Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 PIGCP1-201ENST00000527583 895 ntBASIC14.69□□□□□ -0.06
BRCA2P51587 AP003717.2-201ENST00000534962 898 ntBASIC14.69□□□□□ -0.06
BRCA2P51587 AC078880.3-201ENST00000603439 1121 ntBASIC14.69□□□□□ -0.06
BRCA2P51587 Metazoa_SRP.85-201ENST00000610909 260 ntBASIC14.69□□□□□ -0.06
BRCA2P51587 BACH1-AS1-202ENST00000615718 700 ntTSL 5 BASIC14.69□□□□□ -0.06
BRCA2P51587 SMYD5-209ENST00000629411 246 ntTSL 5 BASIC14.69□□□□□ -0.06
BRCA2P51587 LINC01988-202ENST00000636975 921 ntTSL 5 BASIC14.69□□□□□ -0.06
BRCA2P51587 RHPN1-AS1-201ENST00000518049 1918 ntBASIC14.69□□□□□ -0.06
BRCA2P51587 IKZF1-206ENST00000359197 3487 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
BRCA2P51587 ATP6V0A1-206ENST00000585525 2679 ntTSL 2 BASIC14.69□□□□□ -0.06
BRCA2P51587 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC14.69□□□□□ -0.06
BRCA2P51587 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
BRCA2P51587 VRK3-202ENST00000377011 1749 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
BRCA2P51587 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC14.69□□□□□ -0.06
BRCA2P51587 YAE1D1-201ENST00000223273 899 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
BRCA2P51587 LDHAL6FP-201ENST00000405916 1082 ntBASIC14.69□□□□□ -0.06
BRCA2P51587 MED15P7-201ENST00000435410 822 ntBASIC14.69□□□□□ -0.06
BRCA2P51587 AL669831.4-201ENST00000447500 872 ntTSL 5 BASIC14.69□□□□□ -0.06
BRCA2P51587 DMKN-244ENST00000480502 820 ntAPPRIS ALT2 TSL 3 BASIC14.69□□□□□ -0.06
BRCA2P51587 AC023886.1-202ENST00000504009 477 ntTSL 3 BASIC14.69□□□□□ -0.06
BRCA2P51587 ASS1P9-201ENST00000513426 1236 ntBASIC14.69□□□□□ -0.06
BRCA2P51587 RPL38-206ENST00000533498 532 ntAPPRIS P2 TSL 2 BASIC14.69□□□□□ -0.06
BRCA2P51587 AC087190.3-201ENST00000562893 753 ntTSL 3 BASIC14.69□□□□□ -0.06
BRCA2P51587 AC005154.1-204ENST00000580902 926 ntTSL 4 BASIC14.69□□□□□ -0.06
BRCA2P51587 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
BRCA2P51587 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC14.69□□□□□ -0.06
BRCA2P51587 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
BRCA2P51587 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC14.69□□□□□ -0.06
BRCA2P51587 DMBX1-201ENST00000360032 2880 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
BRCA2P51587 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC14.69□□□□□ -0.06
BRCA2P51587 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC14.69□□□□□ -0.06
BRCA2P51587 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC14.69□□□□□ -0.06
BRCA2P51587 PNKD-203ENST00000273077 3021 ntAPPRIS P4 TSL 1 (best) BASIC14.69□□□□□ -0.06
BRCA2P51587 DDX6-202ENST00000526070 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
BRCA2P51587 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
BRCA2P51587 AC090643.2-201ENST00000623442 2029 ntBASIC14.69□□□□□ -0.06
BRCA2P51587 MAP7-205ENST00000544465 2744 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
BRCA2P51587 TOP1MT-213ENST00000521193 1960 ntTSL 2 BASIC14.69□□□□□ -0.06
BRCA2P51587 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
BRCA2P51587 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
BRCA2P51587 EFNA1-201ENST00000368406 1444 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
BRCA2P51587 AC046158.3-201ENST00000624947 2558 ntBASIC14.69□□□□□ -0.06
BRCA2P51587 LINC01763-201ENST00000425185 1547 ntTSL 3 BASIC14.68□□□□□ -0.06
BRCA2P51587 KLKP1-203ENST00000600104 1532 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
BRCA2P51587 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
BRCA2P51587 AL590428.1-201ENST00000428865 1973 ntTSL 2 BASIC14.68□□□□□ -0.06
BRCA2P51587 ZNF595-203ENST00000608255 1999 ntTSL 2 BASIC14.68□□□□□ -0.06
BRCA2P51587 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
BRCA2P51587 SULT1A3-202ENST00000395138 1326 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
BRCA2P51587 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC14.68□□□□□ -0.06
BRCA2P51587 LINC01285-204ENST00000634601 1947 ntTSL 5 BASIC14.68□□□□□ -0.06
BRCA2P51587 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
BRCA2P51587 AL391832.3-201ENST00000549744 846 ntTSL 3 BASIC14.68□□□□□ -0.06
BRCA2P51587 AC013356.4-201ENST00000558421 482 ntTSL 2 BASIC14.68□□□□□ -0.06
BRCA2P51587 AC091489.1-201ENST00000563866 691 ntTSL 3 BASIC14.68□□□□□ -0.06
BRCA2P51587 AFMID-205ENST00000586731 550 ntTSL 3 BASIC14.68□□□□□ -0.06
BRCA2P51587 AL118506.1-201ENST00000601296 3082 ntBASIC14.68□□□□□ -0.06
BRCA2P51587 AC022296.3-201ENST00000608823 403 ntBASIC14.68□□□□□ -0.06
BRCA2P51587 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
BRCA2P51587 CYP20A1-210ENST00000613925 1986 ntTSL 2 BASIC14.68□□□□□ -0.06
BRCA2P51587 CNTNAP2-207ENST00000628930 1944 ntTSL 2 BASIC14.68□□□□□ -0.06
BRCA2P51587 GRIA4-210ENST00000527669 2647 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
BRCA2P51587 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC14.68□□□□□ -0.06
BRCA2P51587 DLL1-201ENST00000366756 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
BRCA2P51587 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
BRCA2P51587 PRY-201ENST00000303728 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
BRCA2P51587 PRY2-201ENST00000303804 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
BRCA2P51587 INO80C-202ENST00000334598 974 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
BRCA2P51587 PRYP3-201ENST00000343584 1063 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
BRCA2P51587 TMEM18-203ENST00000405941 654 ntAPPRIS ALT2 TSL 3 BASIC14.68□□□□□ -0.06
BRCA2P51587 BCRP5-201ENST00000514371 253 ntBASIC14.68□□□□□ -0.06
BRCA2P51587 POU2AF1-201ENST00000393067 3295 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
BRCA2P51587 LINC00910-201ENST00000341011 2303 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
BRCA2P51587 PPATP1-201ENST00000496669 1547 ntBASIC14.68□□□□□ -0.06
BRCA2P51587 XYLT2-201ENST00000017003 3507 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
BRCA2P51587 SERPING1-202ENST00000340687 1719 ntTSL 5 BASIC14.68□□□□□ -0.06
BRCA2P51587 NPL-205ENST00000367555 1536 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
BRCA2P51587 SLURP1-201ENST00000246515 537 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
BRCA2P51587 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
BRCA2P51587 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
BRCA2P51587 NTF3-201ENST00000331010 1028 ntAPPRIS P3 BASIC14.67□□□□□ -0.06
BRCA2P51587 AL358115.1-202ENST00000455257 675 ntTSL 3 BASIC14.67□□□□□ -0.06
BRCA2P51587 AC011773.4-202ENST00000566000 1264 ntBASIC14.67□□□□□ -0.06
BRCA2P51587 AC012615.6-203ENST00000590531 272 ntTSL 2 BASIC14.67□□□□□ -0.06
BRCA2P51587 AC010615.2-201ENST00000596705 566 ntTSL 4 BASIC14.67□□□□□ -0.06
BRCA2P51587 LINC00923-208ENST00000621777 503 ntTSL 5 BASIC14.67□□□□□ -0.06
BRCA2P51587 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC14.67□□□□□ -0.06
BRCA2P51587 LINC01744-201ENST00000457698 2042 ntTSL 2 BASIC14.67□□□□□ -0.06
BRCA2P51587 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
BRCA2P51587 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC14.67□□□□□ -0.06
BRCA2P51587 TPT1-203ENST00000379056 1101 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
BRCA2P51587 AKR1C6P-201ENST00000432950 983 ntBASIC14.67□□□□□ -0.06
BRCA2P51587 AL031773.1-201ENST00000453579 554 ntTSL 3 BASIC14.67□□□□□ -0.06
BRCA2P51587 ZBED3-AS1-206ENST00000508401 582 ntTSL 2 BASIC14.67□□□□□ -0.06
BRCA2P51587 CLNS1A-202ENST00000525064 1121 ntTSL 3 BASIC14.67□□□□□ -0.06
BRCA2P51587 METTL23-211ENST00000589977 617 ntTSL 3 BASIC14.67□□□□□ -0.06
BRCA2P51587 WASHC1-201ENST00000442898 1827 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
BRCA2P51587 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
BRCA2P51587 TAPBP-234ENST00000434618 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
BRCA2P51587 MRFAP1L1-201ENST00000320848 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 61.5 ms