 SVOPL-203ENST00000421622 1653 ntTSL 5 BASIC14.53□□□□□ -0.08
CCDC50Q8IVM0 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CCDC50Q8IVM0 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC14.53□□□□□ -0.08
CCDC50Q8IVM0 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC14.53□□□□□ -0.08
CCDC50Q8IVM0 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC14.53□□□□□ -0.08
CCDC50Q8IVM0 ARHGAP33-204ENST00000378944 4219 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
CCDC50Q8IVM0 OR8S1-201ENST00000310194 1080 ntBASIC14.53□□□□□ -0.08
CCDC50Q8IVM0 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC14.53□□□□□ -0.08
CCDC50Q8IVM0 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CCDC50Q8IVM0 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CCDC50Q8IVM0 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
CCDC50Q8IVM0 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CCDC50Q8IVM0 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC14.53□□□□□ -0.08
CCDC50Q8IVM0 FLJ37035-201ENST00000419400 446 ntTSL 3 BASIC14.53□□□□□ -0.08
CCDC50Q8IVM0 HNRNPA1P2-207ENST00000432375 960 ntBASIC14.53□□□□□ -0.08
CCDC50Q8IVM0 AC104306.2-201ENST00000451877 341 ntBASIC14.53□□□□□ -0.08
CCDC50Q8IVM0 AC125604.1-201ENST00000496255 707 ntBASIC14.53□□□□□ -0.08
CCDC50Q8IVM0 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC14.53□□□□□ -0.08
CCDC50Q8IVM0 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CCDC50Q8IVM0 LINC02369-202ENST00000540745 801 ntTSL 5 BASIC14.53□□□□□ -0.08
CCDC50Q8IVM0 KRT8P1-201ENST00000557533 1207 ntBASIC14.53□□□□□ -0.08
CCDC50Q8IVM0 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC14.53□□□□□ -0.08
CCDC50Q8IVM0 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC14.53□□□□□ -0.08
CCDC50Q8IVM0 ELP5-212ENST00000574255 671 ntTSL 2 BASIC14.53□□□□□ -0.08
CCDC50Q8IVM0 NAT9-222ENST00000583476 583 ntTSL 3 BASIC14.53□□□□□ -0.08
CCDC50Q8IVM0 NKG7-204ENST00000595217 816 ntTSL 2 BASIC14.53□□□□□ -0.08
CCDC50Q8IVM0 AL021707.6-201ENST00000609212 491 ntBASIC14.53□□□□□ -0.08
CCDC50Q8IVM0 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC14.53□□□□□ -0.08
CCDC50Q8IVM0 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CCDC50Q8IVM0 AC079336.7-201ENST00000623428 1078 ntBASIC14.53□□□□□ -0.08
CCDC50Q8IVM0 KLHL7-202ENST00000339077 5620 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CCDC50Q8IVM0 WDR73-202ENST00000434634 5387 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CCDC50Q8IVM0 ZNF384-204ENST00000396801 3008 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
CCDC50Q8IVM0 SCAF4-201ENST00000286835 4193 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
CCDC50Q8IVM0 ZNF410-201ENST00000324593 2293 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CCDC50Q8IVM0 APLP2-201ENST00000263574 3727 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
CCDC50Q8IVM0 PIP5K1A-204ENST00000409426 3737 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
CCDC50Q8IVM0 EIF3A-201ENST00000369144 6646 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CCDC50Q8IVM0 MAN2C1-242ENST00000569482 3177 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CCDC50Q8IVM0 AKAP13-201ENST00000361243 9468 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.08
CCDC50Q8IVM0 SLC1A2-208ENST00000606205 1890 ntTSL 2 BASIC14.52□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 58.4 ms