Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 RN7SKP203-201ENST00000363618 332 ntBASIC17.05■□□□□ 0.32
COL15A1P39059 RN7SKP71-201ENST00000364558 318 ntBASIC17.05■□□□□ 0.32
COL15A1P39059 7SK.1-201ENST00000365328 331 ntBASIC17.05■□□□□ 0.32
COL15A1P39059 AC096536.3-201ENST00000415336 575 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
COL15A1P39059 PLA2G6-210ENST00000435484 612 ntTSL 4 BASIC17.05■□□□□ 0.32
COL15A1P39059 AF186996.6-201ENST00000485294 149 ntBASIC17.05■□□□□ 0.32
COL15A1P39059 TIMMDC1-207ENST00000493694 710 ntTSL 2 BASIC17.05■□□□□ 0.32
COL15A1P39059 HAND2-AS1-208ENST00000504740 837 ntTSL 3 BASIC17.05■□□□□ 0.32
COL15A1P39059 AC090200.1-201ENST00000522918 590 ntTSL 2 BASIC17.05■□□□□ 0.32
COL15A1P39059 AC025259.1-201ENST00000550301 647 ntTSL 3 BASIC17.05■□□□□ 0.32
COL15A1P39059 DLX6-203ENST00000555308 666 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
COL15A1P39059 AL136040.1-201ENST00000557775 601 ntTSL 3 BASIC17.05■□□□□ 0.32
COL15A1P39059 AC026583.1-201ENST00000561310 569 ntTSL 4 BASIC17.05■□□□□ 0.32
COL15A1P39059 CLPP-205ENST00000596605 646 ntTSL 2 BASIC17.05■□□□□ 0.32
COL15A1P39059 AC244097.1-201ENST00000621631 1216 ntBASIC17.05■□□□□ 0.32
COL15A1P39059 OAZ3-207ENST00000627780 850 ntTSL 5 BASIC17.05■□□□□ 0.32
COL15A1P39059 OAZ3-209ENST00000635322 745 ntTSL 5 BASIC17.05■□□□□ 0.32
COL15A1P39059 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
COL15A1P39059 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
COL15A1P39059 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
COL15A1P39059 FAM83A-AS1-202ENST00000520576 1347 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
COL15A1P39059 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
COL15A1P39059 MAP7-205ENST00000544465 2744 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
COL15A1P39059 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
COL15A1P39059 MANEA-AS1-201ENST00000564541 2268 ntBASIC17.05■□□□□ 0.32
COL15A1P39059 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
COL15A1P39059 PGAP2-203ENST00000396986 1837 ntTSL 2 BASIC17.05■□□□□ 0.32
COL15A1P39059 HLF-202ENST00000430986 1385 ntTSL 2 BASIC17.05■□□□□ 0.32
COL15A1P39059 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC17.05■□□□□ 0.32
COL15A1P39059 TNN-203ENST00000622870 3719 ntTSL 5 BASIC17.05■□□□□ 0.32
COL15A1P39059 UBL7-206ENST00000565335 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
COL15A1P39059 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
COL15A1P39059 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
COL15A1P39059 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
COL15A1P39059 MCF2L-209ENST00000397036 1544 ntTSL 2 BASIC17.05■□□□□ 0.32
COL15A1P39059 KRT17P4-205ENST00000579946 2555 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
COL15A1P39059 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
COL15A1P39059 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
COL15A1P39059 ENO2-201ENST00000229277 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
COL15A1P39059 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
COL15A1P39059 IGLV3-9-201ENST00000390316 461 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
COL15A1P39059 RFNG-202ENST00000429557 994 ntTSL 5 BASIC17.04■□□□□ 0.32
COL15A1P39059 TGFA-206ENST00000445399 812 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
COL15A1P39059 UGT1A12P-201ENST00000447084 853 ntBASIC17.04■□□□□ 0.32
COL15A1P39059 KCNC4-AS1-201ENST00000455967 748 ntTSL 2 BASIC17.04■□□□□ 0.32
COL15A1P39059 YBX1P3-201ENST00000468366 909 ntBASIC17.04■□□□□ 0.32
COL15A1P39059 RN7SL672P-201ENST00000474091 317 ntBASIC17.04■□□□□ 0.32
COL15A1P39059 AC122694.1-201ENST00000510987 563 ntTSL 4 BASIC17.04■□□□□ 0.32
COL15A1P39059 NMNAT3-212ENST00000511444 873 ntTSL 3 BASIC17.04■□□□□ 0.32
COL15A1P39059 MSRB1-205ENST00000564908 550 ntTSL 3 BASIC17.04■□□□□ 0.32
COL15A1P39059 AC092720.1-202ENST00000565824 555 ntTSL 4 BASIC17.04■□□□□ 0.32
COL15A1P39059 AC005736.3-201ENST00000571169 244 ntTSL 5 BASIC17.04■□□□□ 0.32
COL15A1P39059 Metazoa_SRP.147-201ENST00000576563 312 ntBASIC17.04■□□□□ 0.32
COL15A1P39059 RN7SL478P-201ENST00000584358 298 ntBASIC17.04■□□□□ 0.32
COL15A1P39059 LINC00969-241ENST00000600527 852 ntTSL 5 BASIC17.04■□□□□ 0.32
COL15A1P39059 AC136475.7-201ENST00000602949 592 ntBASIC17.04■□□□□ 0.32
COL15A1P39059 ZFAS1-208ENST00000618800 597 ntTSL 3 BASIC17.04■□□□□ 0.32
COL15A1P39059 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC17.04■□□□□ 0.32
COL15A1P39059 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC17.04■□□□□ 0.32
COL15A1P39059 BAK1-202ENST00000374467 2136 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
COL15A1P39059 CA6-205ENST00000480186 1493 ntTSL 2 BASIC17.04■□□□□ 0.32
COL15A1P39059 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
COL15A1P39059 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
COL15A1P39059 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
COL15A1P39059 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
COL15A1P39059 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC17.04■□□□□ 0.32
COL15A1P39059 CNBP-207ENST00000502976 1626 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
COL15A1P39059 TRIML2-207ENST00000512729 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
COL15A1P39059 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
COL15A1P39059 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
COL15A1P39059 CDC20B-202ENST00000322374 1679 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
COL15A1P39059 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC17.04■□□□□ 0.32
COL15A1P39059 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
COL15A1P39059 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
COL15A1P39059 MED6-201ENST00000256379 1995 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
COL15A1P39059 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
COL15A1P39059 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
COL15A1P39059 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
COL15A1P39059 STK3-218ENST00000617590 2485 ntTSL 5 BASIC17.03■□□□□ 0.32
COL15A1P39059 AC130686.1-201ENST00000622936 2466 ntBASIC17.03■□□□□ 0.32
COL15A1P39059 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
COL15A1P39059 RNA5SP84-201ENST00000364740 107 ntBASIC17.03■□□□□ 0.32
COL15A1P39059 SLC35F2-201ENST00000375682 1076 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
COL15A1P39059 SAA1-202ENST00000405158 675 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
COL15A1P39059 RPL14-203ENST00000416518 812 ntTSL 3 BASIC17.03■□□□□ 0.32
COL15A1P39059 AC105443.1-201ENST00000433754 712 ntBASIC17.03■□□□□ 0.32
COL15A1P39059 AL353653.1-201ENST00000452336 638 ntTSL 2 BASIC17.03■□□□□ 0.32
COL15A1P39059 KRT18P42-201ENST00000505048 1255 ntBASIC17.03■□□□□ 0.32
COL15A1P39059 TGFBI-207ENST00000508076 1034 ntTSL 2 BASIC17.03■□□□□ 0.32
COL15A1P39059 C5orf63-203ENST00000509733 553 ntTSL 4 BASIC17.03■□□□□ 0.32
COL15A1P39059 OR52V1P-201ENST00000515557 898 ntBASIC17.03■□□□□ 0.32
COL15A1P39059 TRAPPC4-212ENST00000533058 1209 ntTSL 2 BASIC17.03■□□□□ 0.32
COL15A1P39059 TMEM106A-201ENST00000536052 1181 ntTSL 2 BASIC17.03■□□□□ 0.32
COL15A1P39059 AL512356.1-201ENST00000548203 535 ntTSL 3 BASIC17.03■□□□□ 0.32
COL15A1P39059 LINC00643-202ENST00000553426 526 ntTSL 3 BASIC17.03■□□□□ 0.32
COL15A1P39059 AL139099.3-201ENST00000556657 401 ntTSL 3 BASIC17.03■□□□□ 0.32
COL15A1P39059 SULT1A3-206ENST00000563322 906 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
COL15A1P39059 SULT1A4-204ENST00000565290 906 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
COL15A1P39059 LINC02130-201ENST00000566054 518 ntTSL 2 BASIC17.03■□□□□ 0.32
COL15A1P39059 IFNL3P1-201ENST00000595082 501 ntBASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 71.4 ms