Protein–RNA interactions for Protein: Q9BYR3

KRTAP4-4, Keratin-associated protein 4-4, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-4Q9BYR3 AC245100.4-201ENST00000634549 1082 ntTSL 5 BASIC4.58□□□□□ -1.68
KRTAP4-4Q9BYR3 MTND2P41-201ENST00000637599 773 ntBASIC4.58□□□□□ -1.68
KRTAP4-4Q9BYR3 AC099654.13-201ENST00000639774 207 ntBASIC4.58□□□□□ -1.68
KRTAP4-4Q9BYR3 AC139713.2-210ENST00000641741 992 ntBASIC4.58□□□□□ -1.68
KRTAP4-4Q9BYR3 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
KRTAP4-4Q9BYR3 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC4.58□□□□□ -1.68
KRTAP4-4Q9BYR3 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
KRTAP4-4Q9BYR3 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
KRTAP4-4Q9BYR3 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
KRTAP4-4Q9BYR3 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
KRTAP4-4Q9BYR3 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
KRTAP4-4Q9BYR3 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
KRTAP4-4Q9BYR3 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC4.57□□□□□ -1.68
KRTAP4-4Q9BYR3 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
KRTAP4-4Q9BYR3 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
KRTAP4-4Q9BYR3 AC135983.2-203ENST00000454486 1613 ntBASIC4.57□□□□□ -1.68
KRTAP4-4Q9BYR3 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC4.57□□□□□ -1.68
KRTAP4-4Q9BYR3 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC4.57□□□□□ -1.68
KRTAP4-4Q9BYR3 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
KRTAP4-4Q9BYR3 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
KRTAP4-4Q9BYR3 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
KRTAP4-4Q9BYR3 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
KRTAP4-4Q9BYR3 ANKRD36BP1-202ENST00000604892 1417 ntBASIC4.57□□□□□ -1.68
KRTAP4-4Q9BYR3 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC4.57□□□□□ -1.68
KRTAP4-4Q9BYR3 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
KRTAP4-4Q9BYR3 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
KRTAP4-4Q9BYR3 NAT2-201ENST00000286479 1322 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
KRTAP4-4Q9BYR3 RNASE4-202ENST00000555597 1341 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
KRTAP4-4Q9BYR3 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
KRTAP4-4Q9BYR3 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
KRTAP4-4Q9BYR3 RERGL-201ENST00000229002 1147 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
KRTAP4-4Q9BYR3 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
KRTAP4-4Q9BYR3 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
KRTAP4-4Q9BYR3 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
KRTAP4-4Q9BYR3 GGCT-205ENST00000409436 954 ntTSL 3 BASIC4.57□□□□□ -1.68
KRTAP4-4Q9BYR3 BCAS2P3-201ENST00000416374 767 ntBASIC4.57□□□□□ -1.68
KRTAP4-4Q9BYR3 CLDN10-AS1-201ENST00000416909 895 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
KRTAP4-4Q9BYR3 IFNNP1-201ENST00000429219 553 ntBASIC4.57□□□□□ -1.68
KRTAP4-4Q9BYR3 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC4.57□□□□□ -1.68
KRTAP4-4Q9BYR3 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC4.57□□□□□ -1.68
KRTAP4-4Q9BYR3 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC4.57□□□□□ -1.68
KRTAP4-4Q9BYR3 MTND2P6-201ENST00000455337 1030 ntBASIC4.57□□□□□ -1.68
KRTAP4-4Q9BYR3 AC078785.2-201ENST00000462010 1253 ntTSL 3 BASIC4.57□□□□□ -1.68
KRTAP4-4Q9BYR3 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
KRTAP4-4Q9BYR3 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
KRTAP4-4Q9BYR3 NAA50-208ENST00000497255 789 ntTSL 5 BASIC4.57□□□□□ -1.68
KRTAP4-4Q9BYR3 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC4.57□□□□□ -1.68
KRTAP4-4Q9BYR3 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC4.57□□□□□ -1.68
KRTAP4-4Q9BYR3 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC4.57□□□□□ -1.68
KRTAP4-4Q9BYR3 ELL2P2-201ENST00000515135 694 ntBASIC4.57□□□□□ -1.68
KRTAP4-4Q9BYR3 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC4.57□□□□□ -1.68
KRTAP4-4Q9BYR3 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC4.57□□□□□ -1.68
KRTAP4-4Q9BYR3 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC4.57□□□□□ -1.68
KRTAP4-4Q9BYR3 LINC00871-204ENST00000556886 866 ntTSL 3 BASIC4.57□□□□□ -1.68
KRTAP4-4Q9BYR3 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC4.57□□□□□ -1.68
KRTAP4-4Q9BYR3 HMGB1P8-201ENST00000558211 949 ntBASIC4.57□□□□□ -1.68
KRTAP4-4Q9BYR3 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
KRTAP4-4Q9BYR3 MIR4760-201ENST00000585040 80 ntBASIC4.57□□□□□ -1.68
KRTAP4-4Q9BYR3 BNIP3P29-201ENST00000598302 571 ntBASIC4.57□□□□□ -1.68
KRTAP4-4Q9BYR3 AC018754.1-201ENST00000607486 925 ntBASIC4.57□□□□□ -1.68
KRTAP4-4Q9BYR3 AC096586.2-201ENST00000610260 441 ntBASIC4.57□□□□□ -1.68
KRTAP4-4Q9BYR3 AL355073.2-201ENST00000612106 557 ntBASIC4.57□□□□□ -1.68
KRTAP4-4Q9BYR3 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC4.57□□□□□ -1.68
KRTAP4-4Q9BYR3 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
KRTAP4-4Q9BYR3 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
KRTAP4-4Q9BYR3 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
KRTAP4-4Q9BYR3 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
KRTAP4-4Q9BYR3 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
KRTAP4-4Q9BYR3 AC022413.1-201ENST00000624602 984 ntBASIC4.57□□□□□ -1.68
KRTAP4-4Q9BYR3 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC4.57□□□□□ -1.68
KRTAP4-4Q9BYR3 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
KRTAP4-4Q9BYR3 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
KRTAP4-4Q9BYR3 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
KRTAP4-4Q9BYR3 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
KRTAP4-4Q9BYR3 SHF-206ENST00000560471 2499 ntTSL 5 BASIC4.57□□□□□ -1.68
KRTAP4-4Q9BYR3 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC4.57□□□□□ -1.68
KRTAP4-4Q9BYR3 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC4.57□□□□□ -1.68
KRTAP4-4Q9BYR3 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
KRTAP4-4Q9BYR3 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC4.57□□□□□ -1.68
KRTAP4-4Q9BYR3 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC4.57□□□□□ -1.68
KRTAP4-4Q9BYR3 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
KRTAP4-4Q9BYR3 LINC01763-201ENST00000425185 1547 ntTSL 3 BASIC4.56□□□□□ -1.68
KRTAP4-4Q9BYR3 AC110285.7-201ENST00000624417 1536 ntBASIC4.56□□□□□ -1.68
KRTAP4-4Q9BYR3 AP001002.1-201ENST00000625148 1513 ntBASIC4.56□□□□□ -1.68
KRTAP4-4Q9BYR3 WRB-202ENST00000380708 1464 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
KRTAP4-4Q9BYR3 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
KRTAP4-4Q9BYR3 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
KRTAP4-4Q9BYR3 OPRM1-210ENST00000452687 1352 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
KRTAP4-4Q9BYR3 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC4.56□□□□□ -1.68
KRTAP4-4Q9BYR3 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC4.56□□□□□ -1.68
KRTAP4-4Q9BYR3 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
KRTAP4-4Q9BYR3 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
KRTAP4-4Q9BYR3 AL627171.1-201ENST00000618845 1308 ntBASIC4.56□□□□□ -1.68
KRTAP4-4Q9BYR3 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC4.56□□□□□ -1.68
KRTAP4-4Q9BYR3 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
KRTAP4-4Q9BYR3 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
KRTAP4-4Q9BYR3 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
KRTAP4-4Q9BYR3 AC135068.1-201ENST00000332663 1084 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
KRTAP4-4Q9BYR3 TTC32-201ENST00000333610 822 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
KRTAP4-4Q9BYR3 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms