Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 GGTA1P-202ENST00000481534 3429 ntTSL 2 BASIC12.91□□□□□ -0.34
AMBRA1Q9C0C7 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
AMBRA1Q9C0C7 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
AMBRA1Q9C0C7 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
AMBRA1Q9C0C7 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
AMBRA1Q9C0C7 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
AMBRA1Q9C0C7 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC12.91□□□□□ -0.34
AMBRA1Q9C0C7 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC12.91□□□□□ -0.34
AMBRA1Q9C0C7 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC12.91□□□□□ -0.34
AMBRA1Q9C0C7 HNRNPA1P2-207ENST00000432375 960 ntBASIC12.91□□□□□ -0.34
AMBRA1Q9C0C7 RNMTL1P1-201ENST00000454103 560 ntBASIC12.91□□□□□ -0.34
AMBRA1Q9C0C7 ARTN-209ENST00000479128 471 ntTSL 3 BASIC12.91□□□□□ -0.34
AMBRA1Q9C0C7 ZNF767P-206ENST00000513792 565 ntBASIC12.91□□□□□ -0.34
AMBRA1Q9C0C7 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC12.91□□□□□ -0.34
AMBRA1Q9C0C7 FADS2-212ENST00000522639 360 ntTSL 5 BASIC12.91□□□□□ -0.34
AMBRA1Q9C0C7 FOS-206ENST00000555347 1280 ntTSL 2 BASIC12.91□□□□□ -0.34
AMBRA1Q9C0C7 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC12.91□□□□□ -0.34
AMBRA1Q9C0C7 FADS2-215ENST00000574708 385 ntTSL 3 BASIC12.91□□□□□ -0.34
AMBRA1Q9C0C7 BNIP3P13-201ENST00000599968 566 ntBASIC12.91□□□□□ -0.34
AMBRA1Q9C0C7 AL118558.3-201ENST00000607414 1079 ntBASIC12.91□□□□□ -0.34
AMBRA1Q9C0C7 AC015967.2-201ENST00000624092 234 ntBASIC12.91□□□□□ -0.34
AMBRA1Q9C0C7 AC006435.4-201ENST00000625037 234 ntBASIC12.91□□□□□ -0.34
AMBRA1Q9C0C7 AL356737.1-201ENST00000634391 234 ntBASIC12.91□□□□□ -0.34
AMBRA1Q9C0C7 AL139424.3-202ENST00000641619 917 ntBASIC12.91□□□□□ -0.34
AMBRA1Q9C0C7 ADAMTSL2-201ENST00000354484 4068 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
AMBRA1Q9C0C7 VMP1-201ENST00000262291 2712 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
AMBRA1Q9C0C7 NR1H3-217ENST00000467728 2731 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
AMBRA1Q9C0C7 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
AMBRA1Q9C0C7 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
AMBRA1Q9C0C7 DUSP11-202ENST00000443070 2175 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
AMBRA1Q9C0C7 LINC00343-203ENST00000454555 1765 ntTSL 2 BASIC12.91□□□□□ -0.34
AMBRA1Q9C0C7 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
AMBRA1Q9C0C7 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
AMBRA1Q9C0C7 PPP1R26P2-201ENST00000611403 3595 ntBASIC12.91□□□□□ -0.34
AMBRA1Q9C0C7 TRIM60-201ENST00000341062 1867 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
AMBRA1Q9C0C7 DIO1-216ENST00000613679 1856 ntAPPRIS ALT1 TSL 5 BASIC12.91□□□□□ -0.34
AMBRA1Q9C0C7 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC12.91□□□□□ -0.34
AMBRA1Q9C0C7 RAN-210ENST00000541630 1475 ntTSL 2 BASIC12.91□□□□□ -0.34
AMBRA1Q9C0C7 STAT3-202ENST00000389272 2615 ntTSL 2 BASIC12.91□□□□□ -0.34
AMBRA1Q9C0C7 DACT3-AS1-201ENST00000500689 1304 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
AMBRA1Q9C0C7 BISPR-204ENST00000634675 1806 ntTSL 2 BASIC12.9□□□□□ -0.34
AMBRA1Q9C0C7 CSNK1G1-209ENST00000634811 2592 ntAPPRIS ALT1 TSL 5 BASIC12.9□□□□□ -0.34
AMBRA1Q9C0C7 PCMTD1-208ENST00000544451 3697 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
AMBRA1Q9C0C7 BAIAP3-207ENST00000562208 3663 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
AMBRA1Q9C0C7 ABLIM2-206ENST00000447017 2902 ntAPPRIS P4 TSL 1 (best) BASIC12.9□□□□□ -0.34
AMBRA1Q9C0C7 AC020763.3-201ENST00000625095 2904 ntBASIC12.9□□□□□ -0.34
AMBRA1Q9C0C7 FAM168B-202ENST00000409185 5285 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
AMBRA1Q9C0C7 DDX19B-202ENST00000355992 1692 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
AMBRA1Q9C0C7 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
AMBRA1Q9C0C7 SRRM1-201ENST00000323848 4011 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
AMBRA1Q9C0C7 KRT74-201ENST00000305620 2788 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
AMBRA1Q9C0C7 CPT1C-217ENST00000598293 2767 ntAPPRIS P3 TSL 2 BASIC12.9□□□□□ -0.34
AMBRA1Q9C0C7 USP17L7-201ENST00000530447 2022 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
AMBRA1Q9C0C7 TMEM145-203ENST00000598766 2011 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
AMBRA1Q9C0C7 FAM122B-203ENST00000370790 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
AMBRA1Q9C0C7 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
AMBRA1Q9C0C7 PIGS-202ENST00000308360 2877 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
AMBRA1Q9C0C7 BEND6-202ENST00000370746 2379 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
AMBRA1Q9C0C7 EEF2KMT-201ENST00000427587 2390 ntAPPRIS P4 TSL 1 (best) BASIC12.9□□□□□ -0.34
AMBRA1Q9C0C7 NR3C1-204ENST00000394466 3245 ntAPPRIS ALT1 TSL 5 BASIC12.9□□□□□ -0.34
AMBRA1Q9C0C7 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
AMBRA1Q9C0C7 NUDT2-201ENST00000346365 960 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
AMBRA1Q9C0C7 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
AMBRA1Q9C0C7 NUDT2-203ENST00000379158 1075 ntAPPRIS P1 TSL 3 BASIC12.9□□□□□ -0.34
AMBRA1Q9C0C7 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
AMBRA1Q9C0C7 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC12.9□□□□□ -0.34
AMBRA1Q9C0C7 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC12.9□□□□□ -0.34
AMBRA1Q9C0C7 SERPINA13P-202ENST00000478994 924 ntBASIC12.9□□□□□ -0.34
AMBRA1Q9C0C7 RN7SL277P-201ENST00000481521 288 ntBASIC12.9□□□□□ -0.34
AMBRA1Q9C0C7 OARD1-212ENST00000482515 832 ntTSL 2 BASIC12.9□□□□□ -0.34
AMBRA1Q9C0C7 AC021723.1-201ENST00000486306 515 ntBASIC12.9□□□□□ -0.34
AMBRA1Q9C0C7 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC12.9□□□□□ -0.34
AMBRA1Q9C0C7 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC12.9□□□□□ -0.34
AMBRA1Q9C0C7 AL136295.3-201ENST00000558325 850 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
AMBRA1Q9C0C7 CMC2-204ENST00000562713 573 ntTSL 3 BASIC12.9□□□□□ -0.34
AMBRA1Q9C0C7 CMC2-209ENST00000565108 399 ntTSL 2 BASIC12.9□□□□□ -0.34
AMBRA1Q9C0C7 RN7SL455P-201ENST00000580629 282 ntBASIC12.9□□□□□ -0.34
AMBRA1Q9C0C7 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
AMBRA1Q9C0C7 KC6-205ENST00000599934 556 ntTSL 4 BASIC12.9□□□□□ -0.34
AMBRA1Q9C0C7 AL356740.1-201ENST00000602192 1297 ntBASIC12.9□□□□□ -0.34
AMBRA1Q9C0C7 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
AMBRA1Q9C0C7 NUDT2-204ENST00000618590 825 ntAPPRIS P1 TSL 3 BASIC12.9□□□□□ -0.34
AMBRA1Q9C0C7 MIR6727-201ENST00000620702 65 ntBASIC12.9□□□□□ -0.34
AMBRA1Q9C0C7 CYTH1-203ENST00000585509 3315 ntTSL 5 BASIC12.9□□□□□ -0.34
AMBRA1Q9C0C7 NAA60-214ENST00000572584 2450 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
AMBRA1Q9C0C7 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
AMBRA1Q9C0C7 NOX5-202ENST00000388866 2804 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
AMBRA1Q9C0C7 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
AMBRA1Q9C0C7 ABL2-207ENST00000507173 3177 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
AMBRA1Q9C0C7 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
AMBRA1Q9C0C7 CLIC4-201ENST00000374379 4346 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
AMBRA1Q9C0C7 RGS16-201ENST00000367558 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
AMBRA1Q9C0C7 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC12.9□□□□□ -0.34
AMBRA1Q9C0C7 ENDOV-203ENST00000517795 2548 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
AMBRA1Q9C0C7 SLC13A4-201ENST00000354042 2897 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
AMBRA1Q9C0C7 KRT42P-201ENST00000398469 2864 ntTSL 2 BASIC12.9□□□□□ -0.34
AMBRA1Q9C0C7 VCP-201ENST00000358901 4370 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
AMBRA1Q9C0C7 CLASP2-218ENST00000487200 1940 ntTSL 2 BASIC12.9□□□□□ -0.35
AMBRA1Q9C0C7 C6orf62-202ENST00000378119 4134 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
AMBRA1Q9C0C7 KRT15-202ENST00000393974 3758 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms