Protein–RNA interactions for Protein: Q9Y2R2

PTPN22, Tyrosine-protein phosphatase non-receptor type 22, humanhuman

Predictions only

Length 807 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22Q9Y2R2 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC25.74■■□□□ 1.71
PTPN22Q9Y2R2 TSPY20P-201ENST00000450910 630 ntBASIC25.74■■□□□ 1.71
PTPN22Q9Y2R2 DBI-210ENST00000542275 757 ntTSL 5 BASIC25.74■■□□□ 1.71
PTPN22Q9Y2R2 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC25.74■■□□□ 1.71
PTPN22Q9Y2R2 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
PTPN22Q9Y2R2 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC25.73■■□□□ 1.71
PTPN22Q9Y2R2 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
PTPN22Q9Y2R2 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC25.73■■□□□ 1.71
PTPN22Q9Y2R2 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC25.73■■□□□ 1.71
PTPN22Q9Y2R2 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
PTPN22Q9Y2R2 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC25.73■■□□□ 1.71
PTPN22Q9Y2R2 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC25.73■■□□□ 1.71
PTPN22Q9Y2R2 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC25.73■■□□□ 1.71
PTPN22Q9Y2R2 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
PTPN22Q9Y2R2 AC141586.4-201ENST00000624558 1573 ntBASIC25.73■■□□□ 1.71
PTPN22Q9Y2R2 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC25.73■■□□□ 1.71
PTPN22Q9Y2R2 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
PTPN22Q9Y2R2 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
PTPN22Q9Y2R2 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC25.72■■□□□ 1.71
PTPN22Q9Y2R2 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
PTPN22Q9Y2R2 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
PTPN22Q9Y2R2 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC25.72■■□□□ 1.71
PTPN22Q9Y2R2 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC25.72■■□□□ 1.71
PTPN22Q9Y2R2 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC25.72■■□□□ 1.71
PTPN22Q9Y2R2 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
PTPN22Q9Y2R2 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC25.72■■□□□ 1.71
PTPN22Q9Y2R2 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
PTPN22Q9Y2R2 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
PTPN22Q9Y2R2 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC25.71■■□□□ 1.71
PTPN22Q9Y2R2 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC25.71■■□□□ 1.71
PTPN22Q9Y2R2 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
PTPN22Q9Y2R2 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
PTPN22Q9Y2R2 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
PTPN22Q9Y2R2 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
PTPN22Q9Y2R2 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC25.71■■□□□ 1.71
PTPN22Q9Y2R2 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
PTPN22Q9Y2R2 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC25.71■■□□□ 1.71
PTPN22Q9Y2R2 AL499627.2-201ENST00000606283 725 ntBASIC25.71■■□□□ 1.71
PTPN22Q9Y2R2 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC25.71■■□□□ 1.71
PTPN22Q9Y2R2 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
PTPN22Q9Y2R2 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC25.71■■□□□ 1.71
PTPN22Q9Y2R2 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC25.71■■□□□ 1.71
PTPN22Q9Y2R2 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC25.7■■□□□ 1.7
PTPN22Q9Y2R2 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC25.69■■□□□ 1.7
PTPN22Q9Y2R2 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC25.69■■□□□ 1.7
PTPN22Q9Y2R2 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC25.69■■□□□ 1.7
PTPN22Q9Y2R2 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC25.69■■□□□ 1.7
PTPN22Q9Y2R2 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC25.69■■□□□ 1.7
PTPN22Q9Y2R2 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC25.69■■□□□ 1.7
PTPN22Q9Y2R2 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC25.69■■□□□ 1.7
PTPN22Q9Y2R2 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
PTPN22Q9Y2R2 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC25.69■■□□□ 1.7
PTPN22Q9Y2R2 ERN1-208ENST00000606895 2068 ntBASIC25.68■■□□□ 1.7
PTPN22Q9Y2R2 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
PTPN22Q9Y2R2 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC25.68■■□□□ 1.7
PTPN22Q9Y2R2 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
PTPN22Q9Y2R2 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC25.67■■□□□ 1.7
PTPN22Q9Y2R2 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC25.67■■□□□ 1.7
PTPN22Q9Y2R2 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC25.67■■□□□ 1.7
PTPN22Q9Y2R2 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC25.67■■□□□ 1.7
PTPN22Q9Y2R2 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
PTPN22Q9Y2R2 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC25.67■■□□□ 1.7
PTPN22Q9Y2R2 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC25.67■■□□□ 1.7
PTPN22Q9Y2R2 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
PTPN22Q9Y2R2 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC25.66■■□□□ 1.7
PTPN22Q9Y2R2 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
PTPN22Q9Y2R2 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
PTPN22Q9Y2R2 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
PTPN22Q9Y2R2 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC25.66■■□□□ 1.7
PTPN22Q9Y2R2 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC25.66■■□□□ 1.7
PTPN22Q9Y2R2 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC25.66■■□□□ 1.7
PTPN22Q9Y2R2 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC25.66■■□□□ 1.7
PTPN22Q9Y2R2 AC010525.1-201ENST00000585559 441 ntBASIC25.66■■□□□ 1.7
PTPN22Q9Y2R2 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC25.66■■□□□ 1.7
PTPN22Q9Y2R2 WT1-AS_3.1-201ENST00000613262 234 ntBASIC25.66■■□□□ 1.7
PTPN22Q9Y2R2 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC25.66■■□□□ 1.7
PTPN22Q9Y2R2 AC133637.1-201ENST00000624115 1537 ntBASIC25.66■■□□□ 1.7
PTPN22Q9Y2R2 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC25.66■■□□□ 1.7
PTPN22Q9Y2R2 AC020928.2-201ENST00000588717 2197 ntBASIC25.66■■□□□ 1.7
PTPN22Q9Y2R2 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
PTPN22Q9Y2R2 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
PTPN22Q9Y2R2 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC25.65■■□□□ 1.7
PTPN22Q9Y2R2 GPX1P1-201ENST00000388829 606 ntBASIC25.65■■□□□ 1.7
PTPN22Q9Y2R2 APTR-205ENST00000447009 902 ntTSL 2 BASIC25.65■■□□□ 1.7
PTPN22Q9Y2R2 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC25.65■■□□□ 1.7
PTPN22Q9Y2R2 AC105233.4-201ENST00000642045 216 ntBASIC25.65■■□□□ 1.7
PTPN22Q9Y2R2 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC25.65■■□□□ 1.7
PTPN22Q9Y2R2 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
PTPN22Q9Y2R2 SHD-204ENST00000599689 1729 ntTSL 5 BASIC25.65■■□□□ 1.7
PTPN22Q9Y2R2 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
PTPN22Q9Y2R2 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC25.64■■□□□ 1.7
PTPN22Q9Y2R2 AC092803.2-201ENST00000564287 1899 ntBASIC25.64■■□□□ 1.7
PTPN22Q9Y2R2 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
PTPN22Q9Y2R2 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC25.64■■□□□ 1.7
PTPN22Q9Y2R2 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
PTPN22Q9Y2R2 METTL26-203ENST00000397664 604 ntTSL 2 BASIC25.64■■□□□ 1.7
PTPN22Q9Y2R2 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC25.64■■□□□ 1.7
PTPN22Q9Y2R2 WWOX-218ENST00000627394 894 ntTSL 5 BASIC25.64■■□□□ 1.7
PTPN22Q9Y2R2 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
PTPN22Q9Y2R2 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
Retrieved 100 of 98,524 protein–RNA pairs in 89.9 ms