Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 LINC01002-209ENST00000631858 1761 ntTSL 2 BASIC13.94□□□□□ -0.18
SHROOM3Q8TF72 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SHROOM3Q8TF72 DNAJC14-202ENST00000317287 2774 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
SHROOM3Q8TF72 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC13.94□□□□□ -0.18
SHROOM3Q8TF72 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
SHROOM3Q8TF72 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SHROOM3Q8TF72 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SHROOM3Q8TF72 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC13.94□□□□□ -0.18
SHROOM3Q8TF72 AC021218.1-201ENST00000377722 2536 ntTSL 2 BASIC13.94□□□□□ -0.18
SHROOM3Q8TF72 TRIM69-206ENST00000559390 2486 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
SHROOM3Q8TF72 ALDOA-213ENST00000564595 1663 ntTSL 2 BASIC13.94□□□□□ -0.18
SHROOM3Q8TF72 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SHROOM3Q8TF72 SF1-205ENST00000377394 2854 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SHROOM3Q8TF72 IQCJ-201ENST00000397832 1460 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
SHROOM3Q8TF72 KIAA1614-201ENST00000367587 3309 ntTSL 2 BASIC13.94□□□□□ -0.18
SHROOM3Q8TF72 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SHROOM3Q8TF72 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
SHROOM3Q8TF72 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SHROOM3Q8TF72 PIGC-202ENST00000367728 2630 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
SHROOM3Q8TF72 PMF1-202ENST00000368277 1068 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SHROOM3Q8TF72 ECI2-202ENST00000380118 1407 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SHROOM3Q8TF72 CYB561D1-203ENST00000393709 620 ntAPPRIS ALT1 TSL 4 BASIC13.94□□□□□ -0.18
SHROOM3Q8TF72 ABCD1P4-201ENST00000399687 604 ntBASIC13.94□□□□□ -0.18
SHROOM3Q8TF72 AL357563.1-201ENST00000404728 395 ntBASIC13.94□□□□□ -0.18
SHROOM3Q8TF72 CNRIP1-202ENST00000409559 644 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SHROOM3Q8TF72 PTGES3-203ENST00000436399 941 ntTSL 2 BASIC13.94□□□□□ -0.18
SHROOM3Q8TF72 AL356056.1-201ENST00000437899 369 ntTSL 5 BASIC13.94□□□□□ -0.18
SHROOM3Q8TF72 AL354861.1-201ENST00000445213 355 ntBASIC13.94□□□□□ -0.18
SHROOM3Q8TF72 HOXB-AS3-209ENST00000477144 743 ntTSL 5 BASIC13.94□□□□□ -0.18
SHROOM3Q8TF72 DMKN-256ENST00000492341 738 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
SHROOM3Q8TF72 AC093300.1-201ENST00000510368 1201 ntBASIC13.94□□□□□ -0.18
SHROOM3Q8TF72 C12orf10-207ENST00000549488 840 ntTSL 5 BASIC13.94□□□□□ -0.18
SHROOM3Q8TF72 AC068867.1-201ENST00000559855 150 ntBASIC13.94□□□□□ -0.18
SHROOM3Q8TF72 MIR3940-201ENST00000579148 102 ntBASIC13.94□□□□□ -0.18
SHROOM3Q8TF72 MBP-238ENST00000580402 915 ntTSL 5 BASIC13.94□□□□□ -0.18
SHROOM3Q8TF72 AC145207.8-201ENST00000580897 563 ntTSL 4 BASIC13.94□□□□□ -0.18
SHROOM3Q8TF72 RN7SL596P-201ENST00000582123 288 ntBASIC13.94□□□□□ -0.18
SHROOM3Q8TF72 GAS7-216ENST00000583882 553 ntTSL 5 BASIC13.94□□□□□ -0.18
SHROOM3Q8TF72 SPINT2-204ENST00000587090 1246 ntAPPRIS ALT2 TSL 3 BASIC13.94□□□□□ -0.18
SHROOM3Q8TF72 ZNF677-204ENST00000594681 935 ntTSL 2 BASIC13.94□□□□□ -0.18
SHROOM3Q8TF72 MME-218ENST00000625667 363 ntTSL 5 BASIC13.94□□□□□ -0.18
SHROOM3Q8TF72 EML1-203ENST00000334192 4064 ntTSL 5 BASIC13.94□□□□□ -0.18
SHROOM3Q8TF72 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SHROOM3Q8TF72 AC036108.2-201ENST00000566974 2562 ntTSL 2 BASIC13.94□□□□□ -0.18
SHROOM3Q8TF72 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC13.94□□□□□ -0.18
SHROOM3Q8TF72 AC026271.4-201ENST00000578214 1833 ntBASIC13.94□□□□□ -0.18
SHROOM3Q8TF72 SVOPL-203ENST00000421622 1653 ntTSL 5 BASIC13.94□□□□□ -0.18
SHROOM3Q8TF72 RBM15-204ENST00000617047 3284 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SHROOM3Q8TF72 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
SHROOM3Q8TF72 AC090502.4-201ENST00000551714 1386 ntBASIC13.94□□□□□ -0.18
SHROOM3Q8TF72 DCAF8-201ENST00000326837 3972 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
SHROOM3Q8TF72 SRPRA-201ENST00000332118 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SHROOM3Q8TF72 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SHROOM3Q8TF72 RC3H2-205ENST00000423239 3623 ntTSL 5 BASIC13.93□□□□□ -0.18
SHROOM3Q8TF72 DNAJB8-201ENST00000319153 2465 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SHROOM3Q8TF72 AGAP2-203ENST00000547588 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
SHROOM3Q8TF72 TAGLN3-201ENST00000273368 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SHROOM3Q8TF72 UBTF-209ENST00000529383 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SHROOM3Q8TF72 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC13.93□□□□□ -0.18
SHROOM3Q8TF72 CCER1-201ENST00000358859 2962 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
SHROOM3Q8TF72 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SHROOM3Q8TF72 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SHROOM3Q8TF72 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC13.93□□□□□ -0.18
SHROOM3Q8TF72 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC13.93□□□□□ -0.18
SHROOM3Q8TF72 RBM22P2-201ENST00000393978 1814 ntBASIC13.93□□□□□ -0.18
SHROOM3Q8TF72 POTEB3-201ENST00000611217 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SHROOM3Q8TF72 TNFSF11-201ENST00000239849 911 ntTSL 5 BASIC13.93□□□□□ -0.18
SHROOM3Q8TF72 PCBD1-201ENST00000299299 1006 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SHROOM3Q8TF72 KRTAP1-3-201ENST00000344363 972 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
SHROOM3Q8TF72 AC092265.1-201ENST00000422638 498 ntTSL 2 BASIC13.93□□□□□ -0.18
SHROOM3Q8TF72 AL139241.1-201ENST00000433374 1168 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SHROOM3Q8TF72 AC004540.1-204ENST00000449537 727 ntTSL 2 BASIC13.93□□□□□ -0.18
SHROOM3Q8TF72 IMPA1-203ENST00000449740 1180 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SHROOM3Q8TF72 FABP5P3-202ENST00000477993 1027 ntTSL 5 BASIC13.93□□□□□ -0.18
SHROOM3Q8TF72 AC130709.1-201ENST00000484779 1212 ntBASIC13.93□□□□□ -0.18
SHROOM3Q8TF72 FRMD4A-208ENST00000493380 1149 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SHROOM3Q8TF72 FAM86KP-201ENST00000509817 987 ntBASIC13.93□□□□□ -0.18
SHROOM3Q8TF72 AP003068.3-201ENST00000527789 175 ntTSL 2 BASIC13.93□□□□□ -0.18
SHROOM3Q8TF72 AC012158.2-201ENST00000536546 354 ntBASIC13.93□□□□□ -0.18
SHROOM3Q8TF72 LINC01224-201ENST00000593573 798 ntTSL 4 BASIC13.93□□□□□ -0.18
SHROOM3Q8TF72 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SHROOM3Q8TF72 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
SHROOM3Q8TF72 OSBPL9-201ENST00000361556 2721 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SHROOM3Q8TF72 DEDD-202ENST00000368006 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SHROOM3Q8TF72 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SHROOM3Q8TF72 PPP1R26P2-201ENST00000611403 3595 ntBASIC13.93□□□□□ -0.18
SHROOM3Q8TF72 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
SHROOM3Q8TF72 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
SHROOM3Q8TF72 AL450468.2-201ENST00000565955 1889 ntBASIC13.93□□□□□ -0.18
SHROOM3Q8TF72 RNF220-203ENST00000361799 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SHROOM3Q8TF72 RNF220-204ENST00000372247 3010 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
SHROOM3Q8TF72 AC098936.1-201ENST00000442318 2885 ntTSL 2 BASIC13.93□□□□□ -0.18
SHROOM3Q8TF72 LINC01922-202ENST00000567168 1704 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SHROOM3Q8TF72 LPCAT4-209ENST00000617710 1719 ntTSL 5 BASIC13.93□□□□□ -0.18
SHROOM3Q8TF72 TMEM201-201ENST00000340305 3851 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SHROOM3Q8TF72 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC13.93□□□□□ -0.18
SHROOM3Q8TF72 TMEM177-202ENST00000401466 1346 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
SHROOM3Q8TF72 FCRL1-207ENST00000491942 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
SHROOM3Q8TF72 DUOXA1-205ENST00000558422 1678 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SHROOM3Q8TF72 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms