Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 LINC02176-201ENST00000569104 598 ntTSL 4 BASIC13.91□□□□□ -0.18
SHROOM3Q8TF72 AC103808.3-201ENST00000579714 598 ntTSL 5 BASIC13.91□□□□□ -0.18
SHROOM3Q8TF72 MIR4472-1-201ENST00000584349 80 ntBASIC13.91□□□□□ -0.18
SHROOM3Q8TF72 HKR1-225ENST00000592168 566 ntTSL 4 BASIC13.91□□□□□ -0.18
SHROOM3Q8TF72 MFSD12-215ENST00000615613 688 ntBASIC13.91□□□□□ -0.18
SHROOM3Q8TF72 Z82244.1-201ENST00000631502 840 ntBASIC13.91□□□□□ -0.18
SHROOM3Q8TF72 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SHROOM3Q8TF72 NRROS-201ENST00000328557 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SHROOM3Q8TF72 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SHROOM3Q8TF72 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SHROOM3Q8TF72 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
SHROOM3Q8TF72 ITGB2-205ENST00000397850 3178 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
SHROOM3Q8TF72 AC007431.1-201ENST00000578662 1412 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SHROOM3Q8TF72 KIR3DL1-203ENST00000391728 1871 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
SHROOM3Q8TF72 KLK4-201ENST00000324041 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SHROOM3Q8TF72 BCCIP-202ENST00000299130 2337 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SHROOM3Q8TF72 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SHROOM3Q8TF72 NIPA1-207ENST00000561183 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
SHROOM3Q8TF72 MUC20-203ENST00000436408 2463 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
SHROOM3Q8TF72 BCAS3-221ENST00000588874 2948 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
SHROOM3Q8TF72 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC13.9□□□□□ -0.18
SHROOM3Q8TF72 SLC25A19-205ENST00000442286 1496 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
SHROOM3Q8TF72 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SHROOM3Q8TF72 C1S-202ENST00000360817 2635 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SHROOM3Q8TF72 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SHROOM3Q8TF72 LINC02537-201ENST00000635943 1367 ntTSL 4 BASIC13.9□□□□□ -0.18
SHROOM3Q8TF72 PGAM2-201ENST00000297283 857 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SHROOM3Q8TF72 SH3BGRL3-202ENST00000319041 768 ntTSL 2 BASIC13.9□□□□□ -0.18
SHROOM3Q8TF72 PDCD5-202ENST00000379316 154 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SHROOM3Q8TF72 CXorf40A-205ENST00000423540 1208 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
SHROOM3Q8TF72 AL606748.1-201ENST00000423919 655 ntTSL 3 BASIC13.9□□□□□ -0.18
SHROOM3Q8TF72 LINC00866-201ENST00000427379 418 ntTSL 2 BASIC13.9□□□□□ -0.18
SHROOM3Q8TF72 AC092638.2-201ENST00000441105 947 ntBASIC13.9□□□□□ -0.18
SHROOM3Q8TF72 CSNK1G2P1-201ENST00000442675 955 ntBASIC13.9□□□□□ -0.18
SHROOM3Q8TF72 RNA5SP406-201ENST00000516106 112 ntBASIC13.9□□□□□ -0.18
SHROOM3Q8TF72 AC134312.2-201ENST00000563521 608 ntTSL 2 BASIC13.9□□□□□ -0.18
SHROOM3Q8TF72 PDCD5-208ENST00000592786 468 ntTSL 3 BASIC13.9□□□□□ -0.18
SHROOM3Q8TF72 RPL13A-213ENST00000621674 1098 ntTSL 5 BASIC13.9□□□□□ -0.18
SHROOM3Q8TF72 KRT33B-201ENST00000251646 1607 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SHROOM3Q8TF72 TUBA1B-202ENST00000336023 1627 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SHROOM3Q8TF72 CDK20-209ENST00000605159 1860 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SHROOM3Q8TF72 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
SHROOM3Q8TF72 SLC7A9-201ENST00000023064 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SHROOM3Q8TF72 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SHROOM3Q8TF72 BCKDHB-201ENST00000320393 3692 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
SHROOM3Q8TF72 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.19
SHROOM3Q8TF72 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC13.9□□□□□ -0.19
SHROOM3Q8TF72 SLC5A9-210ENST00000533824 2219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
SHROOM3Q8TF72 TEX35-204ENST00000367642 2452 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
SHROOM3Q8TF72 C16orf62-215ENST00000542263 3138 ntTSL 2 BASIC13.89□□□□□ -0.19
SHROOM3Q8TF72 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
SHROOM3Q8TF72 LINC01744-201ENST00000457698 2042 ntTSL 2 BASIC13.89□□□□□ -0.19
SHROOM3Q8TF72 JPT1-202ENST00000356033 1519 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SHROOM3Q8TF72 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC13.89□□□□□ -0.19
SHROOM3Q8TF72 NHP2-202ENST00000314397 599 ntTSL 2 BASIC13.89□□□□□ -0.19
SHROOM3Q8TF72 SNU13-204ENST00000402458 462 ntTSL 3 BASIC13.89□□□□□ -0.19
SHROOM3Q8TF72 ID2-AS1-201ENST00000412712 953 ntTSL 5 BASIC13.89□□□□□ -0.19
SHROOM3Q8TF72 MPC1L-201ENST00000423387 571 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
SHROOM3Q8TF72 AC019118.2-201ENST00000425776 718 ntTSL 5 BASIC13.89□□□□□ -0.19
SHROOM3Q8TF72 SUMF2-210ENST00000437307 947 ntTSL 2 BASIC13.89□□□□□ -0.19
SHROOM3Q8TF72 AL512288.1-201ENST00000448015 491 ntTSL 5 BASIC13.89□□□□□ -0.19
SHROOM3Q8TF72 AC004889.1-205ENST00000493248 531 ntTSL 4 BASIC13.89□□□□□ -0.19
SHROOM3Q8TF72 OR2A1-AS1-210ENST00000496968 531 ntBASIC13.89□□□□□ -0.19
SHROOM3Q8TF72 AC022858.1-202ENST00000521084 393 ntTSL 3 BASIC13.89□□□□□ -0.19
SHROOM3Q8TF72 AC010422.5-201ENST00000597961 585 ntAPPRIS P1 TSL 4 BASIC13.89□□□□□ -0.19
SHROOM3Q8TF72 AL135936.1-201ENST00000617956 998 ntTSL 5 BASIC13.89□□□□□ -0.19
SHROOM3Q8TF72 MIR6858-201ENST00000620733 67 ntBASIC13.89□□□□□ -0.19
SHROOM3Q8TF72 AC027559.1-203ENST00000635726 517 ntTSL 5 BASIC13.89□□□□□ -0.19
SHROOM3Q8TF72 AC079325.2-201ENST00000641710 606 ntAPPRIS P5 BASIC13.89□□□□□ -0.19
SHROOM3Q8TF72 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
SHROOM3Q8TF72 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
SHROOM3Q8TF72 FBLIM1-203ENST00000375771 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SHROOM3Q8TF72 Z84468.1-201ENST00000626321 1408 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SHROOM3Q8TF72 LINC01257-201ENST00000376678 2473 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SHROOM3Q8TF72 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SHROOM3Q8TF72 LINC00567-201ENST00000569854 3409 ntBASIC13.89□□□□□ -0.19
SHROOM3Q8TF72 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
SHROOM3Q8TF72 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC13.89□□□□□ -0.19
SHROOM3Q8TF72 SERPING1-202ENST00000340687 1719 ntTSL 5 BASIC13.89□□□□□ -0.19
SHROOM3Q8TF72 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SHROOM3Q8TF72 JUN-201ENST00000371222 3540 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
SHROOM3Q8TF72 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
SHROOM3Q8TF72 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
SHROOM3Q8TF72 DMBX1-201ENST00000360032 2880 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
SHROOM3Q8TF72 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SHROOM3Q8TF72 CENPL-202ENST00000356198 2357 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SHROOM3Q8TF72 ABLIM2-215ENST00000545242 1972 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
SHROOM3Q8TF72 ZNF595-203ENST00000608255 1999 ntTSL 2 BASIC13.89□□□□□ -0.19
SHROOM3Q8TF72 LY86-201ENST00000230568 559 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SHROOM3Q8TF72 AURKB-201ENST00000316199 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SHROOM3Q8TF72 DERL3-202ENST00000318109 860 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
SHROOM3Q8TF72 COX20P1-201ENST00000366529 357 ntBASIC13.89□□□□□ -0.19
SHROOM3Q8TF72 RGR-203ENST00000372092 868 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SHROOM3Q8TF72 TRPM2-AS-201ENST00000423310 586 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SHROOM3Q8TF72 AL353658.1-201ENST00000436263 789 ntTSL 2 BASIC13.89□□□□□ -0.19
SHROOM3Q8TF72 AC068057.1-201ENST00000453322 709 ntTSL 2 BASIC13.89□□□□□ -0.19
SHROOM3Q8TF72 RPL29P2-202ENST00000498671 657 ntBASIC13.89□□□□□ -0.19
SHROOM3Q8TF72 RPS23-204ENST00000507980 836 ntTSL 2 BASIC13.89□□□□□ -0.19
SHROOM3Q8TF72 AC012213.1-201ENST00000517376 722 ntTSL 3 BASIC13.89□□□□□ -0.19
SHROOM3Q8TF72 AP000911.2-201ENST00000534330 502 ntBASIC13.89□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 87.1 ms