Protein–RNA interactions for Protein: P36406

TRIM23, E3 ubiquitin-protein ligase TRIM23, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23P36406 RHOC-207ENST00000369638 1028 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
TRIM23P36406 ZNRD1-203ENST00000376782 736 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
TRIM23P36406 AC093673.1-201ENST00000429630 648 ntTSL 2 BASIC13.51□□□□□ -0.25
TRIM23P36406 AL390961.2-201ENST00000454991 472 ntTSL 3 BASIC13.51□□□□□ -0.25
TRIM23P36406 RN7SL128P-201ENST00000467883 305 ntBASIC13.51□□□□□ -0.25
TRIM23P36406 SAA2-206ENST00000530400 323 ntTSL 3 BASIC13.51□□□□□ -0.25
TRIM23P36406 RNASEK-204ENST00000552039 591 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
TRIM23P36406 AL359219.1-201ENST00000556311 934 ntBASIC13.51□□□□□ -0.25
TRIM23P36406 C17orf62-216ENST00000578919 841 ntAPPRIS P1 TSL 3 BASIC13.51□□□□□ -0.25
TRIM23P36406 NMRK2-202ENST00000593949 869 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRIM23P36406 SCGB1B2P-201ENST00000595013 612 ntTSL 2 BASIC13.51□□□□□ -0.25
TRIM23P36406 NMRK2-204ENST00000599576 691 ntTSL 3 BASIC13.51□□□□□ -0.25
TRIM23P36406 AC090004.1-201ENST00000608606 653 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
TRIM23P36406 Metazoa_SRP.83-201ENST00000611762 320 ntBASIC13.51□□□□□ -0.25
TRIM23P36406 Metazoa_SRP.37-201ENST00000617743 320 ntBASIC13.51□□□□□ -0.25
TRIM23P36406 AC126755.5-201ENST00000622756 267 ntBASIC13.51□□□□□ -0.25
TRIM23P36406 LINC00969-321ENST00000629990 806 ntTSL 5 BASIC13.51□□□□□ -0.25
TRIM23P36406 TTC23L-209ENST00000638320 1185 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
TRIM23P36406 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC13.51□□□□□ -0.25
TRIM23P36406 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRIM23P36406 CCDC178-201ENST00000300227 3087 ntAPPRIS P3 TSL 2 BASIC13.51□□□□□ -0.25
TRIM23P36406 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRIM23P36406 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC13.51□□□□□ -0.25
TRIM23P36406 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRIM23P36406 STK3-218ENST00000617590 2485 ntTSL 5 BASIC13.51□□□□□ -0.25
TRIM23P36406 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC13.51□□□□□ -0.25
TRIM23P36406 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
TRIM23P36406 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC13.51□□□□□ -0.25
TRIM23P36406 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC13.51□□□□□ -0.25
TRIM23P36406 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
TRIM23P36406 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
TRIM23P36406 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
TRIM23P36406 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
TRIM23P36406 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC13.51□□□□□ -0.25
TRIM23P36406 CNOT7-211ENST00000523917 1885 ntTSL 2 BASIC13.5□□□□□ -0.25
TRIM23P36406 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRIM23P36406 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC13.5□□□□□ -0.25
TRIM23P36406 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRIM23P36406 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC13.5□□□□□ -0.25
TRIM23P36406 CASP8-212ENST00000432109 1629 ntAPPRIS P4 TSL 5 BASIC13.5□□□□□ -0.25
TRIM23P36406 OXSM-201ENST00000280701 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRIM23P36406 COQ4-201ENST00000300452 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRIM23P36406 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
TRIM23P36406 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
TRIM23P36406 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRIM23P36406 FAM90A12P-201ENST00000519497 2375 ntBASIC13.5□□□□□ -0.25
TRIM23P36406 FAM90A24P-201ENST00000520792 2369 ntBASIC13.5□□□□□ -0.25
TRIM23P36406 ALG11-203ENST00000523764 1404 ntTSL 2 BASIC13.5□□□□□ -0.25
TRIM23P36406 FAM90A21P-201ENST00000510875 1396 ntBASIC13.5□□□□□ -0.25
TRIM23P36406 FAM90A15P-201ENST00000514465 1395 ntBASIC13.5□□□□□ -0.25
TRIM23P36406 FAM90A6P-201ENST00000515148 1394 ntBASIC13.5□□□□□ -0.25
TRIM23P36406 FAM90A16P-201ENST00000526662 1395 ntBASIC13.5□□□□□ -0.25
TRIM23P36406 FAM90A9P-201ENST00000527940 1395 ntBASIC13.5□□□□□ -0.25
TRIM23P36406 FAM90A5P-201ENST00000528738 1395 ntBASIC13.5□□□□□ -0.25
TRIM23P36406 FAM90A14P-201ENST00000530386 1395 ntBASIC13.5□□□□□ -0.25
TRIM23P36406 FAM90A13P-201ENST00000534703 1395 ntBASIC13.5□□□□□ -0.25
TRIM23P36406 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRIM23P36406 FAM69C-202ENST00000400291 1329 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
TRIM23P36406 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC13.5□□□□□ -0.25
TRIM23P36406 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRIM23P36406 KCNK18-201ENST00000334549 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRIM23P36406 AC016757.1-202ENST00000409376 892 ntTSL 3 BASIC13.5□□□□□ -0.25
TRIM23P36406 EVA1A-204ENST00000410071 777 ntAPPRIS P2 TSL 3 BASIC13.5□□□□□ -0.25
TRIM23P36406 RPL15-205ENST00000415719 830 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
TRIM23P36406 AL365500.1-201ENST00000442783 868 ntTSL 3 BASIC13.5□□□□□ -0.25
TRIM23P36406 AC007319.1-201ENST00000453517 802 ntTSL 3 BASIC13.5□□□□□ -0.25
TRIM23P36406 TNNT2-214ENST00000458432 1182 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
TRIM23P36406 AC104212.2-201ENST00000478813 628 ntBASIC13.5□□□□□ -0.25
TRIM23P36406 TREHP1-201ENST00000531328 465 ntBASIC13.5□□□□□ -0.25
TRIM23P36406 C12orf57-204ENST00000540506 551 ntTSL 2 BASIC13.5□□□□□ -0.25
TRIM23P36406 PIGT-208ENST00000545755 1158 ntTSL 5 BASIC13.5□□□□□ -0.25
TRIM23P36406 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC13.5□□□□□ -0.25
TRIM23P36406 AC141586.1-203ENST00000567242 366 ntBASIC13.5□□□□□ -0.25
TRIM23P36406 SLC27A5-204ENST00000594786 643 ntTSL 2 BASIC13.5□□□□□ -0.25
TRIM23P36406 RNF103-CHMP3-202ENST00000604011 1135 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
TRIM23P36406 AC073578.2-201ENST00000618927 464 ntTSL 4 BASIC13.5□□□□□ -0.25
TRIM23P36406 Metazoa_SRP.200-201ENST00000622073 282 ntBASIC13.5□□□□□ -0.25
TRIM23P36406 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC13.5□□□□□ -0.25
TRIM23P36406 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC13.5□□□□□ -0.25
TRIM23P36406 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRIM23P36406 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRIM23P36406 C1QTNF1-204ENST00000392445 2833 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
TRIM23P36406 NCLP1-201ENST00000445357 1963 ntBASIC13.5□□□□□ -0.25
TRIM23P36406 SRC-202ENST00000373558 4304 ntTSL 5 BASIC13.5□□□□□ -0.25
TRIM23P36406 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRIM23P36406 IRS1-201ENST00000305123 9705 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRIM23P36406 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRIM23P36406 HAL-202ENST00000538703 2637 ntTSL 2 BASIC13.5□□□□□ -0.25
TRIM23P36406 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRIM23P36406 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRIM23P36406 LINC00638-201ENST00000555578 2518 ntBASIC13.5□□□□□ -0.25
TRIM23P36406 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRIM23P36406 ZNF493-208ENST00000599461 1769 ntBASIC13.5□□□□□ -0.25
TRIM23P36406 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRIM23P36406 Z82195.2-202ENST00000458525 1646 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
TRIM23P36406 SPOCK3-218ENST00000511531 2908 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
TRIM23P36406 MANEA-AS1-201ENST00000564541 2268 ntBASIC13.5□□□□□ -0.25
TRIM23P36406 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRIM23P36406 ABI2-213ENST00000424558 2240 ntTSL 2 BASIC13.49□□□□□ -0.25
TRIM23P36406 SLC43A3-214ENST00000529554 2207 ntAPPRIS P3 TSL 2 BASIC13.49□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms