Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 LINC02036-201ENST00000415869 910 ntTSL 3 BASIC16.83■□□□□ 0.28
RC3H1Q5TC82 AL138885.2-201ENST00000420389 539 ntTSL 3 BASIC16.83■□□□□ 0.28
RC3H1Q5TC82 HNRNPA1P33-201ENST00000421426 561 ntBASIC16.83■□□□□ 0.28
RC3H1Q5TC82 POM121L4P-202ENST00000427789 1891 ntBASIC16.83■□□□□ 0.28
RC3H1Q5TC82 IP6K2-211ENST00000432678 1309 ntTSL 2 BASIC16.83■□□□□ 0.28
RC3H1Q5TC82 AL591368.1-201ENST00000437181 1449 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RC3H1Q5TC82 DLG4-206ENST00000485100 1004 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RC3H1Q5TC82 UGT3A1-203ENST00000503189 1902 ntTSL 2 BASIC16.83■□□□□ 0.28
RC3H1Q5TC82 KRT18P63-201ENST00000505463 979 ntBASIC16.83■□□□□ 0.28
RC3H1Q5TC82 SCOC-209ENST00000512749 841 ntAPPRIS ALT1 TSL 3 BASIC16.83■□□□□ 0.28
RC3H1Q5TC82 ADRA1A-210ENST00000519229 1838 ntTSL 5 BASIC16.83■□□□□ 0.28
RC3H1Q5TC82 RPL10P8-201ENST00000522888 313 ntBASIC16.83■□□□□ 0.28
RC3H1Q5TC82 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC16.83■□□□□ 0.28
RC3H1Q5TC82 AC044802.2-201ENST00000551187 434 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RC3H1Q5TC82 IFI27L1-203ENST00000553664 647 ntTSL 5 BASIC16.83■□□□□ 0.28
RC3H1Q5TC82 RAB42P1-201ENST00000555078 316 ntBASIC16.83■□□□□ 0.28
RC3H1Q5TC82 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
RC3H1Q5TC82 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC16.83■□□□□ 0.28
RC3H1Q5TC82 AC100788.1-201ENST00000591108 945 ntTSL 5 BASIC16.83■□□□□ 0.28
RC3H1Q5TC82 AL109983.1-201ENST00000603234 646 ntBASIC16.83■□□□□ 0.28
RC3H1Q5TC82 RN7SL341P-201ENST00000613745 298 ntBASIC16.83■□□□□ 0.28
RC3H1Q5TC82 PRAMEF25-201ENST00000614839 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RC3H1Q5TC82 AC112702.1-201ENST00000623712 366 ntBASIC16.83■□□□□ 0.28
RC3H1Q5TC82 PRAMEF26-201ENST00000624207 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RC3H1Q5TC82 AC021072.1-201ENST00000635789 835 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
RC3H1Q5TC82 AL139823.1-201ENST00000641871 1225 ntBASIC16.83■□□□□ 0.28
RC3H1Q5TC82 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
RC3H1Q5TC82 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC16.83■□□□□ 0.28
RC3H1Q5TC82 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RC3H1Q5TC82 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RC3H1Q5TC82 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
RC3H1Q5TC82 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC16.82■□□□□ 0.28
RC3H1Q5TC82 HSPA6-201ENST00000309758 2371 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
RC3H1Q5TC82 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
RC3H1Q5TC82 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC16.82■□□□□ 0.28
RC3H1Q5TC82 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
RC3H1Q5TC82 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RC3H1Q5TC82 PSG8-AS1-201ENST00000425668 1873 ntTSL 2 BASIC16.82■□□□□ 0.28
RC3H1Q5TC82 FMR1-218ENST00000621447 1832 ntTSL 3 BASIC16.82■□□□□ 0.28
RC3H1Q5TC82 AC135506.1-201ENST00000603877 1799 ntBASIC16.82■□□□□ 0.28
RC3H1Q5TC82 Z98259.1-201ENST00000564261 1697 ntBASIC16.82■□□□□ 0.28
RC3H1Q5TC82 GMPR2-205ENST00000456667 1484 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RC3H1Q5TC82 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
RC3H1Q5TC82 MAP7-205ENST00000544465 2744 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
RC3H1Q5TC82 SEM1-201ENST00000248566 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RC3H1Q5TC82 DEGS1-202ENST00000391877 1345 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
RC3H1Q5TC82 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RC3H1Q5TC82 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RC3H1Q5TC82 RNASE8-201ENST00000308227 634 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
RC3H1Q5TC82 KRTAP10-8-201ENST00000334662 876 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
RC3H1Q5TC82 OR2T27-201ENST00000344889 954 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
RC3H1Q5TC82 MRPL55-210ENST00000366736 660 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
RC3H1Q5TC82 COX4I2-201ENST00000376075 693 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RC3H1Q5TC82 MRPL36-201ENST00000382647 587 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
RC3H1Q5TC82 NANOS3-202ENST00000397555 769 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
RC3H1Q5TC82 KRTAP10-12-201ENST00000400365 873 ntAPPRIS P2 BASIC16.82■□□□□ 0.28
RC3H1Q5TC82 MYH9-202ENST00000401701 789 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RC3H1Q5TC82 SYCE3-201ENST00000402753 342 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RC3H1Q5TC82 GSTM2P1-201ENST00000405166 654 ntBASIC16.82■□□□□ 0.28
RC3H1Q5TC82 AC004910.1-201ENST00000433493 787 ntBASIC16.82■□□□□ 0.28
RC3H1Q5TC82 Z84721.1-201ENST00000438841 372 ntBASIC16.82■□□□□ 0.28
RC3H1Q5TC82 HNRNPA1P73-201ENST00000446472 928 ntBASIC16.82■□□□□ 0.28
RC3H1Q5TC82 AC107959.3-201ENST00000520840 484 ntTSL 5 BASIC16.82■□□□□ 0.28
RC3H1Q5TC82 MYL6-210ENST00000548400 573 ntTSL 3 BASIC16.82■□□□□ 0.28
RC3H1Q5TC82 AC005920.4-201ENST00000573301 492 ntTSL 4 BASIC16.82■□□□□ 0.28
RC3H1Q5TC82 INCA1-202ENST00000574617 1260 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
RC3H1Q5TC82 CYP4F10P-201ENST00000589560 752 ntBASIC16.82■□□□□ 0.28
RC3H1Q5TC82 AC012615.6-203ENST00000590531 272 ntTSL 2 BASIC16.82■□□□□ 0.28
RC3H1Q5TC82 UBA52-214ENST00000599595 692 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
RC3H1Q5TC82 AC108673.2-201ENST00000608909 565 ntBASIC16.82■□□□□ 0.28
RC3H1Q5TC82 AL117379.1-201ENST00000619319 677 ntBASIC16.82■□□□□ 0.28
RC3H1Q5TC82 AC005609.1-201ENST00000625195 617 ntTSL 5 BASIC16.82■□□□□ 0.28
RC3H1Q5TC82 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
RC3H1Q5TC82 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
RC3H1Q5TC82 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RC3H1Q5TC82 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RC3H1Q5TC82 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RC3H1Q5TC82 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC16.82■□□□□ 0.28
RC3H1Q5TC82 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RC3H1Q5TC82 ZNF582-201ENST00000301310 2824 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RC3H1Q5TC82 ATP6V1B1-201ENST00000234396 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RC3H1Q5TC82 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RC3H1Q5TC82 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC16.82■□□□□ 0.28
RC3H1Q5TC82 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
RC3H1Q5TC82 ZP4-201ENST00000366570 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RC3H1Q5TC82 SERPING1-202ENST00000340687 1719 ntTSL 5 BASIC16.82■□□□□ 0.28
RC3H1Q5TC82 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
RC3H1Q5TC82 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RC3H1Q5TC82 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RC3H1Q5TC82 KATNAL1-202ENST00000380617 1634 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
RC3H1Q5TC82 LINC00511-213ENST00000581549 2265 ntTSL 2 BASIC16.81■□□□□ 0.28
RC3H1Q5TC82 PRAME-205ENST00000405655 2179 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
RC3H1Q5TC82 TMPRSS4-213ENST00000522824 2052 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
RC3H1Q5TC82 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC16.81■□□□□ 0.28
RC3H1Q5TC82 AC106785.2-201ENST00000564385 1319 ntBASIC16.81■□□□□ 0.28
RC3H1Q5TC82 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RC3H1Q5TC82 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
RC3H1Q5TC82 OR52L1-201ENST00000332249 1094 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
RC3H1Q5TC82 LINC01678-202ENST00000424921 475 ntTSL 3 BASIC16.81■□□□□ 0.28
RC3H1Q5TC82 AC069421.1-201ENST00000447462 323 ntBASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms