Protein–RNA interactions for Protein: Q8WXH0

SYNE2, Nesprin-2, humanhuman

Known RBP Predictions only

Length 6,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2Q8WXH0 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC9.34□□□□□ -0.91
SYNE2Q8WXH0 AC105036.2-201ENST00000569468 176 ntBASIC9.34□□□□□ -0.91
SYNE2Q8WXH0 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
SYNE2Q8WXH0 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC9.33□□□□□ -0.92
SYNE2Q8WXH0 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC9.33□□□□□ -0.92
SYNE2Q8WXH0 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
SYNE2Q8WXH0 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC9.33□□□□□ -0.92
SYNE2Q8WXH0 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC9.33□□□□□ -0.92
SYNE2Q8WXH0 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
SYNE2Q8WXH0 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
SYNE2Q8WXH0 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC9.33□□□□□ -0.92
SYNE2Q8WXH0 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
SYNE2Q8WXH0 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
SYNE2Q8WXH0 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC9.33□□□□□ -0.92
SYNE2Q8WXH0 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
SYNE2Q8WXH0 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC9.33□□□□□ -0.92
SYNE2Q8WXH0 MFSD11-216ENST00000590393 1141 ntBASIC9.33□□□□□ -0.92
SYNE2Q8WXH0 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC9.33□□□□□ -0.92
SYNE2Q8WXH0 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
SYNE2Q8WXH0 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC9.32□□□□□ -0.92
SYNE2Q8WXH0 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
SYNE2Q8WXH0 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
SYNE2Q8WXH0 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC9.32□□□□□ -0.92
SYNE2Q8WXH0 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC9.32□□□□□ -0.92
SYNE2Q8WXH0 Z99916.2-201ENST00000604037 246 ntBASIC9.32□□□□□ -0.92
SYNE2Q8WXH0 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC9.32□□□□□ -0.92
SYNE2Q8WXH0 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC9.32□□□□□ -0.92
SYNE2Q8WXH0 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC9.32□□□□□ -0.92
SYNE2Q8WXH0 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
SYNE2Q8WXH0 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
SYNE2Q8WXH0 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
SYNE2Q8WXH0 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC9.32□□□□□ -0.92
SYNE2Q8WXH0 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC9.32□□□□□ -0.92
SYNE2Q8WXH0 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC9.32□□□□□ -0.92
SYNE2Q8WXH0 CD177P1-201ENST00000606252 935 ntBASIC9.32□□□□□ -0.92
SYNE2Q8WXH0 AC092865.7-201ENST00000641832 219 ntBASIC9.32□□□□□ -0.92
SYNE2Q8WXH0 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC9.32□□□□□ -0.92
SYNE2Q8WXH0 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC9.32□□□□□ -0.92
SYNE2Q8WXH0 BET1L-207ENST00000529614 560 ntTSL 5 BASIC9.32□□□□□ -0.92
SYNE2Q8WXH0 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
SYNE2Q8WXH0 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
SYNE2Q8WXH0 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
SYNE2Q8WXH0 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC9.32□□□□□ -0.92
SYNE2Q8WXH0 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC9.32□□□□□ -0.92
SYNE2Q8WXH0 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC9.32□□□□□ -0.92
SYNE2Q8WXH0 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC9.32□□□□□ -0.92
SYNE2Q8WXH0 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC9.31□□□□□ -0.92
SYNE2Q8WXH0 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
SYNE2Q8WXH0 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC9.31□□□□□ -0.92
SYNE2Q8WXH0 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC9.31□□□□□ -0.92
SYNE2Q8WXH0 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC9.31□□□□□ -0.92
SYNE2Q8WXH0 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC9.31□□□□□ -0.92
SYNE2Q8WXH0 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
SYNE2Q8WXH0 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC9.31□□□□□ -0.92
SYNE2Q8WXH0 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC9.31□□□□□ -0.92
SYNE2Q8WXH0 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC9.31□□□□□ -0.92
SYNE2Q8WXH0 CRAT-202ENST00000393384 973 ntTSL 2 BASIC9.31□□□□□ -0.92
SYNE2Q8WXH0 SPI1-203ENST00000533030 661 ntTSL 2 BASIC9.31□□□□□ -0.92
SYNE2Q8WXH0 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC9.31□□□□□ -0.92
SYNE2Q8WXH0 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC9.31□□□□□ -0.92
SYNE2Q8WXH0 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
SYNE2Q8WXH0 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC9.31□□□□□ -0.92
SYNE2Q8WXH0 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC9.31□□□□□ -0.92
SYNE2Q8WXH0 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
SYNE2Q8WXH0 C1QBPP2-201ENST00000528754 825 ntBASIC9.3□□□□□ -0.92
SYNE2Q8WXH0 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
SYNE2Q8WXH0 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
SYNE2Q8WXH0 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC9.3□□□□□ -0.92
SYNE2Q8WXH0 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC9.3□□□□□ -0.92
SYNE2Q8WXH0 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
SYNE2Q8WXH0 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
SYNE2Q8WXH0 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
SYNE2Q8WXH0 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
SYNE2Q8WXH0 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
SYNE2Q8WXH0 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
SYNE2Q8WXH0 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC9.3□□□□□ -0.92
SYNE2Q8WXH0 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC9.3□□□□□ -0.92
SYNE2Q8WXH0 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC9.3□□□□□ -0.92
SYNE2Q8WXH0 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC9.3□□□□□ -0.92
SYNE2Q8WXH0 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC9.3□□□□□ -0.92
SYNE2Q8WXH0 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
SYNE2Q8WXH0 KRT18P56-201ENST00000507275 550 ntBASIC9.3□□□□□ -0.92
SYNE2Q8WXH0 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC9.3□□□□□ -0.92
SYNE2Q8WXH0 DUX4L4-201ENST00000566884 1269 ntBASIC9.3□□□□□ -0.92
SYNE2Q8WXH0 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC9.3□□□□□ -0.92
SYNE2Q8WXH0 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC9.3□□□□□ -0.92
SYNE2Q8WXH0 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC9.3□□□□□ -0.92
SYNE2Q8WXH0 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC9.3□□□□□ -0.92
SYNE2Q8WXH0 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC9.3□□□□□ -0.92
SYNE2Q8WXH0 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC9.29□□□□□ -0.92
SYNE2Q8WXH0 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
SYNE2Q8WXH0 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
SYNE2Q8WXH0 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC9.29□□□□□ -0.92
SYNE2Q8WXH0 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC9.29□□□□□ -0.92
SYNE2Q8WXH0 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC9.29□□□□□ -0.92
SYNE2Q8WXH0 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
SYNE2Q8WXH0 RNF146-204ENST00000476956 884 ntTSL 2 BASIC9.29□□□□□ -0.92
SYNE2Q8WXH0 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC9.29□□□□□ -0.92
SYNE2Q8WXH0 AL049597.2-201ENST00000565575 961 ntBASIC9.29□□□□□ -0.92
SYNE2Q8WXH0 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms