Protein–RNA interactions for Protein: Q9BZA7

PCDH11X, Protocadherin-11 X-linked, humanhuman

Predictions only

Length 1,347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11XQ9BZA7 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC29.36■■■□□ 2.29
PCDH11XQ9BZA7 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC29.36■■■□□ 2.29
PCDH11XQ9BZA7 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
PCDH11XQ9BZA7 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC29.35■■■□□ 2.29
PCDH11XQ9BZA7 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC29.35■■■□□ 2.29
PCDH11XQ9BZA7 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC29.35■■■□□ 2.29
PCDH11XQ9BZA7 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC29.35■■■□□ 2.29
PCDH11XQ9BZA7 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
PCDH11XQ9BZA7 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC29.35■■■□□ 2.29
PCDH11XQ9BZA7 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC29.35■■■□□ 2.29
PCDH11XQ9BZA7 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
PCDH11XQ9BZA7 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC29.35■■■□□ 2.29
PCDH11XQ9BZA7 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
PCDH11XQ9BZA7 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC29.35■■■□□ 2.29
PCDH11XQ9BZA7 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC29.35■■■□□ 2.29
PCDH11XQ9BZA7 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC29.35■■■□□ 2.29
PCDH11XQ9BZA7 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC29.35■■■□□ 2.29
PCDH11XQ9BZA7 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC29.34■■■□□ 2.29
PCDH11XQ9BZA7 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
PCDH11XQ9BZA7 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
PCDH11XQ9BZA7 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC29.34■■■□□ 2.29
PCDH11XQ9BZA7 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
PCDH11XQ9BZA7 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC29.34■■■□□ 2.29
PCDH11XQ9BZA7 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC29.34■■■□□ 2.29
PCDH11XQ9BZA7 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
PCDH11XQ9BZA7 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
PCDH11XQ9BZA7 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
PCDH11XQ9BZA7 MPST-204ENST00000404393 1329 ntTSL 5 BASIC29.33■■■□□ 2.29
PCDH11XQ9BZA7 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC29.33■■■□□ 2.29
PCDH11XQ9BZA7 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC29.33■■■□□ 2.29
PCDH11XQ9BZA7 ME3-201ENST00000323418 1068 ntTSL 5 BASIC29.33■■■□□ 2.29
PCDH11XQ9BZA7 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC29.33■■■□□ 2.29
PCDH11XQ9BZA7 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC29.33■■■□□ 2.29
PCDH11XQ9BZA7 VPS53-216ENST00000574029 585 ntTSL 4 BASIC29.33■■■□□ 2.29
PCDH11XQ9BZA7 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC29.33■■■□□ 2.29
PCDH11XQ9BZA7 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC29.33■■■□□ 2.29
PCDH11XQ9BZA7 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC29.33■■■□□ 2.29
PCDH11XQ9BZA7 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
PCDH11XQ9BZA7 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
PCDH11XQ9BZA7 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
PCDH11XQ9BZA7 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
PCDH11XQ9BZA7 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
PCDH11XQ9BZA7 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
PCDH11XQ9BZA7 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
PCDH11XQ9BZA7 NT5C3AP1-201ENST00000394500 1012 ntBASIC29.32■■■□□ 2.28
PCDH11XQ9BZA7 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC29.32■■■□□ 2.28
PCDH11XQ9BZA7 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC29.32■■■□□ 2.28
PCDH11XQ9BZA7 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC29.32■■■□□ 2.28
PCDH11XQ9BZA7 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC29.32■■■□□ 2.28
PCDH11XQ9BZA7 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC29.32■■■□□ 2.28
PCDH11XQ9BZA7 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
PCDH11XQ9BZA7 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
PCDH11XQ9BZA7 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
PCDH11XQ9BZA7 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC29.31■■■□□ 2.28
PCDH11XQ9BZA7 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
PCDH11XQ9BZA7 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
PCDH11XQ9BZA7 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
PCDH11XQ9BZA7 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC29.31■■■□□ 2.28
PCDH11XQ9BZA7 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
PCDH11XQ9BZA7 EI24-213ENST00000618552 1747 ntTSL 5 BASIC29.3■■■□□ 2.28
PCDH11XQ9BZA7 AC144652.1-201ENST00000609974 1624 ntBASIC29.3■■■□□ 2.28
PCDH11XQ9BZA7 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC29.3■■■□□ 2.28
PCDH11XQ9BZA7 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC29.3■■■□□ 2.28
PCDH11XQ9BZA7 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC29.3■■■□□ 2.28
PCDH11XQ9BZA7 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC29.3■■■□□ 2.28
PCDH11XQ9BZA7 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC29.3■■■□□ 2.28
PCDH11XQ9BZA7 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
PCDH11XQ9BZA7 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC29.29■■■□□ 2.28
PCDH11XQ9BZA7 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
PCDH11XQ9BZA7 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
PCDH11XQ9BZA7 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
PCDH11XQ9BZA7 ID1-201ENST00000376105 1233 ntBASIC29.29■■■□□ 2.28
PCDH11XQ9BZA7 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC29.29■■■□□ 2.28
PCDH11XQ9BZA7 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC29.29■■■□□ 2.28
PCDH11XQ9BZA7 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC29.29■■■□□ 2.28
PCDH11XQ9BZA7 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC29.29■■■□□ 2.28
PCDH11XQ9BZA7 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC29.29■■■□□ 2.28
PCDH11XQ9BZA7 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC29.29■■■□□ 2.28
PCDH11XQ9BZA7 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
PCDH11XQ9BZA7 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC29.29■■■□□ 2.28
PCDH11XQ9BZA7 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC29.29■■■□□ 2.28
PCDH11XQ9BZA7 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
PCDH11XQ9BZA7 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
PCDH11XQ9BZA7 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC29.28■■■□□ 2.28
PCDH11XQ9BZA7 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC29.28■■■□□ 2.28
PCDH11XQ9BZA7 LINC01529-204ENST00000636474 1715 ntBASIC29.28■■■□□ 2.28
PCDH11XQ9BZA7 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
PCDH11XQ9BZA7 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC29.28■■■□□ 2.28
PCDH11XQ9BZA7 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC29.28■■■□□ 2.28
PCDH11XQ9BZA7 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC29.28■■■□□ 2.28
PCDH11XQ9BZA7 AC105233.4-201ENST00000642045 216 ntBASIC29.28■■■□□ 2.28
PCDH11XQ9BZA7 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC29.28■■■□□ 2.28
PCDH11XQ9BZA7 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
PCDH11XQ9BZA7 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC29.27■■■□□ 2.28
PCDH11XQ9BZA7 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC29.27■■■□□ 2.28
PCDH11XQ9BZA7 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
PCDH11XQ9BZA7 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC29.27■■■□□ 2.28
PCDH11XQ9BZA7 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC29.27■■■□□ 2.28
PCDH11XQ9BZA7 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC29.26■■■□□ 2.27
PCDH11XQ9BZA7 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC29.26■■■□□ 2.27
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms