Protein–RNA interactions for Protein: Q9P003

CNIH4, Protein cornichon homolog 4, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH4Q9P003 MAP7D2-204ENST00000452324 2233 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
CNIH4Q9P003 FUT3-207ENST00000589620 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CNIH4Q9P003 TMEM25-204ENST00000359862 2395 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
CNIH4Q9P003 ZIK1-201ENST00000307468 2510 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CNIH4Q9P003 WHRN-201ENST00000265134 2847 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CNIH4Q9P003 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CNIH4Q9P003 RIPK4-201ENST00000332512 3889 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CNIH4Q9P003 RNF214-201ENST00000300650 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CNIH4Q9P003 DHX30-201ENST00000348968 3994 ntTSL 5 BASIC12.92□□□□□ -0.34
CNIH4Q9P003 FAM163B-201ENST00000356873 1131 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CNIH4Q9P003 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CNIH4Q9P003 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CNIH4Q9P003 PPP1R11-205ENST00000376772 1731 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CNIH4Q9P003 AL512430.1-201ENST00000392575 860 ntBASIC12.92□□□□□ -0.34
CNIH4Q9P003 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
CNIH4Q9P003 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CNIH4Q9P003 TP53I3-203ENST00000407482 747 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CNIH4Q9P003 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC12.92□□□□□ -0.34
CNIH4Q9P003 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC12.92□□□□□ -0.34
CNIH4Q9P003 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
CNIH4Q9P003 AC136604.1-202ENST00000425471 771 ntBASIC12.92□□□□□ -0.34
CNIH4Q9P003 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC12.92□□□□□ -0.34
CNIH4Q9P003 AL355803.1-201ENST00000455524 188 ntTSL 2 BASIC12.92□□□□□ -0.34
CNIH4Q9P003 AL355376.1-201ENST00000456082 517 ntTSL 3 BASIC12.92□□□□□ -0.34
CNIH4Q9P003 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC12.92□□□□□ -0.34
CNIH4Q9P003 ORAOV1P1-201ENST00000503108 395 ntBASIC12.92□□□□□ -0.34
CNIH4Q9P003 LY6E-208ENST00000520531 490 ntTSL 2 BASIC12.92□□□□□ -0.34
CNIH4Q9P003 TRIM69-206ENST00000559390 2486 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
CNIH4Q9P003 AC145285.5-201ENST00000562217 361 ntBASIC12.92□□□□□ -0.34
CNIH4Q9P003 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC12.92□□□□□ -0.34
CNIH4Q9P003 RN7SL455P-201ENST00000580629 282 ntBASIC12.92□□□□□ -0.34
CNIH4Q9P003 RN7SL190P-201ENST00000582519 257 ntBASIC12.92□□□□□ -0.34
CNIH4Q9P003 TP53-221ENST00000615910 1149 ntTSL 5 BASIC12.92□□□□□ -0.34
CNIH4Q9P003 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
CNIH4Q9P003 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CNIH4Q9P003 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC12.92□□□□□ -0.34
CNIH4Q9P003 PLAT-201ENST00000220809 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CNIH4Q9P003 SPATA12-201ENST00000334325 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CNIH4Q9P003 BEND3P3-201ENST00000611030 2440 ntBASIC12.92□□□□□ -0.34
CNIH4Q9P003 HNRNPLL-209ENST00000449105 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CNIH4Q9P003 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
CNIH4Q9P003 SYNE3-201ENST00000334258 3275 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
CNIH4Q9P003 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
CNIH4Q9P003 PHB-210ENST00000511832 1509 ntTSL 2 BASIC12.92□□□□□ -0.34
CNIH4Q9P003 NINL-203ENST00000422516 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
CNIH4Q9P003 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CNIH4Q9P003 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
CNIH4Q9P003 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC12.92□□□□□ -0.34
CNIH4Q9P003 CATSPERE-203ENST00000366534 3333 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
CNIH4Q9P003 SLC35F2-203ENST00000525071 3331 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
CNIH4Q9P003 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC12.91□□□□□ -0.34
CNIH4Q9P003 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
CNIH4Q9P003 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC12.91□□□□□ -0.34
CNIH4Q9P003 ZNF792-201ENST00000404801 3888 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
CNIH4Q9P003 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC12.91□□□□□ -0.34
CNIH4Q9P003 VAMP2-201ENST00000316509 2153 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
CNIH4Q9P003 AGAP2-203ENST00000547588 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
CNIH4Q9P003 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CNIH4Q9P003 AC006480.2-201ENST00000609770 1337 ntBASIC12.91□□□□□ -0.34
CNIH4Q9P003 ACAP2-201ENST00000326793 7160 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CNIH4Q9P003 GOLGA8IP-201ENST00000340249 1899 ntTSL 2 BASIC12.91□□□□□ -0.34
CNIH4Q9P003 PRR29-202ENST00000412177 3127 ntAPPRIS P3 TSL 2 BASIC12.91□□□□□ -0.34
CNIH4Q9P003 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC12.91□□□□□ -0.34
CNIH4Q9P003 API5-208ENST00000531273 1868 ntTSL 2 BASIC12.91□□□□□ -0.34
CNIH4Q9P003 ZNF721-205ENST00000511833 2966 ntAPPRIS P1 TSL 4 BASIC12.91□□□□□ -0.34
CNIH4Q9P003 AC108024.1-201ENST00000626286 1721 ntBASIC12.91□□□□□ -0.34
CNIH4Q9P003 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
CNIH4Q9P003 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CNIH4Q9P003 BCAP29-201ENST00000005259 4572 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CNIH4Q9P003 RAB3D-201ENST00000222120 4273 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CNIH4Q9P003 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
CNIH4Q9P003 MAD2L1-201ENST00000296509 5468 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CNIH4Q9P003 USP49-201ENST00000373006 3177 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CNIH4Q9P003 RNF43-205ENST00000581868 2610 ntTSL 2 BASIC12.91□□□□□ -0.34
CNIH4Q9P003 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CNIH4Q9P003 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC12.91□□□□□ -0.34
CNIH4Q9P003 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC12.91□□□□□ -0.34
CNIH4Q9P003 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CNIH4Q9P003 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC12.91□□□□□ -0.34
CNIH4Q9P003 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC12.91□□□□□ -0.34
CNIH4Q9P003 ERP29P1-201ENST00000442902 706 ntBASIC12.91□□□□□ -0.34
CNIH4Q9P003 TEX36-AS1-202ENST00000446081 749 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CNIH4Q9P003 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CNIH4Q9P003 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC12.91□□□□□ -0.34
CNIH4Q9P003 AC026310.2-201ENST00000546353 728 ntTSL 4 BASIC12.91□□□□□ -0.34
CNIH4Q9P003 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CNIH4Q9P003 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC12.91□□□□□ -0.34
CNIH4Q9P003 AC011921.1-201ENST00000559739 557 ntTSL 4 BASIC12.91□□□□□ -0.34
CNIH4Q9P003 AP001184.1-201ENST00000637936 376 ntBASIC12.91□□□□□ -0.34
CNIH4Q9P003 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC12.91□□□□□ -0.34
CNIH4Q9P003 PREX1-201ENST00000371941 6636 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CNIH4Q9P003 AC092171.2-201ENST00000444210 3251 ntTSL 5 BASIC12.91□□□□□ -0.34
CNIH4Q9P003 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CNIH4Q9P003 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CNIH4Q9P003 TRIM11-204ENST00000493030 5774 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CNIH4Q9P003 AC006372.4-201ENST00000624122 1543 ntBASIC12.91□□□□□ -0.34
CNIH4Q9P003 KY-202ENST00000503669 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
CNIH4Q9P003 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
CNIH4Q9P003 SLC7A7-201ENST00000285850 2263 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
CNIH4Q9P003 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms