Protein–RNA interactions for Protein: Q9Y5F0

PCDHB13, Protocadherin beta-13, humanhuman

Predictions only

Length 798 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13Q9Y5F0 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
PCDHB13Q9Y5F0 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
PCDHB13Q9Y5F0 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC15.56■□□□□ 0.08
PCDHB13Q9Y5F0 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
PCDHB13Q9Y5F0 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PCDHB13Q9Y5F0 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PCDHB13Q9Y5F0 Y_RNA.110-201ENST00000363220 99 ntBASIC15.56■□□□□ 0.08
PCDHB13Q9Y5F0 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC15.56■□□□□ 0.08
PCDHB13Q9Y5F0 PARVG-202ENST00000415224 999 ntTSL 2 BASIC15.56■□□□□ 0.08
PCDHB13Q9Y5F0 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC15.56■□□□□ 0.08
PCDHB13Q9Y5F0 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC15.56■□□□□ 0.08
PCDHB13Q9Y5F0 MSRA-203ENST00000441698 788 ntTSL 2 BASIC15.56■□□□□ 0.08
PCDHB13Q9Y5F0 RPSAP15-201ENST00000448168 861 ntBASIC15.56■□□□□ 0.08
PCDHB13Q9Y5F0 AC073150.1-201ENST00000450406 1084 ntBASIC15.56■□□□□ 0.08
PCDHB13Q9Y5F0 AL353637.1-201ENST00000451571 732 ntBASIC15.56■□□□□ 0.08
PCDHB13Q9Y5F0 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC15.56■□□□□ 0.08
PCDHB13Q9Y5F0 RN7SL258P-201ENST00000478664 300 ntBASIC15.56■□□□□ 0.08
PCDHB13Q9Y5F0 BOLA3P3-201ENST00000505182 232 ntBASIC15.56■□□□□ 0.08
PCDHB13Q9Y5F0 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC15.56■□□□□ 0.08
PCDHB13Q9Y5F0 AC104123.1-203ENST00000513158 575 ntTSL 3 BASIC15.56■□□□□ 0.08
PCDHB13Q9Y5F0 SCARNA1-201ENST00000517138 166 ntBASIC15.56■□□□□ 0.08
PCDHB13Q9Y5F0 AC090152.1-203ENST00000517898 1106 ntTSL 2 BASIC15.56■□□□□ 0.08
PCDHB13Q9Y5F0 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC15.56■□□□□ 0.08
PCDHB13Q9Y5F0 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC15.56■□□□□ 0.08
PCDHB13Q9Y5F0 RN7SL455P-201ENST00000580629 282 ntBASIC15.56■□□□□ 0.08
PCDHB13Q9Y5F0 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC15.56■□□□□ 0.08
PCDHB13Q9Y5F0 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC15.56■□□□□ 0.08
PCDHB13Q9Y5F0 C2-AS1-201ENST00000630806 762 ntTSL 2 BASIC15.56■□□□□ 0.08
PCDHB13Q9Y5F0 AP003399.1-201ENST00000637534 361 ntBASIC15.56■□□□□ 0.08
PCDHB13Q9Y5F0 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
PCDHB13Q9Y5F0 KRT18P9-201ENST00000604826 1300 ntBASIC15.56■□□□□ 0.08
PCDHB13Q9Y5F0 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
PCDHB13Q9Y5F0 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC15.56■□□□□ 0.08
PCDHB13Q9Y5F0 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
PCDHB13Q9Y5F0 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
PCDHB13Q9Y5F0 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC15.56■□□□□ 0.08
PCDHB13Q9Y5F0 AC015909.5-201ENST00000624336 2266 ntBASIC15.56■□□□□ 0.08
PCDHB13Q9Y5F0 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PCDHB13Q9Y5F0 AC073869.1-201ENST00000415574 2762 ntBASIC15.56■□□□□ 0.08
PCDHB13Q9Y5F0 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
PCDHB13Q9Y5F0 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PCDHB13Q9Y5F0 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC15.56■□□□□ 0.08
PCDHB13Q9Y5F0 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
PCDHB13Q9Y5F0 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
PCDHB13Q9Y5F0 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC15.56■□□□□ 0.08
PCDHB13Q9Y5F0 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PCDHB13Q9Y5F0 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC15.56■□□□□ 0.08
PCDHB13Q9Y5F0 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PCDHB13Q9Y5F0 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PCDHB13Q9Y5F0 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
PCDHB13Q9Y5F0 CETP-201ENST00000200676 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PCDHB13Q9Y5F0 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PCDHB13Q9Y5F0 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC15.55■□□□□ 0.08
PCDHB13Q9Y5F0 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PCDHB13Q9Y5F0 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC15.55■□□□□ 0.08
PCDHB13Q9Y5F0 PRL-201ENST00000306482 1354 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PCDHB13Q9Y5F0 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PCDHB13Q9Y5F0 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
PCDHB13Q9Y5F0 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC15.55■□□□□ 0.08
PCDHB13Q9Y5F0 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC15.55■□□□□ 0.08
PCDHB13Q9Y5F0 AC026320.2-201ENST00000434379 478 ntBASIC15.55■□□□□ 0.08
PCDHB13Q9Y5F0 AL139220.1-201ENST00000436802 520 ntBASIC15.55■□□□□ 0.08
PCDHB13Q9Y5F0 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PCDHB13Q9Y5F0 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC15.55■□□□□ 0.08
PCDHB13Q9Y5F0 AC114947.1-202ENST00000514136 344 ntBASIC15.55■□□□□ 0.08
PCDHB13Q9Y5F0 Metazoa_SRP.26-201ENST00000547793 284 ntBASIC15.55■□□□□ 0.08
PCDHB13Q9Y5F0 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC15.55■□□□□ 0.08
PCDHB13Q9Y5F0 AC018362.2-202ENST00000567089 562 ntTSL 3 BASIC15.55■□□□□ 0.08
PCDHB13Q9Y5F0 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC15.55■□□□□ 0.08
PCDHB13Q9Y5F0 MIR3619-201ENST00000579667 83 ntBASIC15.55■□□□□ 0.08
PCDHB13Q9Y5F0 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
PCDHB13Q9Y5F0 OR13Z2P-201ENST00000606338 555 ntBASIC15.55■□□□□ 0.08
PCDHB13Q9Y5F0 AC016747.2-203ENST00000606876 289 ntTSL 3 BASIC15.55■□□□□ 0.08
PCDHB13Q9Y5F0 AP001505.2-201ENST00000616815 443 ntBASIC15.55■□□□□ 0.08
PCDHB13Q9Y5F0 AC005609.5-201ENST00000624712 1053 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PCDHB13Q9Y5F0 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC15.55■□□□□ 0.08
PCDHB13Q9Y5F0 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC15.55■□□□□ 0.08
PCDHB13Q9Y5F0 PEG13-201ENST00000631594 5667 ntBASIC15.55■□□□□ 0.08
PCDHB13Q9Y5F0 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC15.55■□□□□ 0.08
PCDHB13Q9Y5F0 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PCDHB13Q9Y5F0 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC15.55■□□□□ 0.08
PCDHB13Q9Y5F0 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PCDHB13Q9Y5F0 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC15.55■□□□□ 0.08
PCDHB13Q9Y5F0 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC15.55■□□□□ 0.08
PCDHB13Q9Y5F0 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PCDHB13Q9Y5F0 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PCDHB13Q9Y5F0 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PCDHB13Q9Y5F0 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PCDHB13Q9Y5F0 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC15.55■□□□□ 0.08
PCDHB13Q9Y5F0 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC15.55■□□□□ 0.08
PCDHB13Q9Y5F0 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PCDHB13Q9Y5F0 ARHGAP23P1-201ENST00000562773 1937 ntBASIC15.55■□□□□ 0.08
PCDHB13Q9Y5F0 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
PCDHB13Q9Y5F0 DSTN-203ENST00000474024 1853 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PCDHB13Q9Y5F0 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC15.54■□□□□ 0.08
PCDHB13Q9Y5F0 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC15.54■□□□□ 0.08
PCDHB13Q9Y5F0 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
PCDHB13Q9Y5F0 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PCDHB13Q9Y5F0 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PCDHB13Q9Y5F0 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC15.54■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms