Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 AL354989.2-201ENST00000435838 1540 ntBASIC11.28□□□□□ -0.6
RCL1Q9Y2P8 REXO5-208ENST00000564274 2447 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
RCL1Q9Y2P8 KCNAB1-215ENST00000618897 4437 ntTSL 5 BASIC11.28□□□□□ -0.6
RCL1Q9Y2P8 AL359510.2-201ENST00000624958 2249 ntBASIC11.28□□□□□ -0.6
RCL1Q9Y2P8 C12orf66-201ENST00000311915 2698 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
RCL1Q9Y2P8 PCDHB4-201ENST00000194152 3825 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
RCL1Q9Y2P8 RAB6A-201ENST00000310653 3389 ntAPPRIS P5 TSL 1 (best) BASIC11.28□□□□□ -0.6
RCL1Q9Y2P8 PPP1R12B-214ENST00000491336 2046 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
RCL1Q9Y2P8 CYP11B1-203ENST00000377675 2280 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
RCL1Q9Y2P8 AC009542.1-201ENST00000412549 1810 ntTSL 2 BASIC11.28□□□□□ -0.6
RCL1Q9Y2P8 GNPDA1-210ENST00000508177 2980 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
RCL1Q9Y2P8 PRKG2-201ENST00000264399 4822 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
RCL1Q9Y2P8 USP20-202ENST00000358355 4371 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
RCL1Q9Y2P8 TJAP1-202ENST00000372444 2778 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
RCL1Q9Y2P8 TJAP1-203ENST00000372445 2751 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
RCL1Q9Y2P8 DDR1-262ENST00000508312 3073 ntAPPRIS ALT2 TSL 2 BASIC11.27□□□□□ -0.6
RCL1Q9Y2P8 MCM7-213ENST00000621318 3084 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
RCL1Q9Y2P8 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
RCL1Q9Y2P8 NBN-203ENST00000409330 4523 ntTSL 5 BASIC11.27□□□□□ -0.6
RCL1Q9Y2P8 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
RCL1Q9Y2P8 PNMA5-204ENST00000452693 3113 ntAPPRIS P2 TSL 2 BASIC11.27□□□□□ -0.6
RCL1Q9Y2P8 AC104590.1-202ENST00000558368 1921 ntBASIC11.27□□□□□ -0.6
RCL1Q9Y2P8 PML-207ENST00000435786 3643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
RCL1Q9Y2P8 MLX-203ENST00000435881 2428 ntAPPRIS ALT1 TSL 1 (best) BASIC11.27□□□□□ -0.6
RCL1Q9Y2P8 FBN3-201ENST00000270509 9232 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
RCL1Q9Y2P8 TMEM182-201ENST00000409173 3198 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
RCL1Q9Y2P8 RPL13AP3-202ENST00000494676 1473 ntBASIC11.27□□□□□ -0.6
RCL1Q9Y2P8 KRT8P4-201ENST00000509735 1454 ntBASIC11.27□□□□□ -0.6
RCL1Q9Y2P8 BCL2L13-202ENST00000337612 4905 ntTSL 2 BASIC11.27□□□□□ -0.61
RCL1Q9Y2P8 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
RCL1Q9Y2P8 BOLL-201ENST00000282278 2742 ntTSL 2 BASIC11.27□□□□□ -0.61
RCL1Q9Y2P8 ABCC3-201ENST00000285238 5716 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
RCL1Q9Y2P8 CORO7-PAM16-202ENST00000572467 3284 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.61
RCL1Q9Y2P8 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC11.27□□□□□ -0.61
RCL1Q9Y2P8 MSRA-201ENST00000317173 1536 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
RCL1Q9Y2P8 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
RCL1Q9Y2P8 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC11.27□□□□□ -0.61
RCL1Q9Y2P8 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC11.27□□□□□ -0.61
RCL1Q9Y2P8 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
RCL1Q9Y2P8 AC092580.1-201ENST00000433998 658 ntBASIC11.27□□□□□ -0.61
RCL1Q9Y2P8 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC11.27□□□□□ -0.61
RCL1Q9Y2P8 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC11.27□□□□□ -0.61
RCL1Q9Y2P8 AC002472.2-201ENST00000442739 958 ntBASIC11.27□□□□□ -0.61
RCL1Q9Y2P8 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
RCL1Q9Y2P8 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC11.27□□□□□ -0.61
RCL1Q9Y2P8 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
RCL1Q9Y2P8 TDH-203ENST00000531764 1110 ntBASIC11.27□□□□□ -0.61
RCL1Q9Y2P8 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC11.27□□□□□ -0.61
RCL1Q9Y2P8 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
RCL1Q9Y2P8 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC11.27□□□□□ -0.61
RCL1Q9Y2P8 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
RCL1Q9Y2P8 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC11.27□□□□□ -0.61
RCL1Q9Y2P8 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC11.27□□□□□ -0.61
RCL1Q9Y2P8 AP001462.1-201ENST00000594089 452 ntBASIC11.27□□□□□ -0.61
RCL1Q9Y2P8 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC11.27□□□□□ -0.61
RCL1Q9Y2P8 DUSP22-211ENST00000604971 3824 ntTSL 2 BASIC11.27□□□□□ -0.61
RCL1Q9Y2P8 ZACNP1-201ENST00000612259 710 ntBASIC11.27□□□□□ -0.61
RCL1Q9Y2P8 AC009118.2-201ENST00000613275 655 ntBASIC11.27□□□□□ -0.61
RCL1Q9Y2P8 AC006254.1-201ENST00000468472 5640 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.61
RCL1Q9Y2P8 CCDC92-208ENST00000545135 4883 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.61
RCL1Q9Y2P8 SYMPK-201ENST00000245934 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
RCL1Q9Y2P8 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC11.27□□□□□ -0.61
RCL1Q9Y2P8 MYO9B-206ENST00000595618 7623 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
RCL1Q9Y2P8 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC11.27□□□□□ -0.61
RCL1Q9Y2P8 EPS15L1-201ENST00000248070 2924 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
RCL1Q9Y2P8 SUCO-209ENST00000610051 2925 ntTSL 2 BASIC11.27□□□□□ -0.61
RCL1Q9Y2P8 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC11.27□□□□□ -0.61
RCL1Q9Y2P8 AXIN2-209ENST00000618960 4060 ntTSL 5 BASIC11.27□□□□□ -0.61
RCL1Q9Y2P8 KCNK10-202ENST00000319231 2725 ntAPPRIS P4 TSL 1 (best) BASIC11.27□□□□□ -0.61
RCL1Q9Y2P8 PDP1-202ENST00000396200 4358 ntAPPRIS ALT1 TSL 4 BASIC11.27□□□□□ -0.61
RCL1Q9Y2P8 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
RCL1Q9Y2P8 SLC5A11-211ENST00000569071 1919 ntTSL 5 BASIC11.27□□□□□ -0.61
RCL1Q9Y2P8 PPP6R2-209ENST00000612753 4104 ntAPPRIS ALT2 TSL 2 BASIC11.27□□□□□ -0.61
RCL1Q9Y2P8 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC11.27□□□□□ -0.61
RCL1Q9Y2P8 DDX11-223ENST00000542838 3079 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
RCL1Q9Y2P8 FAM95B1-201ENST00000455995 4236 ntTSL 2 BASIC11.27□□□□□ -0.61
RCL1Q9Y2P8 AC006033.2-201ENST00000609522 1968 ntTSL 2 BASIC11.27□□□□□ -0.61
RCL1Q9Y2P8 AC096564.1-201ENST00000499098 2810 ntTSL 2 BASIC11.27□□□□□ -0.61
RCL1Q9Y2P8 UBP1-204ENST00000447368 3669 ntAPPRIS ALT1 TSL 2 BASIC11.27□□□□□ -0.61
RCL1Q9Y2P8 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC11.26□□□□□ -0.61
RCL1Q9Y2P8 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC11.26□□□□□ -0.61
RCL1Q9Y2P8 AL135960.1-201ENST00000422216 4036 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
RCL1Q9Y2P8 ABCA3-201ENST00000301732 6609 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
RCL1Q9Y2P8 TRIM37-201ENST00000262294 4330 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
RCL1Q9Y2P8 ANKRD52-201ENST00000267116 8688 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
RCL1Q9Y2P8 DNAJB12-201ENST00000338820 4360 ntTSL 2 BASIC11.26□□□□□ -0.61
RCL1Q9Y2P8 SLX4-201ENST00000294008 7307 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
RCL1Q9Y2P8 ICE1-201ENST00000296564 7927 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
RCL1Q9Y2P8 AC007541.1-201ENST00000570282 1469 ntBASIC11.26□□□□□ -0.61
RCL1Q9Y2P8 ELK1-201ENST00000247161 2695 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
RCL1Q9Y2P8 YY1AP1-205ENST00000355499 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
RCL1Q9Y2P8 SP7-201ENST00000303846 2971 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
RCL1Q9Y2P8 CCBE1-201ENST00000398179 5979 ntTSL 5 BASIC11.26□□□□□ -0.61
RCL1Q9Y2P8 GUCY1A3-205ENST00000506455 2715 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
RCL1Q9Y2P8 CTCFL-218ENST00000608440 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
RCL1Q9Y2P8 AL354861.3-201ENST00000600140 2412 ntBASIC11.26□□□□□ -0.61
RCL1Q9Y2P8 ALDH4A1-202ENST00000375341 3363 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
RCL1Q9Y2P8 GYG2-204ENST00000381163 3393 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
RCL1Q9Y2P8 CHD3-203ENST00000380358 7356 ntTSL 2 BASIC11.26□□□□□ -0.61
RCL1Q9Y2P8 PARN-203ENST00000437198 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms