Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC23.62■■□□□ 1.37
RNF135Q8IUD6 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC23.62■■□□□ 1.37
RNF135Q8IUD6 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
RNF135Q8IUD6 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC23.62■■□□□ 1.37
RNF135Q8IUD6 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC23.62■■□□□ 1.37
RNF135Q8IUD6 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC23.62■■□□□ 1.37
RNF135Q8IUD6 GXYLT1P5-201ENST00000614548 1189 ntBASIC23.62■■□□□ 1.37
RNF135Q8IUD6 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
RNF135Q8IUD6 AC012414.1-201ENST00000556676 535 ntBASIC23.61■■□□□ 1.37
RNF135Q8IUD6 EMC9-206ENST00000560403 872 ntTSL 2 BASIC23.61■■□□□ 1.37
RNF135Q8IUD6 AC080038.1-201ENST00000611274 1154 ntBASIC23.61■■□□□ 1.37
RNF135Q8IUD6 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC23.61■■□□□ 1.37
RNF135Q8IUD6 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
RNF135Q8IUD6 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
RNF135Q8IUD6 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
RNF135Q8IUD6 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
RNF135Q8IUD6 AC131274.2-201ENST00000580697 1507 ntBASIC23.6■■□□□ 1.37
RNF135Q8IUD6 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
RNF135Q8IUD6 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
RNF135Q8IUD6 MIR572-201ENST00000384983 95 ntBASIC23.6■■□□□ 1.37
RNF135Q8IUD6 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
RNF135Q8IUD6 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC23.6■■□□□ 1.37
RNF135Q8IUD6 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC23.6■■□□□ 1.37
RNF135Q8IUD6 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC23.6■■□□□ 1.37
RNF135Q8IUD6 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC23.6■■□□□ 1.37
RNF135Q8IUD6 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC23.6■■□□□ 1.37
RNF135Q8IUD6 AC093323.1-202ENST00000635031 2045 ntBASIC23.6■■□□□ 1.37
RNF135Q8IUD6 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC23.6■■□□□ 1.37
RNF135Q8IUD6 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
RNF135Q8IUD6 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC23.6■■□□□ 1.37
RNF135Q8IUD6 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
RNF135Q8IUD6 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
RNF135Q8IUD6 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
RNF135Q8IUD6 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
RNF135Q8IUD6 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC23.59■■□□□ 1.37
RNF135Q8IUD6 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
RNF135Q8IUD6 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
RNF135Q8IUD6 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC23.59■■□□□ 1.37
RNF135Q8IUD6 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC23.59■■□□□ 1.37
RNF135Q8IUD6 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC23.59■■□□□ 1.37
RNF135Q8IUD6 AL354811.1-201ENST00000610286 706 ntBASIC23.59■■□□□ 1.37
RNF135Q8IUD6 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
RNF135Q8IUD6 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
RNF135Q8IUD6 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC23.59■■□□□ 1.37
RNF135Q8IUD6 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC23.59■■□□□ 1.37
RNF135Q8IUD6 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC23.59■■□□□ 1.37
RNF135Q8IUD6 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC23.59■■□□□ 1.37
RNF135Q8IUD6 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC23.58■■□□□ 1.37
RNF135Q8IUD6 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.37
RNF135Q8IUD6 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
RNF135Q8IUD6 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
RNF135Q8IUD6 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
RNF135Q8IUD6 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
RNF135Q8IUD6 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
RNF135Q8IUD6 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
RNF135Q8IUD6 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC23.58■■□□□ 1.36
RNF135Q8IUD6 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC23.58■■□□□ 1.36
RNF135Q8IUD6 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
RNF135Q8IUD6 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC23.58■■□□□ 1.36
RNF135Q8IUD6 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
RNF135Q8IUD6 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
RNF135Q8IUD6 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
RNF135Q8IUD6 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC23.57■■□□□ 1.36
RNF135Q8IUD6 STK32C-205ENST00000456004 607 ntTSL 2 BASIC23.57■■□□□ 1.36
RNF135Q8IUD6 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC23.57■■□□□ 1.36
RNF135Q8IUD6 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC23.57■■□□□ 1.36
RNF135Q8IUD6 TERF1P2-201ENST00000583350 1212 ntBASIC23.57■■□□□ 1.36
RNF135Q8IUD6 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC23.57■■□□□ 1.36
RNF135Q8IUD6 HLA-L-211ENST00000482052 1765 ntBASIC23.57■■□□□ 1.36
RNF135Q8IUD6 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC23.57■■□□□ 1.36
RNF135Q8IUD6 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC23.56■■□□□ 1.36
RNF135Q8IUD6 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
RNF135Q8IUD6 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC23.56■■□□□ 1.36
RNF135Q8IUD6 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
RNF135Q8IUD6 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC23.56■■□□□ 1.36
RNF135Q8IUD6 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC23.56■■□□□ 1.36
RNF135Q8IUD6 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC23.56■■□□□ 1.36
RNF135Q8IUD6 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
RNF135Q8IUD6 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC23.56■■□□□ 1.36
RNF135Q8IUD6 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC23.56■■□□□ 1.36
RNF135Q8IUD6 TMEM191A-211ENST00000637163 1067 ntBASIC23.56■■□□□ 1.36
RNF135Q8IUD6 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC23.56■■□□□ 1.36
RNF135Q8IUD6 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
RNF135Q8IUD6 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC23.55■■□□□ 1.36
RNF135Q8IUD6 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
RNF135Q8IUD6 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
RNF135Q8IUD6 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC23.55■■□□□ 1.36
RNF135Q8IUD6 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC23.55■■□□□ 1.36
RNF135Q8IUD6 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC23.55■■□□□ 1.36
RNF135Q8IUD6 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC23.55■■□□□ 1.36
RNF135Q8IUD6 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC23.55■■□□□ 1.36
RNF135Q8IUD6 IGHV3-19-201ENST00000521488 291 ntBASIC23.55■■□□□ 1.36
RNF135Q8IUD6 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC23.55■■□□□ 1.36
RNF135Q8IUD6 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
RNF135Q8IUD6 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC23.55■■□□□ 1.36
RNF135Q8IUD6 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
RNF135Q8IUD6 TMEM202-AS1-202ENST00000565181 2325 ntBASIC23.55■■□□□ 1.36
RNF135Q8IUD6 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
RNF135Q8IUD6 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
RNF135Q8IUD6 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC23.54■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms