Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 KCCAT198-201ENST00000549251 549 ntTSL 4 BASIC12.24□□□□□ -0.45
GFRA1P56159 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC12.24□□□□□ -0.45
GFRA1P56159 DUOXA1-205ENST00000558422 1678 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
GFRA1P56159 GOLGA2P7-209ENST00000560408 745 ntBASIC12.24□□□□□ -0.45
GFRA1P56159 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC12.24□□□□□ -0.45
GFRA1P56159 HIST2H4A-201ENST00000578186 583 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
GFRA1P56159 C17orf62-216ENST00000578919 841 ntAPPRIS P1 TSL 3 BASIC12.24□□□□□ -0.45
GFRA1P56159 AC137723.1-201ENST00000584705 709 ntTSL 3 BASIC12.24□□□□□ -0.45
GFRA1P56159 SMAD7-208ENST00000591805 1152 ntTSL 2 BASIC12.24□□□□□ -0.45
GFRA1P56159 KXD1-211ENST00000599319 707 ntAPPRIS P1 TSL 3 BASIC12.24□□□□□ -0.45
GFRA1P56159 H2BFS-201ENST00000599962 460 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
GFRA1P56159 AC011247.3-201ENST00000603297 438 ntBASIC12.24□□□□□ -0.45
GFRA1P56159 MECP2-213ENST00000622433 1071 ntTSL 5 BASIC12.24□□□□□ -0.45
GFRA1P56159 FAM138F-201ENST00000631376 1183 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
GFRA1P56159 TTC23L-209ENST00000638320 1185 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
GFRA1P56159 HLA-C-210ENST00000640219 976 ntBASIC12.24□□□□□ -0.45
GFRA1P56159 AC002472.4-201ENST00000641915 272 ntBASIC12.24□□□□□ -0.45
GFRA1P56159 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
GFRA1P56159 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
GFRA1P56159 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
GFRA1P56159 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
GFRA1P56159 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
GFRA1P56159 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
GFRA1P56159 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
GFRA1P56159 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
GFRA1P56159 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
GFRA1P56159 AC010327.5-201ENST00000586923 3061 ntBASIC12.24□□□□□ -0.45
GFRA1P56159 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC12.24□□□□□ -0.45
GFRA1P56159 CAMKK2-204ENST00000392473 2967 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
GFRA1P56159 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
GFRA1P56159 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
GFRA1P56159 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
GFRA1P56159 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC12.24□□□□□ -0.45
GFRA1P56159 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
GFRA1P56159 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC12.23□□□□□ -0.45
GFRA1P56159 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC12.23□□□□□ -0.45
GFRA1P56159 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
GFRA1P56159 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
GFRA1P56159 GFI1B-202ENST00000372122 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
GFRA1P56159 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
GFRA1P56159 KIR2DL3-201ENST00000342376 1590 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
GFRA1P56159 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
GFRA1P56159 RBFOX3-203ENST00000580155 1519 ntAPPRIS P2 TSL 2 BASIC12.23□□□□□ -0.45
GFRA1P56159 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
GFRA1P56159 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
GFRA1P56159 PAIP2-201ENST00000265192 1459 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
GFRA1P56159 SRP9-201ENST00000304786 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
GFRA1P56159 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC12.23□□□□□ -0.45
GFRA1P56159 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
GFRA1P56159 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
GFRA1P56159 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
GFRA1P56159 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
GFRA1P56159 UBA2-201ENST00000246548 4023 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
GFRA1P56159 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
GFRA1P56159 AXL-203ENST00000593513 2557 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
GFRA1P56159 RPL10L-201ENST00000298283 812 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
GFRA1P56159 C20orf141-201ENST00000380589 730 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
GFRA1P56159 PPM1N-205ENST00000401705 771 ntTSL 3 BASIC12.23□□□□□ -0.45
GFRA1P56159 PPIL3-205ENST00000409449 756 ntTSL 5 BASIC12.23□□□□□ -0.45
GFRA1P56159 LINC01656-201ENST00000415702 630 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
GFRA1P56159 AC093673.1-201ENST00000429630 648 ntTSL 2 BASIC12.23□□□□□ -0.45
GFRA1P56159 RPL13AP19-201ENST00000434320 584 ntBASIC12.23□□□□□ -0.45
GFRA1P56159 AL662797.1-201ENST00000442852 799 ntTSL 3 BASIC12.23□□□□□ -0.45
GFRA1P56159 C17orf58-202ENST00000449250 1082 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
GFRA1P56159 AC074389.3-201ENST00000450458 454 ntTSL 3 BASIC12.23□□□□□ -0.45
GFRA1P56159 RN7SL128P-201ENST00000467883 305 ntBASIC12.23□□□□□ -0.45
GFRA1P56159 AL157792.1-201ENST00000488281 530 ntBASIC12.23□□□□□ -0.45
GFRA1P56159 ALG1L3P-201ENST00000503331 765 ntBASIC12.23□□□□□ -0.45
GFRA1P56159 TBC1D3P6-201ENST00000505954 962 ntBASIC12.23□□□□□ -0.45
GFRA1P56159 AC003982.2-201ENST00000536933 365 ntTSL 3 BASIC12.23□□□□□ -0.45
GFRA1P56159 ZNF124-206ENST00000543802 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
GFRA1P56159 AC141586.1-203ENST00000567242 366 ntBASIC12.23□□□□□ -0.45
GFRA1P56159 SCAMP5-216ENST00000568081 710 ntTSL 2 BASIC12.23□□□□□ -0.45
GFRA1P56159 FAM187B2P-201ENST00000577135 713 ntBASIC12.23□□□□□ -0.45
GFRA1P56159 AP005264.6-204ENST00000588436 719 ntBASIC12.23□□□□□ -0.45
GFRA1P56159 NMRK2-202ENST00000593949 869 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
GFRA1P56159 NMRK2-204ENST00000599576 691 ntTSL 3 BASIC12.23□□□□□ -0.45
GFRA1P56159 Z82244.1-201ENST00000631502 840 ntBASIC12.23□□□□□ -0.45
GFRA1P56159 EFHC2-202ENST00000420999 2464 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
GFRA1P56159 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC12.23□□□□□ -0.45
GFRA1P56159 OR2V1-204ENST00000641551 2423 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
GFRA1P56159 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
GFRA1P56159 UBE2V1-222ENST00000557021 2258 ntTSL 5 BASIC12.23□□□□□ -0.45
GFRA1P56159 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC12.23□□□□□ -0.45
GFRA1P56159 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
GFRA1P56159 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
GFRA1P56159 SNCA-204ENST00000394989 3167 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
GFRA1P56159 WDR81-205ENST00000437219 3184 ntTSL 2 BASIC12.23□□□□□ -0.45
GFRA1P56159 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
GFRA1P56159 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC12.23□□□□□ -0.45
GFRA1P56159 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
GFRA1P56159 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC12.23□□□□□ -0.45
GFRA1P56159 PXK-210ENST00000479241 2817 ntTSL 2 BASIC12.23□□□□□ -0.45
GFRA1P56159 AC073548.1-201ENST00000624088 1882 ntBASIC12.23□□□□□ -0.45
GFRA1P56159 F2-205ENST00000530231 1849 ntTSL 5 BASIC12.23□□□□□ -0.45
GFRA1P56159 ADGRG3-201ENST00000333493 2728 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
GFRA1P56159 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC12.23□□□□□ -0.45
GFRA1P56159 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
GFRA1P56159 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
GFRA1P56159 AC008040.5-201ENST00000599781 1781 ntBASIC12.23□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms