Protein–RNA interactions for Protein: P62312

LSM6, U6 snRNA-associated Sm-like protein LSm6, humanhuman

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P62312 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LSM6P62312 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
LSM6P62312 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC19.6■□□□□ 0.73
LSM6P62312 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC19.6■□□□□ 0.73
LSM6P62312 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC19.6■□□□□ 0.73
LSM6P62312 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
LSM6P62312 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC19.6■□□□□ 0.73
LSM6P62312 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
LSM6P62312 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
LSM6P62312 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
LSM6P62312 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LSM6P62312 ASB1-202ENST00000409297 878 ntTSL 5 BASIC19.59■□□□□ 0.73
LSM6P62312 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
LSM6P62312 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC19.59■□□□□ 0.73
LSM6P62312 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
LSM6P62312 DUX4L4-201ENST00000566884 1269 ntBASIC19.59■□□□□ 0.73
LSM6P62312 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LSM6P62312 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
LSM6P62312 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LSM6P62312 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
LSM6P62312 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
LSM6P62312 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
LSM6P62312 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
LSM6P62312 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC19.58■□□□□ 0.73
LSM6P62312 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC19.58■□□□□ 0.73
LSM6P62312 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC19.58■□□□□ 0.73
LSM6P62312 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
LSM6P62312 KRT16P3-201ENST00000439127 1283 ntBASIC19.58■□□□□ 0.72
LSM6P62312 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC19.58■□□□□ 0.72
LSM6P62312 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC19.58■□□□□ 0.72
LSM6P62312 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.72
LSM6P62312 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
LSM6P62312 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC19.58■□□□□ 0.72
LSM6P62312 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
LSM6P62312 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
LSM6P62312 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LSM6P62312 GALC-202ENST00000393568 2054 ntTSL 2 BASIC19.57■□□□□ 0.72
LSM6P62312 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
LSM6P62312 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LSM6P62312 GUSBP5-201ENST00000418136 578 ntBASIC19.57■□□□□ 0.72
LSM6P62312 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC19.57■□□□□ 0.72
LSM6P62312 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
LSM6P62312 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
LSM6P62312 TRIR-205ENST00000592273 783 ntTSL 3 BASIC19.57■□□□□ 0.72
LSM6P62312 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
LSM6P62312 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
LSM6P62312 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
LSM6P62312 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LSM6P62312 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC19.56■□□□□ 0.72
LSM6P62312 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC19.56■□□□□ 0.72
LSM6P62312 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC19.56■□□□□ 0.72
LSM6P62312 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC19.56■□□□□ 0.72
LSM6P62312 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
LSM6P62312 C1orf229-201ENST00000623686 2258 ntBASIC19.56■□□□□ 0.72
LSM6P62312 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
LSM6P62312 C17orf82-201ENST00000623772 1530 ntBASIC19.56■□□□□ 0.72
LSM6P62312 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
LSM6P62312 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC19.55■□□□□ 0.72
LSM6P62312 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
LSM6P62312 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC19.55■□□□□ 0.72
LSM6P62312 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
LSM6P62312 NKILA-201ENST00000613231 537 ntTSL 4 BASIC19.55■□□□□ 0.72
LSM6P62312 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LSM6P62312 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LSM6P62312 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LSM6P62312 ESRRAP2-201ENST00000418437 1549 ntBASIC19.55■□□□□ 0.72
LSM6P62312 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LSM6P62312 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
LSM6P62312 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
LSM6P62312 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
LSM6P62312 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC19.54■□□□□ 0.72
LSM6P62312 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
LSM6P62312 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
LSM6P62312 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC19.54■□□□□ 0.72
LSM6P62312 AC009086.3-201ENST00000623486 1008 ntBASIC19.54■□□□□ 0.72
LSM6P62312 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LSM6P62312 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LSM6P62312 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LSM6P62312 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
LSM6P62312 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC19.53■□□□□ 0.72
LSM6P62312 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC19.53■□□□□ 0.72
LSM6P62312 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC19.53■□□□□ 0.72
LSM6P62312 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC19.53■□□□□ 0.72
LSM6P62312 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC19.53■□□□□ 0.72
LSM6P62312 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC19.53■□□□□ 0.72
LSM6P62312 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
LSM6P62312 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
LSM6P62312 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
LSM6P62312 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
LSM6P62312 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
LSM6P62312 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
LSM6P62312 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
LSM6P62312 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
LSM6P62312 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC19.52■□□□□ 0.72
LSM6P62312 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
LSM6P62312 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC19.52■□□□□ 0.72
LSM6P62312 AL117332.1-201ENST00000622628 974 ntBASIC19.52■□□□□ 0.72
LSM6P62312 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
LSM6P62312 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
LSM6P62312 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms