Protein–RNA interactions for Protein: Q9NNX9

VCX3A, Variable charge X-linked protein 3, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3AQ9NNX9 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC20.81■□□□□ 0.92
VCX3AQ9NNX9 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC20.81■□□□□ 0.92
VCX3AQ9NNX9 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC20.8■□□□□ 0.92
VCX3AQ9NNX9 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC20.8■□□□□ 0.92
VCX3AQ9NNX9 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
VCX3AQ9NNX9 FBXW4P1-201ENST00000426721 2239 ntBASIC20.8■□□□□ 0.92
VCX3AQ9NNX9 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
VCX3AQ9NNX9 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC20.8■□□□□ 0.92
VCX3AQ9NNX9 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
VCX3AQ9NNX9 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
VCX3AQ9NNX9 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
VCX3AQ9NNX9 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
VCX3AQ9NNX9 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC20.8■□□□□ 0.92
VCX3AQ9NNX9 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
VCX3AQ9NNX9 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
VCX3AQ9NNX9 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
VCX3AQ9NNX9 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC20.8■□□□□ 0.92
VCX3AQ9NNX9 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
VCX3AQ9NNX9 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
VCX3AQ9NNX9 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC20.79■□□□□ 0.92
VCX3AQ9NNX9 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC20.79■□□□□ 0.92
VCX3AQ9NNX9 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
VCX3AQ9NNX9 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
VCX3AQ9NNX9 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC20.79■□□□□ 0.92
VCX3AQ9NNX9 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
VCX3AQ9NNX9 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
VCX3AQ9NNX9 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
VCX3AQ9NNX9 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
VCX3AQ9NNX9 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
VCX3AQ9NNX9 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
VCX3AQ9NNX9 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
VCX3AQ9NNX9 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC20.78■□□□□ 0.92
VCX3AQ9NNX9 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
VCX3AQ9NNX9 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
VCX3AQ9NNX9 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
VCX3AQ9NNX9 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
VCX3AQ9NNX9 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
VCX3AQ9NNX9 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
VCX3AQ9NNX9 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
VCX3AQ9NNX9 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
VCX3AQ9NNX9 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
VCX3AQ9NNX9 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
VCX3AQ9NNX9 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC20.77■□□□□ 0.92
VCX3AQ9NNX9 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
VCX3AQ9NNX9 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
VCX3AQ9NNX9 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
VCX3AQ9NNX9 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
VCX3AQ9NNX9 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
VCX3AQ9NNX9 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
VCX3AQ9NNX9 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
VCX3AQ9NNX9 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
VCX3AQ9NNX9 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC20.77■□□□□ 0.92
VCX3AQ9NNX9 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
VCX3AQ9NNX9 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC20.77■□□□□ 0.91
VCX3AQ9NNX9 AC026310.3-201ENST00000625186 2373 ntBASIC20.77■□□□□ 0.91
VCX3AQ9NNX9 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
VCX3AQ9NNX9 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
VCX3AQ9NNX9 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
VCX3AQ9NNX9 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC20.76■□□□□ 0.91
VCX3AQ9NNX9 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
VCX3AQ9NNX9 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
VCX3AQ9NNX9 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC20.76■□□□□ 0.91
VCX3AQ9NNX9 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
VCX3AQ9NNX9 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
VCX3AQ9NNX9 SUZ12P1-203ENST00000578195 985 ntBASIC20.76■□□□□ 0.91
VCX3AQ9NNX9 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
VCX3AQ9NNX9 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
VCX3AQ9NNX9 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
VCX3AQ9NNX9 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
VCX3AQ9NNX9 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
VCX3AQ9NNX9 ESRRAP2-201ENST00000418437 1549 ntBASIC20.75■□□□□ 0.91
VCX3AQ9NNX9 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
VCX3AQ9NNX9 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
VCX3AQ9NNX9 C11orf96-202ENST00000528572 1834 ntBASIC20.75■□□□□ 0.91
VCX3AQ9NNX9 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
VCX3AQ9NNX9 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
VCX3AQ9NNX9 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
VCX3AQ9NNX9 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
VCX3AQ9NNX9 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
VCX3AQ9NNX9 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC20.75■□□□□ 0.91
VCX3AQ9NNX9 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC20.74■□□□□ 0.91
VCX3AQ9NNX9 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
VCX3AQ9NNX9 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
VCX3AQ9NNX9 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
VCX3AQ9NNX9 MIR219A2-201ENST00000608502 1504 ntBASIC20.74■□□□□ 0.91
VCX3AQ9NNX9 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC20.74■□□□□ 0.91
VCX3AQ9NNX9 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
VCX3AQ9NNX9 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
VCX3AQ9NNX9 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
VCX3AQ9NNX9 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
VCX3AQ9NNX9 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
VCX3AQ9NNX9 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
VCX3AQ9NNX9 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
VCX3AQ9NNX9 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC20.74■□□□□ 0.91
VCX3AQ9NNX9 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC20.74■□□□□ 0.91
VCX3AQ9NNX9 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
VCX3AQ9NNX9 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
VCX3AQ9NNX9 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
VCX3AQ9NNX9 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
VCX3AQ9NNX9 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 65.5 ms