Protein–RNA interactions for Protein: Q9H2H0

CXXC4, CXXC-type zinc finger protein 4, humanhuman

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC4Q9H2H0 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CXXC4Q9H2H0 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CXXC4Q9H2H0 HES6-206ENST00000409574 738 ntTSL 2 BASIC19.44■□□□□ 0.7
CXXC4Q9H2H0 BX842568.3-201ENST00000418104 571 ntBASIC19.44■□□□□ 0.7
CXXC4Q9H2H0 DUX4L2-201ENST00000561772 1275 ntBASIC19.44■□□□□ 0.7
CXXC4Q9H2H0 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CXXC4Q9H2H0 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC19.44■□□□□ 0.7
CXXC4Q9H2H0 DUX4L6-201ENST00000626483 1275 ntBASIC19.44■□□□□ 0.7
CXXC4Q9H2H0 DUX4L1-201ENST00000627662 1275 ntBASIC19.44■□□□□ 0.7
CXXC4Q9H2H0 DUX4L8-201ENST00000629013 1275 ntBASIC19.44■□□□□ 0.7
CXXC4Q9H2H0 DUX4L3-201ENST00000630187 1275 ntBASIC19.44■□□□□ 0.7
CXXC4Q9H2H0 DUX4L7-201ENST00000630678 1275 ntBASIC19.44■□□□□ 0.7
CXXC4Q9H2H0 DUX4L5-201ENST00000630834 1275 ntBASIC19.44■□□□□ 0.7
CXXC4Q9H2H0 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC19.44■□□□□ 0.7
CXXC4Q9H2H0 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CXXC4Q9H2H0 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CXXC4Q9H2H0 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CXXC4Q9H2H0 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CXXC4Q9H2H0 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CXXC4Q9H2H0 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
CXXC4Q9H2H0 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CXXC4Q9H2H0 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CXXC4Q9H2H0 ALDH1A3-203ENST00000557963 1670 ntBASIC19.43■□□□□ 0.7
CXXC4Q9H2H0 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CXXC4Q9H2H0 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC19.43■□□□□ 0.7
CXXC4Q9H2H0 ABCB10P4-201ENST00000566803 2184 ntBASIC19.43■□□□□ 0.7
CXXC4Q9H2H0 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CXXC4Q9H2H0 AC004911.1-201ENST00000416316 871 ntBASIC19.43■□□□□ 0.7
CXXC4Q9H2H0 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC19.43■□□□□ 0.7
CXXC4Q9H2H0 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC19.43■□□□□ 0.7
CXXC4Q9H2H0 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC19.43■□□□□ 0.7
CXXC4Q9H2H0 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC19.43■□□□□ 0.7
CXXC4Q9H2H0 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC19.43■□□□□ 0.7
CXXC4Q9H2H0 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC19.43■□□□□ 0.7
CXXC4Q9H2H0 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC19.43■□□□□ 0.7
CXXC4Q9H2H0 AL031602.1-201ENST00000633169 911 ntBASIC19.43■□□□□ 0.7
CXXC4Q9H2H0 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
CXXC4Q9H2H0 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC19.43■□□□□ 0.7
CXXC4Q9H2H0 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC19.43■□□□□ 0.7
CXXC4Q9H2H0 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
CXXC4Q9H2H0 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
CXXC4Q9H2H0 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CXXC4Q9H2H0 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CXXC4Q9H2H0 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CXXC4Q9H2H0 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
CXXC4Q9H2H0 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CXXC4Q9H2H0 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CXXC4Q9H2H0 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CXXC4Q9H2H0 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
CXXC4Q9H2H0 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC19.42■□□□□ 0.7
CXXC4Q9H2H0 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC19.42■□□□□ 0.7
CXXC4Q9H2H0 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC19.42■□□□□ 0.7
CXXC4Q9H2H0 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CXXC4Q9H2H0 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CXXC4Q9H2H0 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CXXC4Q9H2H0 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CXXC4Q9H2H0 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CXXC4Q9H2H0 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC19.42■□□□□ 0.7
CXXC4Q9H2H0 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC19.42■□□□□ 0.7
CXXC4Q9H2H0 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CXXC4Q9H2H0 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CXXC4Q9H2H0 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CXXC4Q9H2H0 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CXXC4Q9H2H0 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CXXC4Q9H2H0 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CXXC4Q9H2H0 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
CXXC4Q9H2H0 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CXXC4Q9H2H0 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CXXC4Q9H2H0 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CXXC4Q9H2H0 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CXXC4Q9H2H0 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CXXC4Q9H2H0 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CXXC4Q9H2H0 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CXXC4Q9H2H0 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CXXC4Q9H2H0 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC19.41■□□□□ 0.7
CXXC4Q9H2H0 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CXXC4Q9H2H0 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CXXC4Q9H2H0 EI24-213ENST00000618552 1747 ntTSL 5 BASIC19.4■□□□□ 0.7
CXXC4Q9H2H0 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC19.4■□□□□ 0.7
CXXC4Q9H2H0 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CXXC4Q9H2H0 GRAMD4P2-201ENST00000423297 1097 ntBASIC19.4■□□□□ 0.7
CXXC4Q9H2H0 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CXXC4Q9H2H0 VPS53-216ENST00000574029 585 ntTSL 4 BASIC19.4■□□□□ 0.7
CXXC4Q9H2H0 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC19.4■□□□□ 0.7
CXXC4Q9H2H0 RAB43-208ENST00000615093 783 ntTSL 5 BASIC19.4■□□□□ 0.7
CXXC4Q9H2H0 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CXXC4Q9H2H0 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CXXC4Q9H2H0 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
CXXC4Q9H2H0 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CXXC4Q9H2H0 EI24-204ENST00000527235 1625 ntTSL 5 BASIC19.4■□□□□ 0.7
CXXC4Q9H2H0 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CXXC4Q9H2H0 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC19.4■□□□□ 0.7
CXXC4Q9H2H0 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CXXC4Q9H2H0 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.69
CXXC4Q9H2H0 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC19.39■□□□□ 0.69
CXXC4Q9H2H0 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC19.39■□□□□ 0.69
CXXC4Q9H2H0 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
CXXC4Q9H2H0 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CXXC4Q9H2H0 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC19.39■□□□□ 0.69
CXXC4Q9H2H0 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 13.2 ms