Protein–RNA interactions for Protein: Q9NRF8

CTPS2, CTP synthase 2, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS2Q9NRF8 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CTPS2Q9NRF8 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC20.68■□□□□ 0.9
CTPS2Q9NRF8 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CTPS2Q9NRF8 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CTPS2Q9NRF8 STK25-234ENST00000535007 2459 ntTSL 2 BASIC20.67■□□□□ 0.9
CTPS2Q9NRF8 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC20.67■□□□□ 0.9
CTPS2Q9NRF8 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC20.67■□□□□ 0.9
CTPS2Q9NRF8 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CTPS2Q9NRF8 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CTPS2Q9NRF8 AC092028.1-203ENST00000608262 953 ntBASIC20.67■□□□□ 0.9
CTPS2Q9NRF8 AL035685.1-201ENST00000636663 812 ntBASIC20.67■□□□□ 0.9
CTPS2Q9NRF8 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CTPS2Q9NRF8 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CTPS2Q9NRF8 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CTPS2Q9NRF8 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CTPS2Q9NRF8 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
CTPS2Q9NRF8 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CTPS2Q9NRF8 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CTPS2Q9NRF8 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC20.66■□□□□ 0.9
CTPS2Q9NRF8 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CTPS2Q9NRF8 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC20.66■□□□□ 0.9
CTPS2Q9NRF8 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
CTPS2Q9NRF8 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CTPS2Q9NRF8 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CTPS2Q9NRF8 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC20.66■□□□□ 0.9
CTPS2Q9NRF8 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC20.66■□□□□ 0.9
CTPS2Q9NRF8 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CTPS2Q9NRF8 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CTPS2Q9NRF8 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
CTPS2Q9NRF8 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CTPS2Q9NRF8 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CTPS2Q9NRF8 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CTPS2Q9NRF8 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CTPS2Q9NRF8 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC20.65■□□□□ 0.9
CTPS2Q9NRF8 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CTPS2Q9NRF8 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CTPS2Q9NRF8 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC20.65■□□□□ 0.9
CTPS2Q9NRF8 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CTPS2Q9NRF8 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CTPS2Q9NRF8 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
CTPS2Q9NRF8 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CTPS2Q9NRF8 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CTPS2Q9NRF8 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CTPS2Q9NRF8 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC20.64■□□□□ 0.89
CTPS2Q9NRF8 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CTPS2Q9NRF8 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
CTPS2Q9NRF8 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
CTPS2Q9NRF8 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CTPS2Q9NRF8 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
CTPS2Q9NRF8 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
CTPS2Q9NRF8 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
CTPS2Q9NRF8 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC20.63■□□□□ 0.89
CTPS2Q9NRF8 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC20.63■□□□□ 0.89
CTPS2Q9NRF8 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CTPS2Q9NRF8 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CTPS2Q9NRF8 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CTPS2Q9NRF8 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CTPS2Q9NRF8 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
CTPS2Q9NRF8 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC20.63■□□□□ 0.89
CTPS2Q9NRF8 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC20.63■□□□□ 0.89
CTPS2Q9NRF8 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CTPS2Q9NRF8 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CTPS2Q9NRF8 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CTPS2Q9NRF8 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CTPS2Q9NRF8 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CTPS2Q9NRF8 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC20.63■□□□□ 0.89
CTPS2Q9NRF8 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CTPS2Q9NRF8 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
CTPS2Q9NRF8 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CTPS2Q9NRF8 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC20.62■□□□□ 0.89
CTPS2Q9NRF8 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CTPS2Q9NRF8 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CTPS2Q9NRF8 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC20.62■□□□□ 0.89
CTPS2Q9NRF8 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC20.62■□□□□ 0.89
CTPS2Q9NRF8 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC20.62■□□□□ 0.89
CTPS2Q9NRF8 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
CTPS2Q9NRF8 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CTPS2Q9NRF8 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CTPS2Q9NRF8 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CTPS2Q9NRF8 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC20.62■□□□□ 0.89
CTPS2Q9NRF8 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CTPS2Q9NRF8 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
CTPS2Q9NRF8 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC20.62■□□□□ 0.89
CTPS2Q9NRF8 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC20.62■□□□□ 0.89
CTPS2Q9NRF8 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CTPS2Q9NRF8 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CTPS2Q9NRF8 REST-206ENST00000612429 1376 ntTSL 5 BASIC20.61■□□□□ 0.89
CTPS2Q9NRF8 REST-207ENST00000616975 1370 ntTSL 5 BASIC20.61■□□□□ 0.89
CTPS2Q9NRF8 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CTPS2Q9NRF8 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CTPS2Q9NRF8 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC20.61■□□□□ 0.89
CTPS2Q9NRF8 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CTPS2Q9NRF8 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CTPS2Q9NRF8 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
CTPS2Q9NRF8 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC20.61■□□□□ 0.89
CTPS2Q9NRF8 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC20.61■□□□□ 0.89
CTPS2Q9NRF8 TSPY9P-201ENST00000440215 945 ntBASIC20.61■□□□□ 0.89
CTPS2Q9NRF8 TSPY11P-201ENST00000442607 1045 ntBASIC20.61■□□□□ 0.89
CTPS2Q9NRF8 OR2A1-AS1-204ENST00000470435 602 ntBASIC20.61■□□□□ 0.89
CTPS2Q9NRF8 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms