Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 AC095040.1-201ENST00000513286 675 ntBASIC14.35□□□□□ -0.11
SLC1A1P43005 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC14.35□□□□□ -0.11
SLC1A1P43005 AL161670.2-201ENST00000557650 1227 ntBASIC14.35□□□□□ -0.11
SLC1A1P43005 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC14.35□□□□□ -0.11
SLC1A1P43005 STUB1-204ENST00000564370 875 ntTSL 2 BASIC14.35□□□□□ -0.11
SLC1A1P43005 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC14.35□□□□□ -0.11
SLC1A1P43005 AC026803.1-201ENST00000569130 274 ntBASIC14.35□□□□□ -0.11
SLC1A1P43005 AC132812.1-201ENST00000583145 892 ntBASIC14.35□□□□□ -0.11
SLC1A1P43005 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
SLC1A1P43005 AC079325.2-201ENST00000641710 606 ntAPPRIS P5 BASIC14.35□□□□□ -0.11
SLC1A1P43005 MYO9A-202ENST00000424560 4008 ntTSL 5 BASIC14.35□□□□□ -0.11
SLC1A1P43005 TMEM182-202ENST00000409528 3112 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SLC1A1P43005 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SLC1A1P43005 RGS22-201ENST00000360863 4296 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
SLC1A1P43005 RFX8-201ENST00000428343 1686 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
SLC1A1P43005 DRD2-208ENST00000542968 2467 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
SLC1A1P43005 SMARCA2-254ENST00000636903 2471 ntTSL 5 BASIC14.35□□□□□ -0.11
SLC1A1P43005 DRD3-201ENST00000295881 1541 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
SLC1A1P43005 GLIPR1L2-201ENST00000320460 1729 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
SLC1A1P43005 TREH-202ENST00000397925 1718 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SLC1A1P43005 PHF21B-201ENST00000313237 3671 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SLC1A1P43005 DPP8-201ENST00000300141 3139 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SLC1A1P43005 C16orf62-215ENST00000542263 3138 ntTSL 2 BASIC14.35□□□□□ -0.11
SLC1A1P43005 ZCCHC8-207ENST00000543897 5663 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SLC1A1P43005 MMP14-201ENST00000311852 3732 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SLC1A1P43005 AC005154.3-201ENST00000419639 1393 ntBASIC14.34□□□□□ -0.11
SLC1A1P43005 TYK2-205ENST00000525621 4347 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SLC1A1P43005 MEST-206ENST00000416162 2158 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SLC1A1P43005 PXK-210ENST00000479241 2817 ntTSL 2 BASIC14.34□□□□□ -0.11
SLC1A1P43005 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC14.34□□□□□ -0.11
SLC1A1P43005 PTPRVP-205ENST00000641549 5067 ntBASIC14.34□□□□□ -0.11
SLC1A1P43005 SEC13-202ENST00000350697 1425 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
SLC1A1P43005 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC14.34□□□□□ -0.11
SLC1A1P43005 WASHC5-202ENST00000517845 3667 ntTSL 2 BASIC14.34□□□□□ -0.11
SLC1A1P43005 IKZF1-206ENST00000359197 3487 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SLC1A1P43005 DLGAP1-205ENST00000400150 5332 ntTSL 5 BASIC14.34□□□□□ -0.11
SLC1A1P43005 AMOTL2-202ENST00000422605 4335 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
SLC1A1P43005 AL359915.2-202ENST00000440150 2469 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SLC1A1P43005 DRD2-210ENST00000544518 2473 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SLC1A1P43005 NISCH-207ENST00000479054 5173 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
SLC1A1P43005 AC244453.2-201ENST00000457996 3543 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SLC1A1P43005 API5-208ENST00000531273 1868 ntTSL 2 BASIC14.34□□□□□ -0.11
SLC1A1P43005 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SLC1A1P43005 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SLC1A1P43005 PAX5-204ENST00000377852 1472 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SLC1A1P43005 CDK11B-203ENST00000341832 2998 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SLC1A1P43005 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SLC1A1P43005 OR2W2P-201ENST00000406313 909 ntBASIC14.34□□□□□ -0.11
SLC1A1P43005 RPL3P2-204ENST00000413027 1203 ntBASIC14.34□□□□□ -0.11
SLC1A1P43005 ELFN1-AS1-201ENST00000415399 636 ntTSL 5 BASIC14.34□□□□□ -0.11
SLC1A1P43005 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC14.34□□□□□ -0.11
SLC1A1P43005 ACTG1P2-201ENST00000415776 1125 ntBASIC14.34□□□□□ -0.11
SLC1A1P43005 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC14.34□□□□□ -0.11
SLC1A1P43005 ACTG1P11-201ENST00000425411 1125 ntBASIC14.34□□□□□ -0.11
SLC1A1P43005 C3orf35-206ENST00000452017 513 ntAPPRIS P5 TSL 5 BASIC14.34□□□□□ -0.11
SLC1A1P43005 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SLC1A1P43005 SCARNA20.5-201ENST00000516991 142 ntBASIC14.34□□□□□ -0.11
SLC1A1P43005 AC069185.1-202ENST00000533405 471 ntTSL 3 BASIC14.34□□□□□ -0.11
SLC1A1P43005 NAA40-205ENST00000539656 577 ntTSL 4 BASIC14.34□□□□□ -0.11
SLC1A1P43005 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC14.34□□□□□ -0.11
SLC1A1P43005 AGAP12P-202ENST00000603888 2141 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SLC1A1P43005 AC012087.1-201ENST00000608068 809 ntTSL 5 BASIC14.34□□□□□ -0.11
SLC1A1P43005 AL591926.3-201ENST00000611630 238 ntBASIC14.34□□□□□ -0.11
SLC1A1P43005 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SLC1A1P43005 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
SLC1A1P43005 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
SLC1A1P43005 SCNN1B-202ENST00000343070 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SLC1A1P43005 AHI1-201ENST00000265602 4335 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
SLC1A1P43005 DHX34-201ENST00000328771 4372 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
SLC1A1P43005 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SLC1A1P43005 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
SLC1A1P43005 ARAP1-202ENST00000359373 5767 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
SLC1A1P43005 RRAGA-201ENST00000380527 1589 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
SLC1A1P43005 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC14.34□□□□□ -0.11
SLC1A1P43005 DAXX-213ENST00000620164 2462 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
SLC1A1P43005 HECTD3-202ENST00000372172 3610 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
SLC1A1P43005 VMP1-201ENST00000262291 2712 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SLC1A1P43005 CDC42-202ENST00000344548 2256 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SLC1A1P43005 GALC-201ENST00000261304 3883 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SLC1A1P43005 HSPA8-221ENST00000533540 1826 ntTSL 5 BASIC14.34□□□□□ -0.11
SLC1A1P43005 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
SLC1A1P43005 ARHGAP21-217ENST00000612832 5514 ntTSL 5 BASIC14.34□□□□□ -0.11
SLC1A1P43005 SCARB2-215ENST00000639145 4471 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.11
SLC1A1P43005 SIGLEC12-201ENST00000291707 2121 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
SLC1A1P43005 EPS8L3-201ENST00000361852 2130 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
SLC1A1P43005 PROKR1-201ENST00000303786 4273 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
SLC1A1P43005 LINC00563-201ENST00000566370 1400 ntBASIC14.33□□□□□ -0.11
SLC1A1P43005 GLB1L3-201ENST00000389887 3566 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
SLC1A1P43005 KYAT1-201ENST00000302586 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
SLC1A1P43005 CPA5-206ENST00000474905 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
SLC1A1P43005 SLCO2A1-208ENST00000493729 1918 ntTSL 5 BASIC14.33□□□□□ -0.11
SLC1A1P43005 ACIN1-202ENST00000338631 2445 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SLC1A1P43005 BCAS3-221ENST00000588874 2948 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
SLC1A1P43005 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
SLC1A1P43005 SULT2A1-201ENST00000222002 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SLC1A1P43005 ZWILCH-203ENST00000535141 2206 ntTSL 2 BASIC14.33□□□□□ -0.12
SLC1A1P43005 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SLC1A1P43005 PDHB-201ENST00000302746 1527 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SLC1A1P43005 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SLC1A1P43005 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms