Protein–RNA interactions for Protein: Q0VF96

CGNL1, Cingulin-like protein 1, humanhuman

Predictions only

Length 1,302 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGNL1Q0VF96 ACTBP7-201ENST00000418351 1124 ntBASIC18.39■□□□□ 0.53
CGNL1Q0VF96 AL365436.2-201ENST00000434112 526 ntTSL 4 BASIC18.39■□□□□ 0.53
CGNL1Q0VF96 AL035413.1-201ENST00000437898 507 ntTSL 2 BASIC18.39■□□□□ 0.53
CGNL1Q0VF96 AL021391.1-201ENST00000454439 545 ntTSL 4 BASIC18.39■□□□□ 0.53
CGNL1Q0VF96 RNF216P1-212ENST00000493407 659 ntTSL 3 BASIC18.39■□□□□ 0.53
CGNL1Q0VF96 SRPK2P-201ENST00000523408 1100 ntBASIC18.39■□□□□ 0.53
CGNL1Q0VF96 AIPL1-210ENST00000576307 1077 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CGNL1Q0VF96 RN7SL162P-201ENST00000579233 292 ntBASIC18.39■□□□□ 0.53
CGNL1Q0VF96 KF455155.1-201ENST00000604493 303 ntBASIC18.39■□□□□ 0.53
CGNL1Q0VF96 AP000553.2-201ENST00000609038 441 ntBASIC18.39■□□□□ 0.53
CGNL1Q0VF96 PDCD6-213ENST00000618970 931 ntTSL 3 BASIC18.39■□□□□ 0.53
CGNL1Q0VF96 AC139713.2-207ENST00000641556 1292 ntBASIC18.39■□□□□ 0.53
CGNL1Q0VF96 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CGNL1Q0VF96 AC009093.1-201ENST00000566070 2099 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CGNL1Q0VF96 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CGNL1Q0VF96 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CGNL1Q0VF96 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC18.39■□□□□ 0.53
CGNL1Q0VF96 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
CGNL1Q0VF96 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CGNL1Q0VF96 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC18.39■□□□□ 0.53
CGNL1Q0VF96 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
CGNL1Q0VF96 CATSPERE-203ENST00000366534 3333 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
CGNL1Q0VF96 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CGNL1Q0VF96 AMHR2-204ENST00000550311 1787 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CGNL1Q0VF96 GDAP2-201ENST00000369442 2436 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CGNL1Q0VF96 LINC00943-204ENST00000537374 1688 ntTSL 5 BASIC18.39■□□□□ 0.53
CGNL1Q0VF96 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC18.38■□□□□ 0.53
CGNL1Q0VF96 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC18.38■□□□□ 0.53
CGNL1Q0VF96 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CGNL1Q0VF96 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
CGNL1Q0VF96 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
CGNL1Q0VF96 HNRNPL-210ENST00000600873 1633 ntTSL 5 BASIC18.38■□□□□ 0.53
CGNL1Q0VF96 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CGNL1Q0VF96 LINC02226-201ENST00000501071 1587 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CGNL1Q0VF96 TGM1-202ENST00000544573 1581 ntTSL 2 BASIC18.38■□□□□ 0.53
CGNL1Q0VF96 SLC4A11-207ENST00000539553 2832 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
CGNL1Q0VF96 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CGNL1Q0VF96 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
CGNL1Q0VF96 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC18.38■□□□□ 0.53
CGNL1Q0VF96 UBTF-209ENST00000529383 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CGNL1Q0VF96 ZNF570-202ENST00000586475 1985 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CGNL1Q0VF96 EZH2-202ENST00000350995 2477 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CGNL1Q0VF96 ZNF384-204ENST00000396801 3008 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
CGNL1Q0VF96 MED7-202ENST00000420343 1382 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
CGNL1Q0VF96 LINC01285-204ENST00000634601 1947 ntTSL 5 BASIC18.38■□□□□ 0.53
CGNL1Q0VF96 POM121L4P-202ENST00000427789 1891 ntBASIC18.38■□□□□ 0.53
CGNL1Q0VF96 HIST1H1D-201ENST00000244534 666 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
CGNL1Q0VF96 ZNF226-201ENST00000300823 817 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CGNL1Q0VF96 KRTAP4-12-201ENST00000394014 1077 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
CGNL1Q0VF96 GH2-203ENST00000449787 753 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CGNL1Q0VF96 VEGFA-219ENST00000518824 606 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CGNL1Q0VF96 PAX5-210ENST00000520281 969 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CGNL1Q0VF96 AC145422.1-201ENST00000541574 544 ntTSL 3 BASIC18.38■□□□□ 0.53
CGNL1Q0VF96 FAM90A28P-201ENST00000596881 489 ntTSL 5 BASIC18.38■□□□□ 0.53
CGNL1Q0VF96 HSD3B2-206ENST00000543831 1783 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
CGNL1Q0VF96 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC18.38■□□□□ 0.53
CGNL1Q0VF96 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CGNL1Q0VF96 PRMT5-202ENST00000324366 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CGNL1Q0VF96 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
CGNL1Q0VF96 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC18.38■□□□□ 0.53
CGNL1Q0VF96 ELAVL4-207ENST00000448907 1951 ntTSL 2 BASIC18.38■□□□□ 0.53
CGNL1Q0VF96 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
CGNL1Q0VF96 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC18.38■□□□□ 0.53
CGNL1Q0VF96 ERAL1-201ENST00000254928 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CGNL1Q0VF96 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
CGNL1Q0VF96 ZSCAN21-203ENST00000456748 1904 ntTSL 5 BASIC18.37■□□□□ 0.53
CGNL1Q0VF96 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
CGNL1Q0VF96 C16orf82-201ENST00000418886 2268 ntAPPRIS ALT2 BASIC18.37■□□□□ 0.53
CGNL1Q0VF96 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC18.37■□□□□ 0.53
CGNL1Q0VF96 DYRK4-201ENST00000010132 1840 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
CGNL1Q0VF96 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC18.37■□□□□ 0.53
CGNL1Q0VF96 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CGNL1Q0VF96 MSNP1-201ENST00000511640 1732 ntBASIC18.37■□□□□ 0.53
CGNL1Q0VF96 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CGNL1Q0VF96 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC18.37■□□□□ 0.53
CGNL1Q0VF96 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
CGNL1Q0VF96 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
CGNL1Q0VF96 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CGNL1Q0VF96 FMC1-201ENST00000297534 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CGNL1Q0VF96 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
CGNL1Q0VF96 ATP5S-203ENST00000358473 801 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CGNL1Q0VF96 TUBB2BP1-201ENST00000404155 871 ntBASIC18.37■□□□□ 0.53
CGNL1Q0VF96 AL513165.1-201ENST00000413915 289 ntTSL 3 BASIC18.37■□□□□ 0.53
CGNL1Q0VF96 GRP-202ENST00000420468 579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CGNL1Q0VF96 AC093609.1-201ENST00000434020 952 ntTSL 2 BASIC18.37■□□□□ 0.53
CGNL1Q0VF96 LINC00313-207ENST00000451543 413 ntTSL 3 BASIC18.37■□□□□ 0.53
CGNL1Q0VF96 OAZ3-203ENST00000453029 729 ntTSL 5 BASIC18.37■□□□□ 0.53
CGNL1Q0VF96 MTHFD2P7-201ENST00000483867 983 ntBASIC18.37■□□□□ 0.53
CGNL1Q0VF96 CALCA-205ENST00000486207 851 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
CGNL1Q0VF96 ORAOV1-205ENST00000535657 709 ntAPPRIS P2 TSL 3 BASIC18.37■□□□□ 0.53
CGNL1Q0VF96 AC015712.5-201ENST00000558568 564 ntTSL 2 BASIC18.37■□□□□ 0.53
CGNL1Q0VF96 CARHSP1-208ENST00000567554 598 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
CGNL1Q0VF96 AC010127.1-202ENST00000597623 713 ntTSL 2 BASIC18.37■□□□□ 0.53
CGNL1Q0VF96 LINC01669-201ENST00000623161 413 ntTSL 3 BASIC18.37■□□□□ 0.53
CGNL1Q0VF96 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CGNL1Q0VF96 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CGNL1Q0VF96 DHX16-201ENST00000376437 1933 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CGNL1Q0VF96 PLAT-203ENST00000429089 2599 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
CGNL1Q0VF96 HNRNPLP1-201ENST00000421896 1501 ntBASIC18.37■□□□□ 0.53
CGNL1Q0VF96 MKL1-212ENST00000618417 1842 ntTSL 5 BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms