Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
CCDC187A0A096LP49 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC12.92□□□□□ -0.34
CCDC187A0A096LP49 SRC-202ENST00000373558 4304 ntTSL 5 BASIC12.92□□□□□ -0.34
CCDC187A0A096LP49 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
CCDC187A0A096LP49 PAX5-204ENST00000377852 1472 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CCDC187A0A096LP49 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
CCDC187A0A096LP49 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC12.92□□□□□ -0.34
CCDC187A0A096LP49 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
CCDC187A0A096LP49 PRKACB-205ENST00000370688 1905 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CCDC187A0A096LP49 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CCDC187A0A096LP49 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CCDC187A0A096LP49 ARR3-201ENST00000307959 1292 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
CCDC187A0A096LP49 PROZ-201ENST00000342783 1551 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
CCDC187A0A096LP49 MIR339-201ENST00000362153 94 ntBASIC12.92□□□□□ -0.34
CCDC187A0A096LP49 NQO2-204ENST00000380454 851 ntTSL 2 BASIC12.92□□□□□ -0.34
CCDC187A0A096LP49 CPSF4L-202ENST00000397671 1275 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
CCDC187A0A096LP49 MRPS12-202ENST00000402029 929 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CCDC187A0A096LP49 MED15P3-201ENST00000413613 326 ntBASIC12.92□□□□□ -0.34
CCDC187A0A096LP49 KRT18P44-201ENST00000416086 1285 ntBASIC12.92□□□□□ -0.34
CCDC187A0A096LP49 AC002127.2-201ENST00000444032 792 ntTSL 3 BASIC12.92□□□□□ -0.34
CCDC187A0A096LP49 SNORA47-201ENST00000458862 138 ntBASIC12.92□□□□□ -0.34
CCDC187A0A096LP49 ARHGEF26-AS1-203ENST00000480639 582 ntTSL 2 BASIC12.92□□□□□ -0.34
CCDC187A0A096LP49 RN7SL523P-201ENST00000484401 298 ntBASIC12.92□□□□□ -0.34
CCDC187A0A096LP49 C10orf91-203ENST00000490765 462 ntTSL 3 BASIC12.92□□□□□ -0.34
CCDC187A0A096LP49 CDK7-211ENST00000514676 1164 ntTSL 5 BASIC12.92□□□□□ -0.34
CCDC187A0A096LP49 TIMM10-202ENST00000525158 530 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
CCDC187A0A096LP49 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
CCDC187A0A096LP49 NPAS3-209ENST00000551008 1002 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CCDC187A0A096LP49 DUT-207ENST00000559416 635 ntTSL 2 BASIC12.92□□□□□ -0.34
CCDC187A0A096LP49 AC105133.1-201ENST00000559749 742 ntTSL 3 BASIC12.92□□□□□ -0.34
CCDC187A0A096LP49 AC133555.4-201ENST00000569081 152 ntBASIC12.92□□□□□ -0.34
CCDC187A0A096LP49 AC068152.1-205ENST00000575173 1081 ntTSL 3 BASIC12.92□□□□□ -0.34
CCDC187A0A096LP49 RN7SL162P-201ENST00000579233 292 ntBASIC12.92□□□□□ -0.34
CCDC187A0A096LP49 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
CCDC187A0A096LP49 AC068675.1-201ENST00000588996 561 ntTSL 4 BASIC12.92□□□□□ -0.34
CCDC187A0A096LP49 AC080013.5-201ENST00000607044 679 ntBASIC12.92□□□□□ -0.34
CCDC187A0A096LP49 SFTPA2-205ENST00000640627 195 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CCDC187A0A096LP49 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CCDC187A0A096LP49 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CCDC187A0A096LP49 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
CCDC187A0A096LP49 HRH2-202ENST00000377291 2561 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CCDC187A0A096LP49 TFG-208ENST00000490574 1696 ntAPPRIS P3 TSL 3 BASIC12.92□□□□□ -0.34
CCDC187A0A096LP49 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CCDC187A0A096LP49 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CCDC187A0A096LP49 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC12.92□□□□□ -0.34
CCDC187A0A096LP49 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
CCDC187A0A096LP49 TKT-201ENST00000296289 1931 ntTSL 5 BASIC12.92□□□□□ -0.34
CCDC187A0A096LP49 OS9-207ENST00000439210 1946 ntTSL 2 BASIC12.92□□□□□ -0.34
CCDC187A0A096LP49 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CCDC187A0A096LP49 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CCDC187A0A096LP49 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC12.91□□□□□ -0.34
CCDC187A0A096LP49 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
CCDC187A0A096LP49 LINC01230-201ENST00000625222 3017 ntBASIC12.91□□□□□ -0.34
CCDC187A0A096LP49 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CCDC187A0A096LP49 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
CCDC187A0A096LP49 AC024075.2-201ENST00000598112 1473 ntBASIC12.91□□□□□ -0.34
CCDC187A0A096LP49 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC12.91□□□□□ -0.34
CCDC187A0A096LP49 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CCDC187A0A096LP49 AL008638.4-201ENST00000624792 1315 ntBASIC12.91□□□□□ -0.34
CCDC187A0A096LP49 TTN-AS1-264ENST00000627564 1319 ntTSL 5 BASIC12.91□□□□□ -0.34
CCDC187A0A096LP49 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
CCDC187A0A096LP49 SESN3-201ENST00000278499 1710 ntTSL 2 BASIC12.91□□□□□ -0.34
CCDC187A0A096LP49 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC12.91□□□□□ -0.34
CCDC187A0A096LP49 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CCDC187A0A096LP49 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
CCDC187A0A096LP49 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC12.91□□□□□ -0.34
CCDC187A0A096LP49 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC12.91□□□□□ -0.34
CCDC187A0A096LP49 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
CCDC187A0A096LP49 CCNB2-201ENST00000288207 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CCDC187A0A096LP49 Z98885.2-201ENST00000565177 1567 ntTSL 2 BASIC12.91□□□□□ -0.34
CCDC187A0A096LP49 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC12.91□□□□□ -0.34
CCDC187A0A096LP49 AC020763.3-201ENST00000625095 2904 ntBASIC12.91□□□□□ -0.34
CCDC187A0A096LP49 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC12.91□□□□□ -0.34
CCDC187A0A096LP49 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC12.91□□□□□ -0.34
CCDC187A0A096LP49 AC239809.3-201ENST00000599640 4266 ntTSL 5 BASIC12.91□□□□□ -0.34
CCDC187A0A096LP49 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
CCDC187A0A096LP49 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CCDC187A0A096LP49 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
CCDC187A0A096LP49 SNORD88B-201ENST00000408454 91 ntBASIC12.91□□□□□ -0.34
CCDC187A0A096LP49 LINC02026-202ENST00000414309 772 ntTSL 3 BASIC12.91□□□□□ -0.34
CCDC187A0A096LP49 AC093495.1-201ENST00000420253 1067 ntTSL 4 BASIC12.91□□□□□ -0.34
CCDC187A0A096LP49 AC114812.1-201ENST00000421868 689 ntTSL 2 BASIC12.91□□□□□ -0.34
CCDC187A0A096LP49 FDPSP7-201ENST00000429043 1054 ntBASIC12.91□□□□□ -0.34
CCDC187A0A096LP49 CUTA-204ENST00000440279 822 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
CCDC187A0A096LP49 RBM14-205ENST00000443702 732 ntTSL 3 BASIC12.91□□□□□ -0.34
CCDC187A0A096LP49 PEBP1P3-201ENST00000455475 548 ntBASIC12.91□□□□□ -0.34
CCDC187A0A096LP49 GLUD1P3-201ENST00000507952 896 ntTSL 2 BASIC12.91□□□□□ -0.34
CCDC187A0A096LP49 AC022182.2-201ENST00000525556 859 ntTSL 2 BASIC12.91□□□□□ -0.34
CCDC187A0A096LP49 SAA2-206ENST00000530400 323 ntTSL 3 BASIC12.91□□□□□ -0.34
CCDC187A0A096LP49 AP000920.1-201ENST00000531824 344 ntBASIC12.91□□□□□ -0.34
CCDC187A0A096LP49 AP004550.1-201ENST00000532652 514 ntTSL 3 BASIC12.91□□□□□ -0.34
CCDC187A0A096LP49 AC104590.1-201ENST00000560813 648 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CCDC187A0A096LP49 CARHSP1-208ENST00000567554 598 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
CCDC187A0A096LP49 AC004231.3-201ENST00000579136 258 ntTSL 3 BASIC12.91□□□□□ -0.34
CCDC187A0A096LP49 AL513478.2-202ENST00000621949 835 ntTSL 3 BASIC12.91□□□□□ -0.34
CCDC187A0A096LP49 CR392039.2-201ENST00000623182 509 ntBASIC12.91□□□□□ -0.34
CCDC187A0A096LP49 FAM189A2-202ENST00000303068 2051 ntTSL 2 BASIC12.91□□□□□ -0.34
CCDC187A0A096LP49 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
CCDC187A0A096LP49 TCAM1P-207ENST00000485295 1537 ntBASIC12.91□□□□□ -0.34
CCDC187A0A096LP49 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms