Protein–RNA interactions for Protein: Q96DB2

HDAC11, Histone deacetylase 11, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11Q96DB2 ZNF426-204ENST00000593003 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
HDAC11Q96DB2 ZC3H18-201ENST00000301011 3729 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
HDAC11Q96DB2 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
HDAC11Q96DB2 NCF2-201ENST00000367535 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HDAC11Q96DB2 RRAGA-201ENST00000380527 1589 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
HDAC11Q96DB2 AC005562.1-201ENST00000583030 3219 ntBASIC14.14□□□□□ -0.15
HDAC11Q96DB2 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
HDAC11Q96DB2 CDIP1-201ENST00000399599 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HDAC11Q96DB2 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC14.14□□□□□ -0.15
HDAC11Q96DB2 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HDAC11Q96DB2 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
HDAC11Q96DB2 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
HDAC11Q96DB2 KRTAP2-2-201ENST00000398477 733 ntAPPRIS P2 BASIC14.14□□□□□ -0.15
HDAC11Q96DB2 RANGRF-202ENST00000407006 1074 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
HDAC11Q96DB2 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC14.14□□□□□ -0.15
HDAC11Q96DB2 BCYRN1-201ENST00000418539 200 ntBASIC14.14□□□□□ -0.15
HDAC11Q96DB2 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC14.14□□□□□ -0.15
HDAC11Q96DB2 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC14.14□□□□□ -0.15
HDAC11Q96DB2 IGHJ2P-201ENST00000454480 60 ntBASIC14.14□□□□□ -0.15
HDAC11Q96DB2 EGFR-207ENST00000455089 3844 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
HDAC11Q96DB2 RN7SL720P-201ENST00000488178 304 ntBASIC14.14□□□□□ -0.15
HDAC11Q96DB2 AC093627.2-201ENST00000497017 568 ntTSL 4 BASIC14.14□□□□□ -0.15
HDAC11Q96DB2 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC14.14□□□□□ -0.15
HDAC11Q96DB2 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC14.14□□□□□ -0.15
HDAC11Q96DB2 C12orf73-210ENST00000552940 685 ntTSL 2 BASIC14.14□□□□□ -0.15
HDAC11Q96DB2 AC091769.1-201ENST00000619576 568 ntBASIC14.14□□□□□ -0.15
HDAC11Q96DB2 SMIM11B-202ENST00000619874 843 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HDAC11Q96DB2 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC14.14□□□□□ -0.15
HDAC11Q96DB2 SYNPR-209ENST00000478300 2709 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
HDAC11Q96DB2 MAP4K2-201ENST00000294066 7178 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HDAC11Q96DB2 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
HDAC11Q96DB2 CSNK1E-201ENST00000359867 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HDAC11Q96DB2 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HDAC11Q96DB2 CD34-203ENST00000367036 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
HDAC11Q96DB2 ANTXR2-203ENST00000403729 8273 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HDAC11Q96DB2 DFFA-202ENST00000377038 6032 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HDAC11Q96DB2 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC14.14□□□□□ -0.15
HDAC11Q96DB2 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC14.14□□□□□ -0.15
HDAC11Q96DB2 PNKD-203ENST00000273077 3021 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
HDAC11Q96DB2 MPRIP-202ENST00000341712 3846 ntAPPRIS P3 TSL 5 BASIC14.14□□□□□ -0.15
HDAC11Q96DB2 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC14.14□□□□□ -0.15
HDAC11Q96DB2 SDR9C7-201ENST00000293502 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HDAC11Q96DB2 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HDAC11Q96DB2 RFX8-201ENST00000428343 1686 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
HDAC11Q96DB2 ASB15-207ENST00000540573 1651 ntTSL 2 BASIC14.14□□□□□ -0.15
HDAC11Q96DB2 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HDAC11Q96DB2 ERG-211ENST00000453032 1595 ntTSL 2 BASIC14.13□□□□□ -0.15
HDAC11Q96DB2 RHPN1-AS1-201ENST00000518049 1918 ntBASIC14.13□□□□□ -0.15
HDAC11Q96DB2 SLC4A1-201ENST00000262418 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HDAC11Q96DB2 TSPAN31-201ENST00000257910 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HDAC11Q96DB2 AC007666.1-201ENST00000443935 1838 ntTSL 5 BASIC14.13□□□□□ -0.15
HDAC11Q96DB2 NIT1-202ENST00000368008 2081 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
HDAC11Q96DB2 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC14.13□□□□□ -0.15
HDAC11Q96DB2 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC14.13□□□□□ -0.15
HDAC11Q96DB2 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
HDAC11Q96DB2 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HDAC11Q96DB2 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
HDAC11Q96DB2 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC14.13□□□□□ -0.15
HDAC11Q96DB2 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC14.13□□□□□ -0.15
HDAC11Q96DB2 OR2V1-201ENST00000329365 948 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
HDAC11Q96DB2 GLRX3-202ENST00000368644 3827 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
HDAC11Q96DB2 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HDAC11Q96DB2 DKKL1P1-201ENST00000400550 698 ntBASIC14.13□□□□□ -0.15
HDAC11Q96DB2 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC14.13□□□□□ -0.15
HDAC11Q96DB2 AL592076.1-201ENST00000424448 303 ntBASIC14.13□□□□□ -0.15
HDAC11Q96DB2 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
HDAC11Q96DB2 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC14.13□□□□□ -0.15
HDAC11Q96DB2 ERP29P1-201ENST00000442902 706 ntBASIC14.13□□□□□ -0.15
HDAC11Q96DB2 AC234782.1-201ENST00000451950 919 ntBASIC14.13□□□□□ -0.15
HDAC11Q96DB2 AC084030.1-201ENST00000455068 561 ntTSL 4 BASIC14.13□□□□□ -0.15
HDAC11Q96DB2 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC14.13□□□□□ -0.15
HDAC11Q96DB2 RMDN1-218ENST00000523911 950 ntTSL 2 BASIC14.13□□□□□ -0.15
HDAC11Q96DB2 AC138701.2-201ENST00000553634 226 ntBASIC14.13□□□□□ -0.15
HDAC11Q96DB2 C14orf132-201ENST00000553764 562 ntTSL 4 BASIC14.13□□□□□ -0.15
HDAC11Q96DB2 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC14.13□□□□□ -0.15
HDAC11Q96DB2 MIR4522-201ENST00000584932 87 ntBASIC14.13□□□□□ -0.15
HDAC11Q96DB2 ATF7-212ENST00000591397 860 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
HDAC11Q96DB2 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC14.13□□□□□ -0.15
HDAC11Q96DB2 LRRFIP1-202ENST00000289175 3709 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
HDAC11Q96DB2 AJAP1-202ENST00000378191 11666 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HDAC11Q96DB2 LPCAT1-201ENST00000283415 3966 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HDAC11Q96DB2 ABCA3-202ENST00000382381 6446 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
HDAC11Q96DB2 ETNPPL-202ENST00000411864 2028 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HDAC11Q96DB2 SLC7A7-201ENST00000285850 2263 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
HDAC11Q96DB2 CALB1-201ENST00000265431 2533 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HDAC11Q96DB2 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC14.13□□□□□ -0.15
HDAC11Q96DB2 ARAP1-204ENST00000393609 5145 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
HDAC11Q96DB2 PHKG1-201ENST00000297373 1431 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
HDAC11Q96DB2 DLGAP1-203ENST00000400147 5258 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
HDAC11Q96DB2 DLGAP1-206ENST00000400155 5257 ntTSL 2 BASIC14.13□□□□□ -0.15
HDAC11Q96DB2 GATAD2A-203ENST00000404158 5776 ntAPPRIS ALT1 TSL 2 BASIC14.13□□□□□ -0.15
HDAC11Q96DB2 RECQL5-218ENST00000584999 1922 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
HDAC11Q96DB2 AC019294.4-201ENST00000561777 2905 ntBASIC14.13□□□□□ -0.15
HDAC11Q96DB2 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
HDAC11Q96DB2 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
HDAC11Q96DB2 MAP7-201ENST00000354570 4152 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
HDAC11Q96DB2 TRAK1-210ENST00000613405 4672 ntTSL 2 BASIC14.13□□□□□ -0.15
HDAC11Q96DB2 ZNF286B-205ENST00000545289 5328 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
HDAC11Q96DB2 RREB1-210ENST00000611109 3563 ntTSL 5 BASIC14.13□□□□□ -0.15
HDAC11Q96DB2 PEG10-205ENST00000612748 2585 ntAPPRIS P5 TSL 5 BASIC14.13□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms