Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TPM3P06753 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
TPM3P06753 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC15.46■□□□□ 0.07
TPM3P06753 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
TPM3P06753 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC15.46■□□□□ 0.07
TPM3P06753 PMS2P2-201ENST00000425039 1128 ntBASIC15.46■□□□□ 0.07
TPM3P06753 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC15.46■□□□□ 0.07
TPM3P06753 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC15.46■□□□□ 0.07
TPM3P06753 POM121L10P-201ENST00000436994 1285 ntBASIC15.46■□□□□ 0.07
TPM3P06753 AC007551.1-201ENST00000457394 519 ntBASIC15.46■□□□□ 0.07
TPM3P06753 RN7SL752P-201ENST00000463779 287 ntBASIC15.46■□□□□ 0.07
TPM3P06753 OARD1-208ENST00000469104 704 ntTSL 2 BASIC15.46■□□□□ 0.07
TPM3P06753 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC15.46■□□□□ 0.07
TPM3P06753 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
TPM3P06753 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC15.46■□□□□ 0.07
TPM3P06753 APRT-204ENST00000563655 709 ntTSL 5 BASIC15.46■□□□□ 0.07
TPM3P06753 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC15.46■□□□□ 0.07
TPM3P06753 AL356740.1-201ENST00000602192 1297 ntBASIC15.46■□□□□ 0.07
TPM3P06753 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC15.46■□□□□ 0.07
TPM3P06753 RPL35-206ENST00000629845 340 ntTSL 5 BASIC15.46■□□□□ 0.07
TPM3P06753 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC15.46■□□□□ 0.07
TPM3P06753 Z98259.2-201ENST00000641583 609 ntBASIC15.46■□□□□ 0.07
TPM3P06753 NIT1-202ENST00000368008 2081 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
TPM3P06753 RAB15-201ENST00000267512 3391 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
TPM3P06753 USP40-201ENST00000251722 5692 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
TPM3P06753 INIP-203ENST00000374242 4233 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
TPM3P06753 WDR81-205ENST00000437219 3184 ntTSL 2 BASIC15.46■□□□□ 0.06
TPM3P06753 CXCL5-201ENST00000296027 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
TPM3P06753 TMOD1-202ENST00000375175 2516 ntTSL 2 BASIC15.46■□□□□ 0.06
TPM3P06753 ERCC6L2-201ENST00000288985 4564 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
TPM3P06753 ZNF106-205ENST00000565611 5081 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
TPM3P06753 NAA60-214ENST00000572584 2450 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TPM3P06753 AC008764.8-201ENST00000623966 2717 ntBASIC15.45■□□□□ 0.06
TPM3P06753 TNRC6C-207ENST00000588847 8527 ntAPPRIS P4 TSL 5 BASIC15.45■□□□□ 0.06
TPM3P06753 VWA8-203ENST00000379310 7147 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
TPM3P06753 CTAGE10P-201ENST00000318353 2408 ntBASIC15.45■□□□□ 0.06
TPM3P06753 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC15.45■□□□□ 0.06
TPM3P06753 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TPM3P06753 SVOPL-203ENST00000421622 1653 ntTSL 5 BASIC15.45■□□□□ 0.06
TPM3P06753 AC093462.1-201ENST00000621167 1683 ntBASIC15.45■□□□□ 0.06
TPM3P06753 AC119674.2-203ENST00000642129 1675 ntAPPRIS P5 BASIC15.45■□□□□ 0.06
TPM3P06753 ZNF331-201ENST00000253144 5042 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TPM3P06753 PNPLA6-204ENST00000545201 4502 ntTSL 2 BASIC15.45■□□□□ 0.06
TPM3P06753 CEACAM20-201ENST00000611497 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
TPM3P06753 ESPL1-205ENST00000552462 6447 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
TPM3P06753 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC15.45■□□□□ 0.06
TPM3P06753 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TPM3P06753 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TPM3P06753 UBA3-201ENST00000349511 2112 ntAPPRIS ALT1 TSL 2 BASIC15.45■□□□□ 0.06
TPM3P06753 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TPM3P06753 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TPM3P06753 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
TPM3P06753 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC15.45■□□□□ 0.06
TPM3P06753 CNN2P10-201ENST00000443067 918 ntBASIC15.45■□□□□ 0.06
TPM3P06753 AC006122.1-201ENST00000493323 440 ntBASIC15.45■□□□□ 0.06
TPM3P06753 HNRNPA1P36-201ENST00000521313 955 ntBASIC15.45■□□□□ 0.06
TPM3P06753 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TPM3P06753 AC100827.2-201ENST00000563214 1194 ntBASIC15.45■□□□□ 0.06
TPM3P06753 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC15.45■□□□□ 0.06
TPM3P06753 SKA2-205ENST00000580541 689 ntTSL 3 BASIC15.45■□□□□ 0.06
TPM3P06753 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC15.45■□□□□ 0.06
TPM3P06753 AC244669.2-201ENST00000612320 853 ntBASIC15.45■□□□□ 0.06
TPM3P06753 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC15.45■□□□□ 0.06
TPM3P06753 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC15.45■□□□□ 0.06
TPM3P06753 DPP9-214ENST00000598800 3098 ntTSL 5 BASIC15.45■□□□□ 0.06
TPM3P06753 HOPX-202ENST00000337881 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TPM3P06753 SLC26A6-205ENST00000395550 2589 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
TPM3P06753 TREH-202ENST00000397925 1718 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TPM3P06753 ALDH9A1-201ENST00000354775 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TPM3P06753 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC15.45■□□□□ 0.06
TPM3P06753 CCNB2-201ENST00000288207 1556 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TPM3P06753 GNAL-203ENST00000423027 2255 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TPM3P06753 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC15.45■□□□□ 0.06
TPM3P06753 NLRP2-202ENST00000339757 3422 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
TPM3P06753 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC15.44■□□□□ 0.06
TPM3P06753 MYO1C-201ENST00000359786 5145 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TPM3P06753 ZYX-203ENST00000392910 2123 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
TPM3P06753 AP001258.1-201ENST00000501817 2110 ntTSL 5 BASIC15.44■□□□□ 0.06
TPM3P06753 CARHSP1-218ENST00000614449 2931 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
TPM3P06753 KCNMA1-232ENST00000638306 3811 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
TPM3P06753 SRGAP3-202ENST00000383836 8656 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TPM3P06753 SRPK3-208ENST00000489426 4479 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
TPM3P06753 TJAP1-202ENST00000372444 2778 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
TPM3P06753 TJAP1-203ENST00000372445 2751 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TPM3P06753 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TPM3P06753 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TPM3P06753 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TPM3P06753 INHBC-201ENST00000309668 1992 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TPM3P06753 GALNT15-203ENST00000437509 2416 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TPM3P06753 AC005695.1-201ENST00000574307 5672 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TPM3P06753 STX16-NPEPL1-202ENST00000530122 3433 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
TPM3P06753 HDAC7-202ENST00000354334 4065 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
TPM3P06753 HDAC7-201ENST00000080059 4095 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
TPM3P06753 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TPM3P06753 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
TPM3P06753 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
TPM3P06753 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC15.44■□□□□ 0.06
TPM3P06753 MIR661-201ENST00000384842 89 ntBASIC15.44■□□□□ 0.06
TPM3P06753 AC236430.1-201ENST00000402231 743 ntBASIC15.44■□□□□ 0.06
TPM3P06753 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC15.44■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms