Protein–RNA interactions for Protein: Q96T58

SPEN, Msx2-interacting protein, humanhuman

Known RBP Predictions only

Length 3,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPENQ96T58 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC20.37■□□□□ 0.85
SPENQ96T58 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC20.37■□□□□ 0.85
SPENQ96T58 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC20.37■□□□□ 0.85
SPENQ96T58 LSR-205ENST00000427250 1606 ntTSL 2 BASIC20.36■□□□□ 0.85
SPENQ96T58 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SPENQ96T58 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
SPENQ96T58 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC20.36■□□□□ 0.85
SPENQ96T58 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
SPENQ96T58 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC20.36■□□□□ 0.85
SPENQ96T58 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
SPENQ96T58 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SPENQ96T58 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC20.36■□□□□ 0.85
SPENQ96T58 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SPENQ96T58 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC20.35■□□□□ 0.85
SPENQ96T58 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
SPENQ96T58 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC20.35■□□□□ 0.85
SPENQ96T58 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SPENQ96T58 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SPENQ96T58 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
SPENQ96T58 GXYLT1P2-201ENST00000433312 1230 ntBASIC20.35■□□□□ 0.85
SPENQ96T58 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC20.35■□□□□ 0.85
SPENQ96T58 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SPENQ96T58 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SPENQ96T58 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC20.35■□□□□ 0.85
SPENQ96T58 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SPENQ96T58 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC20.34■□□□□ 0.85
SPENQ96T58 STK32C-205ENST00000456004 607 ntTSL 2 BASIC20.34■□□□□ 0.85
SPENQ96T58 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC20.34■□□□□ 0.85
SPENQ96T58 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC20.34■□□□□ 0.85
SPENQ96T58 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC20.34■□□□□ 0.85
SPENQ96T58 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SPENQ96T58 NTF6G-201ENST00000591094 616 ntBASIC20.34■□□□□ 0.85
SPENQ96T58 AL354811.1-201ENST00000610286 706 ntBASIC20.34■□□□□ 0.85
SPENQ96T58 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SPENQ96T58 GAS2L1P2-201ENST00000436355 1356 ntBASIC20.34■□□□□ 0.85
SPENQ96T58 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
SPENQ96T58 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
SPENQ96T58 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SPENQ96T58 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SPENQ96T58 NT5C3AP1-201ENST00000394500 1012 ntBASIC20.33■□□□□ 0.85
SPENQ96T58 AC009086.3-201ENST00000623486 1008 ntBASIC20.33■□□□□ 0.85
SPENQ96T58 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC20.33■□□□□ 0.85
SPENQ96T58 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
SPENQ96T58 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SPENQ96T58 EI24-204ENST00000527235 1625 ntTSL 5 BASIC20.33■□□□□ 0.85
SPENQ96T58 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
SPENQ96T58 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
SPENQ96T58 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC20.33■□□□□ 0.84
SPENQ96T58 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC20.33■□□□□ 0.84
SPENQ96T58 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SPENQ96T58 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
SPENQ96T58 AP005435.1-201ENST00000529293 1178 ntBASIC20.33■□□□□ 0.84
SPENQ96T58 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC20.32■□□□□ 0.84
SPENQ96T58 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
SPENQ96T58 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC20.32■□□□□ 0.84
SPENQ96T58 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SPENQ96T58 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
SPENQ96T58 STX7-201ENST00000367937 1090 ntTSL 5 BASIC20.32■□□□□ 0.84
SPENQ96T58 WWOX-218ENST00000627394 894 ntTSL 5 BASIC20.32■□□□□ 0.84
SPENQ96T58 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
SPENQ96T58 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
SPENQ96T58 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SPENQ96T58 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SPENQ96T58 MIR572-201ENST00000384983 95 ntBASIC20.31■□□□□ 0.84
SPENQ96T58 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC20.31■□□□□ 0.84
SPENQ96T58 TPRG1LP1-201ENST00000598702 760 ntBASIC20.31■□□□□ 0.84
SPENQ96T58 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SPENQ96T58 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC20.31■□□□□ 0.84
SPENQ96T58 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC20.31■□□□□ 0.84
SPENQ96T58 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SPENQ96T58 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SPENQ96T58 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
SPENQ96T58 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SPENQ96T58 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SPENQ96T58 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
SPENQ96T58 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
SPENQ96T58 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
SPENQ96T58 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SPENQ96T58 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC20.3■□□□□ 0.84
SPENQ96T58 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SPENQ96T58 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SPENQ96T58 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
SPENQ96T58 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SPENQ96T58 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC20.3■□□□□ 0.84
SPENQ96T58 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC20.3■□□□□ 0.84
SPENQ96T58 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SPENQ96T58 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC20.3■□□□□ 0.84
SPENQ96T58 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
SPENQ96T58 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SPENQ96T58 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
SPENQ96T58 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC20.3■□□□□ 0.84
SPENQ96T58 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC20.3■□□□□ 0.84
SPENQ96T58 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC20.3■□□□□ 0.84
SPENQ96T58 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
SPENQ96T58 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC20.3■□□□□ 0.84
SPENQ96T58 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SPENQ96T58 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC20.29■□□□□ 0.84
SPENQ96T58 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
SPENQ96T58 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
SPENQ96T58 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 10.4 ms