Protein–RNA interactions for Protein: Q9NRF8

CTPS2, CTP synthase 2, humanhuman

Predictions only

Length 586 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS2Q9NRF8 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CTPS2Q9NRF8 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC20.68■□□□□ 0.9
CTPS2Q9NRF8 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CTPS2Q9NRF8 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CTPS2Q9NRF8 STK25-234ENST00000535007 2459 ntTSL 2 BASIC20.67■□□□□ 0.9
CTPS2Q9NRF8 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC20.67■□□□□ 0.9
CTPS2Q9NRF8 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC20.67■□□□□ 0.9
CTPS2Q9NRF8 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CTPS2Q9NRF8 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CTPS2Q9NRF8 AC092028.1-203ENST00000608262 953 ntBASIC20.67■□□□□ 0.9
CTPS2Q9NRF8 AL035685.1-201ENST00000636663 812 ntBASIC20.67■□□□□ 0.9
CTPS2Q9NRF8 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CTPS2Q9NRF8 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CTPS2Q9NRF8 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CTPS2Q9NRF8 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CTPS2Q9NRF8 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
CTPS2Q9NRF8 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CTPS2Q9NRF8 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CTPS2Q9NRF8 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC20.66■□□□□ 0.9
CTPS2Q9NRF8 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CTPS2Q9NRF8 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC20.66■□□□□ 0.9
CTPS2Q9NRF8 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
CTPS2Q9NRF8 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CTPS2Q9NRF8 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CTPS2Q9NRF8 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC20.66■□□□□ 0.9
CTPS2Q9NRF8 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC20.66■□□□□ 0.9
CTPS2Q9NRF8 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CTPS2Q9NRF8 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CTPS2Q9NRF8 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
CTPS2Q9NRF8 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CTPS2Q9NRF8 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CTPS2Q9NRF8 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CTPS2Q9NRF8 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CTPS2Q9NRF8 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC20.65■□□□□ 0.9
CTPS2Q9NRF8 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CTPS2Q9NRF8 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CTPS2Q9NRF8 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC20.65■□□□□ 0.9
CTPS2Q9NRF8 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CTPS2Q9NRF8 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CTPS2Q9NRF8 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
CTPS2Q9NRF8 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CTPS2Q9NRF8 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CTPS2Q9NRF8 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CTPS2Q9NRF8 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC20.64■□□□□ 0.89
CTPS2Q9NRF8 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CTPS2Q9NRF8 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
CTPS2Q9NRF8 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
CTPS2Q9NRF8 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CTPS2Q9NRF8 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
CTPS2Q9NRF8 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
CTPS2Q9NRF8 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
CTPS2Q9NRF8 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC20.63■□□□□ 0.89
CTPS2Q9NRF8 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC20.63■□□□□ 0.89
CTPS2Q9NRF8 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CTPS2Q9NRF8 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CTPS2Q9NRF8 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CTPS2Q9NRF8 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CTPS2Q9NRF8 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
CTPS2Q9NRF8 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC20.63■□□□□ 0.89
CTPS2Q9NRF8 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC20.63■□□□□ 0.89
CTPS2Q9NRF8 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CTPS2Q9NRF8 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CTPS2Q9NRF8 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CTPS2Q9NRF8 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CTPS2Q9NRF8 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CTPS2Q9NRF8 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC20.63■□□□□ 0.89
CTPS2Q9NRF8 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CTPS2Q9NRF8 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
CTPS2Q9NRF8 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CTPS2Q9NRF8 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC20.62■□□□□ 0.89
CTPS2Q9NRF8 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CTPS2Q9NRF8 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CTPS2Q9NRF8 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC20.62■□□□□ 0.89
CTPS2Q9NRF8 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC20.62■□□□□ 0.89
CTPS2Q9NRF8 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC20.62■□□□□ 0.89
CTPS2Q9NRF8 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
CTPS2Q9NRF8 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CTPS2Q9NRF8 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CTPS2Q9NRF8 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CTPS2Q9NRF8 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC20.62■□□□□ 0.89
CTPS2Q9NRF8 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CTPS2Q9NRF8 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
CTPS2Q9NRF8 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC20.62■□□□□ 0.89
CTPS2Q9NRF8 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC20.62■□□□□ 0.89
CTPS2Q9NRF8 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CTPS2Q9NRF8 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CTPS2Q9NRF8 REST-206ENST00000612429 1376 ntTSL 5 BASIC20.61■□□□□ 0.89
CTPS2Q9NRF8 REST-207ENST00000616975 1370 ntTSL 5 BASIC20.61■□□□□ 0.89
CTPS2Q9NRF8 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CTPS2Q9NRF8 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CTPS2Q9NRF8 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC20.61■□□□□ 0.89
CTPS2Q9NRF8 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CTPS2Q9NRF8 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CTPS2Q9NRF8 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
CTPS2Q9NRF8 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC20.61■□□□□ 0.89
CTPS2Q9NRF8 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC20.61■□□□□ 0.89
CTPS2Q9NRF8 TSPY9P-201ENST00000440215 945 ntBASIC20.61■□□□□ 0.89
CTPS2Q9NRF8 TSPY11P-201ENST00000442607 1045 ntBASIC20.61■□□□□ 0.89
CTPS2Q9NRF8 OR2A1-AS1-204ENST00000470435 602 ntBASIC20.61■□□□□ 0.89
CTPS2Q9NRF8 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms