Protein–RNA interactions for Protein: Q9Y5S2

CDC42BPB, Serine/threonine-protein kinase MRCK beta, humanhuman

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPBQ9Y5S2 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC34.32■■■■□ 3.09
CDC42BPBQ9Y5S2 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC34.32■■■■□ 3.08
CDC42BPBQ9Y5S2 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC34.32■■■■□ 3.08
CDC42BPBQ9Y5S2 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC34.32■■■■□ 3.08
CDC42BPBQ9Y5S2 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC34.32■■■■□ 3.08
CDC42BPBQ9Y5S2 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC34.32■■■■□ 3.08
CDC42BPBQ9Y5S2 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC34.31■■■■□ 3.08
CDC42BPBQ9Y5S2 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC34.31■■■■□ 3.08
CDC42BPBQ9Y5S2 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC34.31■■■■□ 3.08
CDC42BPBQ9Y5S2 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC34.31■■■■□ 3.08
CDC42BPBQ9Y5S2 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC34.31■■■■□ 3.08
CDC42BPBQ9Y5S2 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC34.31■■■■□ 3.08
CDC42BPBQ9Y5S2 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC34.31■■■■□ 3.08
CDC42BPBQ9Y5S2 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC34.31■■■■□ 3.08
CDC42BPBQ9Y5S2 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC34.3■■■■□ 3.08
CDC42BPBQ9Y5S2 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC34.3■■■■□ 3.08
CDC42BPBQ9Y5S2 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC34.3■■■■□ 3.08
CDC42BPBQ9Y5S2 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC34.3■■■■□ 3.08
CDC42BPBQ9Y5S2 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC34.3■■■■□ 3.08
CDC42BPBQ9Y5S2 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC34.3■■■■□ 3.08
CDC42BPBQ9Y5S2 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC34.3■■■■□ 3.08
CDC42BPBQ9Y5S2 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC34.3■■■■□ 3.08
CDC42BPBQ9Y5S2 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC34.3■■■■□ 3.08
CDC42BPBQ9Y5S2 HLA-L-209ENST00000420110 1011 ntBASIC34.3■■■■□ 3.08
CDC42BPBQ9Y5S2 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC34.29■■■■□ 3.08
CDC42BPBQ9Y5S2 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC34.29■■■■□ 3.08
CDC42BPBQ9Y5S2 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC34.29■■■■□ 3.08
CDC42BPBQ9Y5S2 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC34.29■■■■□ 3.08
CDC42BPBQ9Y5S2 GXYLT1P2-201ENST00000433312 1230 ntBASIC34.29■■■■□ 3.08
CDC42BPBQ9Y5S2 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC34.29■■■■□ 3.08
CDC42BPBQ9Y5S2 NTF6G-201ENST00000591094 616 ntBASIC34.29■■■■□ 3.08
CDC42BPBQ9Y5S2 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC34.28■■■■□ 3.08
CDC42BPBQ9Y5S2 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC34.28■■■■□ 3.08
CDC42BPBQ9Y5S2 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC34.28■■■■□ 3.08
CDC42BPBQ9Y5S2 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC34.28■■■■□ 3.08
CDC42BPBQ9Y5S2 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC34.27■■■■□ 3.08
CDC42BPBQ9Y5S2 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC34.27■■■■□ 3.08
CDC42BPBQ9Y5S2 AP005435.1-201ENST00000529293 1178 ntBASIC34.27■■■■□ 3.08
CDC42BPBQ9Y5S2 DUX4L4-201ENST00000566884 1269 ntBASIC34.27■■■■□ 3.08
CDC42BPBQ9Y5S2 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC34.27■■■■□ 3.08
CDC42BPBQ9Y5S2 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC34.27■■■■□ 3.08
CDC42BPBQ9Y5S2 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC34.27■■■■□ 3.08
CDC42BPBQ9Y5S2 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC34.27■■■■□ 3.08
CDC42BPBQ9Y5S2 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC34.27■■■■□ 3.08
CDC42BPBQ9Y5S2 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC34.26■■■■□ 3.08
CDC42BPBQ9Y5S2 MPST-204ENST00000404393 1329 ntTSL 5 BASIC34.26■■■■□ 3.08
CDC42BPBQ9Y5S2 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC34.26■■■■□ 3.07
CDC42BPBQ9Y5S2 AC006015.1-201ENST00000429970 570 ntBASIC34.26■■■■□ 3.07
CDC42BPBQ9Y5S2 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC34.26■■■■□ 3.07
CDC42BPBQ9Y5S2 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC34.26■■■■□ 3.07
CDC42BPBQ9Y5S2 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC34.26■■■■□ 3.07
CDC42BPBQ9Y5S2 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC34.25■■■■□ 3.07
CDC42BPBQ9Y5S2 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC34.25■■■■□ 3.07
CDC42BPBQ9Y5S2 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC34.25■■■■□ 3.07
CDC42BPBQ9Y5S2 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC34.25■■■■□ 3.07
CDC42BPBQ9Y5S2 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC34.25■■■■□ 3.07
CDC42BPBQ9Y5S2 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC34.25■■■■□ 3.07
CDC42BPBQ9Y5S2 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC34.24■■■■□ 3.07
CDC42BPBQ9Y5S2 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC34.24■■■■□ 3.07
CDC42BPBQ9Y5S2 EI24-213ENST00000618552 1747 ntTSL 5 BASIC34.24■■■■□ 3.07
CDC42BPBQ9Y5S2 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC34.24■■■■□ 3.07
CDC42BPBQ9Y5S2 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC34.24■■■■□ 3.07
CDC42BPBQ9Y5S2 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC34.24■■■■□ 3.07
CDC42BPBQ9Y5S2 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC34.24■■■■□ 3.07
CDC42BPBQ9Y5S2 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC34.24■■■■□ 3.07
CDC42BPBQ9Y5S2 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC34.24■■■■□ 3.07
CDC42BPBQ9Y5S2 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC34.24■■■■□ 3.07
CDC42BPBQ9Y5S2 FP325331.1-202ENST00000623531 1380 ntBASIC34.23■■■■□ 3.07
CDC42BPBQ9Y5S2 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC34.23■■■■□ 3.07
CDC42BPBQ9Y5S2 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC34.22■■■■□ 3.07
CDC42BPBQ9Y5S2 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC34.22■■■■□ 3.07
CDC42BPBQ9Y5S2 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC34.22■■■■□ 3.07
CDC42BPBQ9Y5S2 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC34.22■■■■□ 3.07
CDC42BPBQ9Y5S2 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC34.22■■■■□ 3.07
CDC42BPBQ9Y5S2 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC34.22■■■■□ 3.07
CDC42BPBQ9Y5S2 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC34.21■■■■□ 3.07
CDC42BPBQ9Y5S2 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC34.21■■■■□ 3.07
CDC42BPBQ9Y5S2 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC34.21■■■■□ 3.07
CDC42BPBQ9Y5S2 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC34.21■■■■□ 3.07
CDC42BPBQ9Y5S2 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC34.21■■■■□ 3.07
CDC42BPBQ9Y5S2 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC34.21■■■■□ 3.07
CDC42BPBQ9Y5S2 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC34.21■■■■□ 3.07
CDC42BPBQ9Y5S2 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC34.21■■■■□ 3.07
CDC42BPBQ9Y5S2 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC34.21■■■■□ 3.07
CDC42BPBQ9Y5S2 AC073111.5-205ENST00000641717 521 ntBASIC34.21■■■■□ 3.07
CDC42BPBQ9Y5S2 AC144652.1-201ENST00000609974 1624 ntBASIC34.2■■■■□ 3.07
CDC42BPBQ9Y5S2 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC34.2■■■■□ 3.07
CDC42BPBQ9Y5S2 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC34.2■■■■□ 3.07
CDC42BPBQ9Y5S2 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC34.2■■■■□ 3.07
CDC42BPBQ9Y5S2 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC34.2■■■■□ 3.07
CDC42BPBQ9Y5S2 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC34.2■■■■□ 3.06
CDC42BPBQ9Y5S2 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC34.19■■■■□ 3.06
CDC42BPBQ9Y5S2 LINC02228-203ENST00000641970 1355 ntBASIC34.19■■■■□ 3.06
CDC42BPBQ9Y5S2 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC34.19■■■■□ 3.06
CDC42BPBQ9Y5S2 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC34.19■■■■□ 3.06
CDC42BPBQ9Y5S2 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC34.19■■■■□ 3.06
CDC42BPBQ9Y5S2 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC34.19■■■■□ 3.06
CDC42BPBQ9Y5S2 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC34.19■■■■□ 3.06
CDC42BPBQ9Y5S2 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC34.18■■■■□ 3.06
CDC42BPBQ9Y5S2 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC34.18■■■■□ 3.06
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms