Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM47Q96LD4 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM47Q96LD4 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM47Q96LD4 AC111170.3-201ENST00000624282 2464 ntBASIC16.11■□□□□ 0.17
TRIM47Q96LD4 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
TRIM47Q96LD4 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM47Q96LD4 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM47Q96LD4 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC16.11■□□□□ 0.17
TRIM47Q96LD4 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
TRIM47Q96LD4 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM47Q96LD4 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM47Q96LD4 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
TRIM47Q96LD4 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM47Q96LD4 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM47Q96LD4 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM47Q96LD4 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM47Q96LD4 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
TRIM47Q96LD4 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
TRIM47Q96LD4 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
TRIM47Q96LD4 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM47Q96LD4 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM47Q96LD4 PEG13-201ENST00000631594 5667 ntBASIC16.11■□□□□ 0.17
TRIM47Q96LD4 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM47Q96LD4 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM47Q96LD4 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM47Q96LD4 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC16.11■□□□□ 0.17
TRIM47Q96LD4 HIST1H2BK-201ENST00000356950 381 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
TRIM47Q96LD4 PLA2G12B-201ENST00000373032 1128 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM47Q96LD4 TREM2-202ENST00000373113 1044 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM47Q96LD4 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC16.11■□□□□ 0.17
TRIM47Q96LD4 TRBV5-7-201ENST00000390378 343 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
TRIM47Q96LD4 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM47Q96LD4 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM47Q96LD4 IFNWP2-201ENST00000431203 580 ntBASIC16.11■□□□□ 0.17
TRIM47Q96LD4 CDCA4P4-201ENST00000435216 680 ntBASIC16.11■□□□□ 0.17
TRIM47Q96LD4 NRADDP-201ENST00000437305 691 ntBASIC16.11■□□□□ 0.17
TRIM47Q96LD4 CU639417.1-201ENST00000464664 460 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
TRIM47Q96LD4 EXTL3-AS1-203ENST00000520023 780 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM47Q96LD4 C11orf58-207ENST00000525684 575 ntTSL 2 BASIC16.11■□□□□ 0.17
TRIM47Q96LD4 C11orf58-209ENST00000528634 776 ntTSL 5 BASIC16.11■□□□□ 0.17
TRIM47Q96LD4 TPP1-209ENST00000528657 578 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM47Q96LD4 RBM4-211ENST00000530235 1011 ntTSL 3 BASIC16.11■□□□□ 0.17
TRIM47Q96LD4 RPL18-205ENST00000549273 1036 ntTSL 2 BASIC16.11■□□□□ 0.17
TRIM47Q96LD4 AF111169.3-201ENST00000553991 756 ntTSL 5 BASIC16.11■□□□□ 0.17
TRIM47Q96LD4 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC16.11■□□□□ 0.17
TRIM47Q96LD4 FBXO36P1-201ENST00000579006 471 ntBASIC16.11■□□□□ 0.17
TRIM47Q96LD4 AC005777.1-201ENST00000588332 187 ntBASIC16.11■□□□□ 0.17
TRIM47Q96LD4 TYMSP2-201ENST00000589501 424 ntBASIC16.11■□□□□ 0.17
TRIM47Q96LD4 FAAP24-203ENST00000589646 836 ntTSL 3 BASIC16.11■□□□□ 0.17
TRIM47Q96LD4 SMAD7-208ENST00000591805 1152 ntTSL 2 BASIC16.11■□□□□ 0.17
TRIM47Q96LD4 AC023090.1-201ENST00000592906 502 ntTSL 3 BASIC16.11■□□□□ 0.17
TRIM47Q96LD4 H2BFS-201ENST00000599962 460 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
TRIM47Q96LD4 LINC01082-201ENST00000601250 441 ntTSL 2 BASIC16.11■□□□□ 0.17
TRIM47Q96LD4 C1orf232-202ENST00000635463 466 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
TRIM47Q96LD4 AC023794.5-201ENST00000564380 2157 ntBASIC16.11■□□□□ 0.17
TRIM47Q96LD4 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM47Q96LD4 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC16.11■□□□□ 0.17
TRIM47Q96LD4 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM47Q96LD4 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM47Q96LD4 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC16.11■□□□□ 0.17
TRIM47Q96LD4 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM47Q96LD4 WASH7P-201ENST00000488147 1351 ntBASIC16.11■□□□□ 0.17
TRIM47Q96LD4 PAX6-264ENST00000640125 1375 ntTSL 5 BASIC16.11■□□□□ 0.17
TRIM47Q96LD4 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
TRIM47Q96LD4 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM47Q96LD4 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM47Q96LD4 AC062028.1-201ENST00000536743 1422 ntTSL 5 BASIC16.11■□□□□ 0.17
TRIM47Q96LD4 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
TRIM47Q96LD4 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
TRIM47Q96LD4 KCTD6-205ENST00000490264 1759 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
TRIM47Q96LD4 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
TRIM47Q96LD4 VDAC2-202ENST00000313132 1467 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TRIM47Q96LD4 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRIM47Q96LD4 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC16.1■□□□□ 0.17
TRIM47Q96LD4 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC16.1■□□□□ 0.17
TRIM47Q96LD4 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TRIM47Q96LD4 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
TRIM47Q96LD4 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRIM47Q96LD4 UBE2L5P-202ENST00000635918 1513 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
TRIM47Q96LD4 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC16.1■□□□□ 0.17
TRIM47Q96LD4 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC16.1■□□□□ 0.17
TRIM47Q96LD4 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRIM47Q96LD4 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC16.1■□□□□ 0.17
TRIM47Q96LD4 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TRIM47Q96LD4 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC16.1■□□□□ 0.17
TRIM47Q96LD4 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRIM47Q96LD4 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
TRIM47Q96LD4 ODF3L1-201ENST00000332145 1196 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRIM47Q96LD4 FAM163B-201ENST00000356873 1131 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRIM47Q96LD4 NDUFB6-202ENST00000366466 761 ntTSL 2 BASIC16.1■□□□□ 0.17
TRIM47Q96LD4 ATP5J-202ENST00000400087 826 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
TRIM47Q96LD4 RPL3P2-204ENST00000413027 1203 ntBASIC16.1■□□□□ 0.17
TRIM47Q96LD4 AL356218.1-201ENST00000450864 353 ntTSL 3 BASIC16.1■□□□□ 0.17
TRIM47Q96LD4 RPS18P9-201ENST00000482817 460 ntBASIC16.1■□□□□ 0.17
TRIM47Q96LD4 SLC25A15P3-201ENST00000505530 290 ntBASIC16.1■□□□□ 0.17
TRIM47Q96LD4 CMC2-204ENST00000562713 573 ntTSL 3 BASIC16.1■□□□□ 0.17
TRIM47Q96LD4 CMC2-209ENST00000565108 399 ntTSL 2 BASIC16.1■□□□□ 0.17
TRIM47Q96LD4 RBFOX3-206ENST00000582043 1143 ntTSL 5 BASIC16.1■□□□□ 0.17
TRIM47Q96LD4 AC016586.1-201ENST00000600056 684 ntTSL 3 BASIC16.1■□□□□ 0.17
TRIM47Q96LD4 AC073869.4-201ENST00000620841 800 ntBASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 72.6 ms