Protein–RNA interactions for Protein: P12644

BMP4, Bone morphogenetic protein 4, humanhuman

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BMP4P12644 HNRNPDL-207ENST00000614627 3968 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
BMP4P12644 AOC3-201ENST00000308423 4026 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
BMP4P12644 OR2C3-204ENST00000641802 8509 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
BMP4P12644 EIF4G1-219ENST00000435046 4668 ntTSL 5 BASIC12.75□□□□□ -0.37
BMP4P12644 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
BMP4P12644 KDM5C-208ENST00000452825 6096 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
BMP4P12644 PRKCG-201ENST00000263431 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
BMP4P12644 SLC45A2-201ENST00000296589 1772 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
BMP4P12644 C12orf76-201ENST00000309050 1964 ntTSL 2 BASIC12.75□□□□□ -0.37
BMP4P12644 CDC20-201ENST00000310955 1675 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
BMP4P12644 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
BMP4P12644 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
BMP4P12644 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
BMP4P12644 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
BMP4P12644 ASAH2B-202ENST00000374007 3715 ntAPPRIS P1 TSL 3 BASIC12.75□□□□□ -0.37
BMP4P12644 ZCCHC6-203ENST00000375948 958 ntTSL 2 BASIC12.75□□□□□ -0.37
BMP4P12644 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
BMP4P12644 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
BMP4P12644 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
BMP4P12644 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
BMP4P12644 LINC01756-201ENST00000417651 2148 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
BMP4P12644 AL355994.1-201ENST00000424379 260 ntBASIC12.75□□□□□ -0.37
BMP4P12644 AK2P2-201ENST00000439142 405 ntBASIC12.75□□□□□ -0.37
BMP4P12644 BX284668.4-201ENST00000453917 508 ntBASIC12.75□□□□□ -0.37
BMP4P12644 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC12.75□□□□□ -0.37
BMP4P12644 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
BMP4P12644 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC12.75□□□□□ -0.37
BMP4P12644 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
BMP4P12644 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC12.75□□□□□ -0.37
BMP4P12644 RERG-205ENST00000537647 935 ntTSL 2 BASIC12.75□□□□□ -0.37
BMP4P12644 RGMA-203ENST00000542321 3038 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
BMP4P12644 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC12.75□□□□□ -0.37
BMP4P12644 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC12.75□□□□□ -0.37
BMP4P12644 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC12.75□□□□□ -0.37
BMP4P12644 AC009712.1-201ENST00000564938 316 ntBASIC12.75□□□□□ -0.37
BMP4P12644 SYT17-208ENST00000568433 812 ntTSL 3 BASIC12.75□□□□□ -0.37
BMP4P12644 JPT2-214ENST00000569765 782 ntTSL 2 BASIC12.75□□□□□ -0.37
BMP4P12644 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC12.75□□□□□ -0.37
BMP4P12644 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
BMP4P12644 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC12.75□□□□□ -0.37
BMP4P12644 KC6-205ENST00000599934 556 ntTSL 4 BASIC12.75□□□□□ -0.37
BMP4P12644 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC12.75□□□□□ -0.37
BMP4P12644 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC12.75□□□□□ -0.37
BMP4P12644 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC12.75□□□□□ -0.37
BMP4P12644 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC12.75□□□□□ -0.37
BMP4P12644 IRS1-201ENST00000305123 9705 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
BMP4P12644 VPS54-203ENST00000409558 4337 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
BMP4P12644 LRRC8C-201ENST00000370454 7218 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
BMP4P12644 ABCB9-201ENST00000280560 3517 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
BMP4P12644 HOTTIP-203ENST00000521028 3345 ntTSL 5 BASIC12.75□□□□□ -0.37
BMP4P12644 TMEM147-AS1-205ENST00000590717 3300 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
BMP4P12644 CACNG3-201ENST00000005284 3088 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
BMP4P12644 SP7-201ENST00000303846 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
BMP4P12644 PLOD2-209ENST00000494950 2908 ntTSL 2 BASIC12.75□□□□□ -0.37
BMP4P12644 EGFR-AS1-201ENST00000442411 2806 ntTSL 2 BASIC12.75□□□□□ -0.37
BMP4P12644 MPP4-203ENST00000396886 2250 ntTSL 2 BASIC12.74□□□□□ -0.37
BMP4P12644 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
BMP4P12644 TNFSF13-203ENST00000380535 2195 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
BMP4P12644 PRKAR1A-203ENST00000392711 4327 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
BMP4P12644 ADCYAP1R1-201ENST00000304166 6487 ntAPPRIS P3 TSL 2 BASIC12.74□□□□□ -0.37
BMP4P12644 LINC00926-202ENST00000502027 2141 ntTSL 2 BASIC12.74□□□□□ -0.37
BMP4P12644 TRAIP-201ENST00000331456 2028 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
BMP4P12644 GLO1-201ENST00000373365 2012 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
BMP4P12644 GOLGA8IP-201ENST00000340249 1899 ntTSL 2 BASIC12.74□□□□□ -0.37
BMP4P12644 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
BMP4P12644 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
BMP4P12644 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
BMP4P12644 SHC1P1-201ENST00000425230 1745 ntBASIC12.74□□□□□ -0.37
BMP4P12644 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC12.74□□□□□ -0.37
BMP4P12644 ELOVL6-201ENST00000302274 3090 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
BMP4P12644 COX7A2L-202ENST00000378669 3056 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
BMP4P12644 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
BMP4P12644 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
BMP4P12644 CA10-202ENST00000442502 2935 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
BMP4P12644 LAMB2-201ENST00000305544 5643 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
BMP4P12644 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
BMP4P12644 DHX58-201ENST00000251642 2617 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
BMP4P12644 SETD3-204ENST00000436070 2592 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
BMP4P12644 AOC2-202ENST00000452774 2572 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
BMP4P12644 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
BMP4P12644 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
BMP4P12644 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
BMP4P12644 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
BMP4P12644 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC12.74□□□□□ -0.37
BMP4P12644 RN7SKP175-201ENST00000408472 289 ntBASIC12.74□□□□□ -0.37
BMP4P12644 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC12.74□□□□□ -0.37
BMP4P12644 AC004672.2-201ENST00000537181 574 ntTSL 2 BASIC12.74□□□□□ -0.37
BMP4P12644 RNF41-210ENST00000552244 716 ntTSL 3 BASIC12.74□□□□□ -0.37
BMP4P12644 IGHV3OR16-16-201ENST00000563644 343 ntBASIC12.74□□□□□ -0.37
BMP4P12644 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC12.74□□□□□ -0.37
BMP4P12644 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
BMP4P12644 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
BMP4P12644 AC108673.2-201ENST00000608909 565 ntBASIC12.74□□□□□ -0.37
BMP4P12644 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC12.74□□□□□ -0.37
BMP4P12644 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
BMP4P12644 SNX12-206ENST00000622259 661 ntTSL 5 BASIC12.74□□□□□ -0.37
BMP4P12644 FBLN1-208ENST00000442170 2531 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
BMP4P12644 SRGAP3-201ENST00000360413 8415 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
BMP4P12644 RANBP17-219ENST00000523189 4588 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
BMP4P12644 CLINT1-201ENST00000411809 3440 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 135.9 ms